RNA–Protein interactions for RNA: ENST00000448223.6

SMC6-207, Transcript of structural maintenance of chromosomes 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC6, Length 5,233 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-207ENST00000448223 FTCDO95954 541 aa9.82□□□□□ -0.84
SMC6-207ENST00000448223 LDHBP07195 334 aaKnown RBP9.82□□□□□ -0.84
SMC6-207ENST00000448223 ACTN1P12814 892 aa9.82□□□□□ -0.84
SMC6-207ENST00000448223 SERPINB8P50452 374 aa9.82□□□□□ -0.84
SMC6-207ENST00000448223 ADARP55265 1226 aaKnown RBP9.82□□□□□ -0.84
SMC6-207ENST00000448223 TMPRSS15P98073 1019 aa9.82□□□□□ -0.84
SMC6-207ENST00000448223 KRT76Q01546 638 aa9.82□□□□□ -0.84
SMC6-207ENST00000448223 DR1Q01658 176 aa9.82□□□□□ -0.84
SMC6-207ENST00000448223 USP17L2Q6R6M4 530 aa9.82□□□□□ -0.84
SMC6-207ENST00000448223 TRPM8Q7Z2W7 1104 aa9.82□□□□□ -0.84
SMC6-207ENST00000448223 FAM96AQ9H5X1 160 aa9.82□□□□□ -0.84
SMC6-207ENST00000448223 KCND1Q9NSA2 647 aa9.82□□□□□ -0.84
SMC6-207ENST00000448223 ABHD10Q9NUJ1 306 aa9.82□□□□□ -0.84
SMC6-207ENST00000448223 DUSP10Q9Y6W6 482 aa9.82□□□□□ -0.84
SMC6-207ENST00000448223 ZNF839A8K0R7 811 aa9.82□□□□□ -0.84
SMC6-207ENST00000448223 NFIBO00712 420 aa9.82□□□□□ -0.84
SMC6-207ENST00000448223 SEC24DO94855 1032 aaPredicted RBP9.82□□□□□ -0.84
SMC6-207ENST00000448223 GYPCP04921 128 aa9.82□□□□□ -0.84
SMC6-207ENST00000448223 LSP1P33241 339 aa9.82□□□□□ -0.84
SMC6-207ENST00000448223 NR1H3Q13133 447 aa9.82□□□□□ -0.84
SMC6-207ENST00000448223 KRR1Q13601 381 aaKnown RBP9.82□□□□□ -0.84
SMC6-207ENST00000448223 HIC1Q14526 733 aa9.82□□□□□ -0.84
SMC6-207ENST00000448223 DCLK2Q8N568 766 aa9.82□□□□□ -0.84
SMC6-207ENST00000448223 DDI1Q8WTU0 396 aa9.82□□□□□ -0.84
SMC6-207ENST00000448223 MPP4Q96JB8 637 aa9.82□□□□□ -0.84
SMC6-207ENST00000448223 ESYT3A0FGR9 886 aa9.82□□□□□ -0.84
SMC6-207ENST00000448223 TBKBP1A7MCY6 615 aa9.82□□□□□ -0.84
SMC6-207ENST00000448223 RASA4BC9J798 803 aa9.82□□□□□ -0.84
SMC6-207ENST00000448223 CCDC188H7C350 402 aa9.82□□□□□ -0.84
SMC6-207ENST00000448223 RASA4O43374 803 aa9.82□□□□□ -0.84
SMC6-207ENST00000448223 GTPBP6O43824 516 aaPredicted RBP9.82□□□□□ -0.84
SMC6-207ENST00000448223 ATP1A1P05023 1023 aaKnown RBP9.82□□□□□ -0.84
SMC6-207ENST00000448223 ATP6V1B1P15313 513 aa9.82□□□□□ -0.84
SMC6-207ENST00000448223 VCPP55072 806 aaKnown RBP9.82□□□□□ -0.84
SMC6-207ENST00000448223 EPM2AIP1Q7L775 607 aaPredicted RBP9.82□□□□□ -0.84
SMC6-207ENST00000448223 ADGRA1Q86SQ6 560 aa9.82□□□□□ -0.84
SMC6-207ENST00000448223 LUZP2Q86TE4 346 aa9.82□□□□□ -0.84
SMC6-207ENST00000448223 SRBD1Q8N5C6 995 aaKnown RBP9.82□□□□□ -0.84
SMC6-207ENST00000448223 QKIQ96PU8 341 aaKnown RBP eCLIP9.82□□□□□ -0.845e-7■■■■□ 22.3
SMC6-207ENST00000448223 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.82□□□□□ -0.848e-7■□□□□ 11
SMC6-207ENST00000448223 AGPAT5Q9NUQ2 364 aa9.82□□□□□ -0.84
SMC6-207ENST00000448223 OVOS2A0A0G2JMS6 1433 aa9.82□□□□□ -0.84
SMC6-207ENST00000448223 CCT8L1PA6NM43 557 aa9.81□□□□□ -0.84
SMC6-207ENST00000448223 RASSF9O75901 435 aa9.81□□□□□ -0.84
SMC6-207ENST00000448223 ZC3H12BQ5HYM0 836 aaKnown RBP9.81□□□□□ -0.84
SMC6-207ENST00000448223 TMTC4Q5T4D3 741 aa9.81□□□□□ -0.84
SMC6-207ENST00000448223 SGMS1Q86VZ5 419 aa9.81□□□□□ -0.84
SMC6-207ENST00000448223 LRRC47Q8N1G4 583 aaKnown RBP9.81□□□□□ -0.84
SMC6-207ENST00000448223 GINS4Q9BRT9 223 aa9.81□□□□□ -0.84
SMC6-207ENST00000448223 BEGAINQ9BUH8 593 aa9.81□□□□□ -0.84
SMC6-207ENST00000448223 AZI2Q9H6S1 392 aa9.81□□□□□ -0.84
SMC6-207ENST00000448223 SLC38A10Q9HBR0 1119 aa9.81□□□□□ -0.84
SMC6-207ENST00000448223 GGT7Q9UJ14 662 aa9.81□□□□□ -0.84
SMC6-207ENST00000448223 SMCO2A6NFE2 343 aa9.81□□□□□ -0.84
SMC6-207ENST00000448223 C16orf96A6NNT2 1141 aa9.81□□□□□ -0.84
SMC6-207ENST00000448223 TAF4O00268 1085 aa9.81□□□□□ -0.84
SMC6-207ENST00000448223 XPO1O14980 1071 aaKnown RBP9.81□□□□□ -0.84
SMC6-207ENST00000448223 NCK2O43639 380 aa9.81□□□□□ -0.84
SMC6-207ENST00000448223 ARPC4P59998 168 aa9.81□□□□□ -0.84
SMC6-207ENST00000448223 NR1I3Q14994 352 aa9.81□□□□□ -0.84
SMC6-207ENST00000448223 KCTD21Q4G0X4 260 aa9.81□□□□□ -0.84
SMC6-207ENST00000448223 RASGRP2Q7LDG7 609 aa9.81□□□□□ -0.84
SMC6-207ENST00000448223 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.81□□□□□ -0.84
SMC6-207ENST00000448223 CELF1Q92879 486 aaKnown RBP9.81□□□□□ -0.84
SMC6-207ENST00000448223 GJA10Q969M2 543 aa9.81□□□□□ -0.84
SMC6-207ENST00000448223 NMD3Q96D46 503 aaKnown RBP9.81□□□□□ -0.84
SMC6-207ENST00000448223 CNOT6LQ96LI5 555 aaKnown RBP9.81□□□□□ -0.84
SMC6-207ENST00000448223 RPAP3Q9H6T3 665 aaPredicted RBP9.81□□□□□ -0.84
SMC6-207ENST00000448223 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.81□□□□□ -0.84
SMC6-207ENST00000448223 R3HDM2Q9Y2K5 976 aaKnown RBP9.81□□□□□ -0.84
SMC6-207ENST00000448223 KLRF2D3W0D1 207 aa9.81□□□□□ -0.84
SMC6-207ENST00000448223 IPO5O00410 1097 aaKnown RBP9.81□□□□□ -0.84
SMC6-207ENST00000448223 SAT1P21673 171 aa9.81□□□□□ -0.84
SMC6-207ENST00000448223 UBE3AQ05086 875 aa9.81□□□□□ -0.84
SMC6-207ENST00000448223 R3HDM1Q15032 1099 aaKnown RBP9.81□□□□□ -0.84
SMC6-207ENST00000448223 LRRC31Q6UY01 552 aa9.81□□□□□ -0.84
SMC6-207ENST00000448223 LRP10Q7Z4F1 713 aa9.81□□□□□ -0.84
SMC6-207ENST00000448223 CYFIP2Q96F07 1278 aa9.81□□□□□ -0.84
SMC6-207ENST00000448223 BTBD6Q96KE9 485 aa9.81□□□□□ -0.84
SMC6-207ENST00000448223 MLXIPQ9HAP2 919 aa9.81□□□□□ -0.84
SMC6-207ENST00000448223 MLXIPLQ9NP71 852 aa9.81□□□□□ -0.84
SMC6-207ENST00000448223 BSDC1Q9NW68 430 aaPredicted RBP9.81□□□□□ -0.84
SMC6-207ENST00000448223 USP15Q9Y4E8 981 aaPredicted RBP9.81□□□□□ -0.84
SMC6-207ENST00000448223 IGF2BP3O00425 579 aaKnown RBP eCLIP9.81□□□□□ -0.84
SMC6-207ENST00000448223 GNPATO15228 680 aa9.81□□□□□ -0.84
SMC6-207ENST00000448223 AHCYL1O43865 530 aa9.81□□□□□ -0.84
SMC6-207ENST00000448223 CCDC22O60826 627 aa9.81□□□□□ -0.84
SMC6-207ENST00000448223 FAM107AO95990 144 aa9.81□□□□□ -0.84
SMC6-207ENST00000448223 VIL1P09327 827 aaKnown RBP9.81□□□□□ -0.84
SMC6-207ENST00000448223 MARK3P27448 753 aa9.81□□□□□ -0.84
SMC6-207ENST00000448223 SGO2Q562F6 1265 aa9.81□□□□□ -0.84
SMC6-207ENST00000448223 RINT1Q6NUQ1 792 aa9.81□□□□□ -0.84
SMC6-207ENST00000448223 TMED8Q6PL24 325 aaPredicted RBP9.81□□□□□ -0.84
SMC6-207ENST00000448223 BRINP3Q76B58 766 aa9.81□□□□□ -0.84
SMC6-207ENST00000448223 TMC4Q7Z404 712 aa9.81□□□□□ -0.84
SMC6-207ENST00000448223 SRRM1Q8IYB3 904 aaKnown RBP9.81□□□□□ -0.84
SMC6-207ENST00000448223 TTC17Q96AE7 1141 aa9.81□□□□□ -0.84
SMC6-207ENST00000448223 ADD3Q9UEY8 706 aaKnown RBP9.81□□□□□ -0.84
SMC6-207ENST00000448223 NFAT5O94916 1531 aa9.81□□□□□ -0.84
SMC6-207ENST00000448223 KDM3BQ7LBC6 1761 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms