RNA–Protein interactions for RNA: ENST00000447745.5

CTDSPL-207, Transcript of CTD small phosphatase like, humanhuman

TSL 3

Gene CTDSPL, Length 793 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL-207ENST00000447745 AGPAT5Q9NUQ2 364 aa11.23□□□□□ -0.61
CTDSPL-207ENST00000447745 RNF19AQ9NV58 838 aa11.23□□□□□ -0.61
CTDSPL-207ENST00000447745 MRPL42Q9Y6G3 142 aaKnown RBP11.23□□□□□ -0.61
CTDSPL-207ENST00000447745 PRUNE2Q8WUY3 3088 aa11.23□□□□□ -0.61
CTDSPL-207ENST00000447745 LRRIQ4A6NIV6 560 aa11.22□□□□□ -0.61
CTDSPL-207ENST00000447745 H3BNC9 293 aa11.22□□□□□ -0.61
CTDSPL-207ENST00000447745 SKIP12755 728 aa11.22□□□□□ -0.61
CTDSPL-207ENST00000447745 MARCKSP29966 332 aaPredicted RBP11.22□□□□□ -0.61
CTDSPL-207ENST00000447745 HOXA11P31270 313 aaPredicted RBP11.22□□□□□ -0.61
CTDSPL-207ENST00000447745 CTNNB1P35222 781 aa11.22□□□□□ -0.61
CTDSPL-207ENST00000447745 LONP1P36776 959 aaKnown RBP11.22□□□□□ -0.61
CTDSPL-207ENST00000447745 UBA7P41226 1012 aa11.22□□□□□ -0.61
CTDSPL-207ENST00000447745 GRIN1Q05586 938 aa11.22□□□□□ -0.61
CTDSPL-207ENST00000447745 NCBP1Q09161 790 aaKnown RBP11.22□□□□□ -0.61
CTDSPL-207ENST00000447745 COL4A6Q14031 1691 aa11.22□□□□□ -0.61
CTDSPL-207ENST00000447745 MICALL1Q8N3F8 863 aa11.22□□□□□ -0.61
CTDSPL-207ENST00000447745 BSNDQ8WZ55 320 aa11.22□□□□□ -0.61
CTDSPL-207ENST00000447745 CDK5RAP3Q96JB5 506 aa11.22□□□□□ -0.61
CTDSPL-207ENST00000447745 CASD1Q96PB1 797 aa11.22□□□□□ -0.61
CTDSPL-207ENST00000447745 NFKBIZQ9BYH8 718 aa11.22□□□□□ -0.61
CTDSPL-207ENST00000447745 TMEM117Q9H0C3 514 aa11.22□□□□□ -0.61
CTDSPL-207ENST00000447745 NT5C3AQ9H0P0 336 aa11.22□□□□□ -0.61
CTDSPL-207ENST00000447745 FAM105AQ9NUU6 356 aa11.22□□□□□ -0.61
CTDSPL-207ENST00000447745 LMCD1Q9NZU5 365 aa11.22□□□□□ -0.61
CTDSPL-207ENST00000447745 DAXXQ9UER7 740 aaPredicted RBP11.22□□□□□ -0.61
CTDSPL-207ENST00000447745 RWDD3Q9Y3V2 267 aa11.22□□□□□ -0.61
CTDSPL-207ENST00000447745 REV3LO60673 3130 aa11.21□□□□□ -0.61
CTDSPL-207ENST00000447745 C5orf67F2Z3F1 127 aa11.21□□□□□ -0.61
CTDSPL-207ENST00000447745 HOXA2O43364 376 aa11.21□□□□□ -0.61
CTDSPL-207ENST00000447745 SLC26A4O43511 780 aa11.21□□□□□ -0.61
CTDSPL-207ENST00000447745 TSPAN1O60635 241 aa11.21□□□□□ -0.61
CTDSPL-207ENST00000447745 ZNF623O75123 536 aa11.21□□□□□ -0.61
CTDSPL-207ENST00000447745 ERLIN2O94905 339 aa11.21□□□□□ -0.61
CTDSPL-207ENST00000447745 SSBP05455 408 aaKnown RBP eCLIP11.21□□□□□ -0.61
CTDSPL-207ENST00000447745 PDIA4P13667 645 aaKnown RBP11.21□□□□□ -0.61
CTDSPL-207ENST00000447745 ATF7P17544 494 aaPredicted RBP11.21□□□□□ -0.61
CTDSPL-207ENST00000447745 AXLP30530 894 aa11.21□□□□□ -0.61
CTDSPL-207ENST00000447745 MBTD1Q05BQ5 628 aa11.21□□□□□ -0.61
CTDSPL-207ENST00000447745 PCBP1Q15365 356 aaKnown RBP eCLIP11.21□□□□□ -0.619e-6■■■■■ 29.7
CTDSPL-207ENST00000447745 AMHR2Q16671 573 aa11.21□□□□□ -0.61
CTDSPL-207ENST00000447745 LONRF3Q496Y0 759 aa11.21□□□□□ -0.61
CTDSPL-207ENST00000447745 CLLU1OSQ5K130 101 aa11.21□□□□□ -0.61
CTDSPL-207ENST00000447745 UBXN11Q5T124 520 aa11.21□□□□□ -0.61
CTDSPL-207ENST00000447745 SPOUT1Q5T280 376 aaKnown RBP11.21□□□□□ -0.61
CTDSPL-207ENST00000447745 FOXD4L5Q5VV16 416 aaPredicted RBP11.21□□□□□ -0.61
CTDSPL-207ENST00000447745 RINT1Q6NUQ1 792 aa11.21□□□□□ -0.61
CTDSPL-207ENST00000447745 C1orf186Q6ZWK4 172 aa11.21□□□□□ -0.61
CTDSPL-207ENST00000447745 ZBTB8OSQ8IWT0 167 aa11.21□□□□□ -0.61
CTDSPL-207ENST00000447745 KCTD17Q8N5Z5 321 aa11.21□□□□□ -0.61
CTDSPL-207ENST00000447745 SLC17A8Q8NDX2 589 aa11.21□□□□□ -0.61
CTDSPL-207ENST00000447745 FOXD4L4Q8WXT5 416 aaPredicted RBP11.21□□□□□ -0.61
CTDSPL-207ENST00000447745 LPPQ93052 612 aa11.21□□□□□ -0.61
CTDSPL-207ENST00000447745 CALML4Q96GE6 196 aa11.21□□□□□ -0.61
CTDSPL-207ENST00000447745 CPB2Q96IY4 423 aa11.21□□□□□ -0.61
CTDSPL-207ENST00000447745 USP28Q96RU2 1077 aa11.21□□□□□ -0.61
CTDSPL-207ENST00000447745 TYW1Q9NV66 732 aaKnown RBP11.21□□□□□ -0.61
CTDSPL-207ENST00000447745 TFIP11Q9UBB9 837 aaKnown RBP11.21□□□□□ -0.61
CTDSPL-207ENST00000447745 PCDHB2Q9Y5E7 798 aa11.21□□□□□ -0.61
CTDSPL-207ENST00000447745 SRPRBQ9Y5M8 271 aaKnown RBP11.21□□□□□ -0.61
CTDSPL-207ENST00000447745 PRRC2BQ5JSZ5 2229 aaKnown RBP11.2□□□□□ -0.62
CTDSPL-207ENST00000447745 PLA2G4BP0C869 781 aa11.2□□□□□ -0.62
CTDSPL-207ENST00000447745 ZSCAN22P10073 491 aaPredicted RBP11.2□□□□□ -0.62
CTDSPL-207ENST00000447745 RAB27AP51159 221 aa11.2□□□□□ -0.62
CTDSPL-207ENST00000447745 SLC39A14Q15043 492 aa11.2□□□□□ -0.62
CTDSPL-207ENST00000447745 PPP2R5AQ15172 486 aa11.2□□□□□ -0.62
CTDSPL-207ENST00000447745 TMEM119Q4V9L6 283 aa11.2□□□□□ -0.62
CTDSPL-207ENST00000447745 CDCA2Q69YH5 1023 aaPredicted RBP11.2□□□□□ -0.62
CTDSPL-207ENST00000447745 NOTUMQ6P988 496 aa11.2□□□□□ -0.62
CTDSPL-207ENST00000447745 LRRC55Q6ZSA7 311 aa11.2□□□□□ -0.62
CTDSPL-207ENST00000447745 USP49Q70CQ1 688 aa11.2□□□□□ -0.62
CTDSPL-207ENST00000447745 MRPL10Q7Z7H8 261 aaKnown RBP11.2□□□□□ -0.62
CTDSPL-207ENST00000447745 ABI1Q8IZP0 508 aa11.2□□□□□ -0.62
CTDSPL-207ENST00000447745 SYT2Q8N9I0 419 aaPredicted RBP11.2□□□□□ -0.62
CTDSPL-207ENST00000447745 DEPTORQ8TB45 409 aa11.2□□□□□ -0.62
CTDSPL-207ENST00000447745 HELQQ8TDG4 1101 aa11.2□□□□□ -0.62
CTDSPL-207ENST00000447745 KIFAP3Q92845 792 aa11.2□□□□□ -0.62
CTDSPL-207ENST00000447745 IFT74Q96LB3 600 aa11.2□□□□□ -0.62
CTDSPL-207ENST00000447745 CLIC6Q96NY7 704 aa11.2□□□□□ -0.62
CTDSPL-207ENST00000447745 C11orf84Q9BUA3 381 aaPredicted RBP11.2□□□□□ -0.62
CTDSPL-207ENST00000447745 RUSC1Q9BVN2 902 aa11.2□□□□□ -0.62
CTDSPL-207ENST00000447745 PLVAPQ9BX97 442 aa11.2□□□□□ -0.62
CTDSPL-207ENST00000447745 CSRNP2Q9H175 543 aa11.2□□□□□ -0.62
CTDSPL-207ENST00000447745 C2orf40Q9H1Z8 148 aa11.2□□□□□ -0.62
CTDSPL-207ENST00000447745 FZD8Q9H461 694 aa11.2□□□□□ -0.62
CTDSPL-207ENST00000447745 CWH43Q9H720 699 aa11.2□□□□□ -0.62
CTDSPL-207ENST00000447745 PRMT7Q9NVM4 692 aaPredicted RBP11.2□□□□□ -0.62
CTDSPL-207ENST00000447745 HCSTQ9UBK5 93 aa11.2□□□□□ -0.62
CTDSPL-207ENST00000447745 FBXO2Q9UK22 296 aaPredicted RBP11.2□□□□□ -0.62
CTDSPL-207ENST00000447745 A0A0C4DFX4 3053 aa11.2□□□□□ -0.62
CTDSPL-207ENST00000447745 FNDC1Q4ZHG4 1894 aaPredicted RBP11.19□□□□□ -0.62
CTDSPL-207ENST00000447745 A0A1B0GUA9 196 aa11.19□□□□□ -0.62
CTDSPL-207ENST00000447745 MEIS3P2A8K0S8 358 aa11.19□□□□□ -0.62
CTDSPL-207ENST00000447745 SFI1A8K8P3 1242 aa11.19□□□□□ -0.62
CTDSPL-207ENST00000447745 GRM6O15303 877 aa11.19□□□□□ -0.62
CTDSPL-207ENST00000447745 B4GALT5O43286 388 aa11.19□□□□□ -0.62
CTDSPL-207ENST00000447745 HIP1RO75146 1068 aa11.19□□□□□ -0.62
CTDSPL-207ENST00000447745 ARF4P18085 180 aaPredicted RBP11.19□□□□□ -0.62
CTDSPL-207ENST00000447745 GUCY2CP25092 1073 aa11.19□□□□□ -0.62
CTDSPL-207ENST00000447745 NAMPTP43490 491 aa11.19□□□□□ -0.62
CTDSPL-207ENST00000447745 NASPP49321 788 aaPredicted RBP11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms