RNA–Protein interactions for RNA: ENST00000446876.1

HDAC4-204, Transcript of histone deacetylase 4, humanhuman

TSL 4

Gene HDAC4, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-204ENST00000446876 TSPAN1O60635 241 aa16.44■□□□□ 0.22
HDAC4-204ENST00000446876 SSBP05455 408 aaKnown RBP eCLIP16.44■□□□□ 0.22
HDAC4-204ENST00000446876 HOXA11P31270 313 aaPredicted RBP16.44■□□□□ 0.22
HDAC4-204ENST00000446876 CCDC85BQ15834 202 aaPredicted RBP16.44■□□□□ 0.22
HDAC4-204ENST00000446876 USP49Q70CQ1 688 aa16.44■□□□□ 0.22
HDAC4-204ENST00000446876 ZNF598Q86UK7 904 aaKnown RBP16.44■□□□□ 0.22
HDAC4-204ENST00000446876 LPPQ93052 612 aa16.44■□□□□ 0.22
HDAC4-204ENST00000446876 CPB2Q96IY4 423 aa16.44■□□□□ 0.22
HDAC4-204ENST00000446876 CDK5RAP3Q96JB5 506 aa16.44■□□□□ 0.22
HDAC4-204ENST00000446876 AK8Q96MA6 479 aa16.44■□□□□ 0.22
HDAC4-204ENST00000446876 CLIC6Q96NY7 704 aa16.44■□□□□ 0.22
HDAC4-204ENST00000446876 KIFC3Q9BVG8 833 aa16.44■□□□□ 0.22
HDAC4-204ENST00000446876 CSRNP2Q9H175 543 aa16.44■□□□□ 0.22
HDAC4-204ENST00000446876 ELAC1Q9H777 363 aaKnown RBP16.44■□□□□ 0.22
HDAC4-204ENST00000446876 CHST12Q9NRB3 414 aa16.44■□□□□ 0.22
HDAC4-204ENST00000446876 DACT1Q9NYF0 836 aa16.44■□□□□ 0.22
HDAC4-204ENST00000446876 A0A0U1RQF3 1178 aa16.43■□□□□ 0.22
HDAC4-204ENST00000446876 MEIS3P2A8K0S8 358 aa16.43■□□□□ 0.22
HDAC4-204ENST00000446876 B4GALT5O43286 388 aa16.43■□□□□ 0.22
HDAC4-204ENST00000446876 ERLIN2O94905 339 aa16.43■□□□□ 0.22
HDAC4-204ENST00000446876 ZSCAN22P10073 491 aaPredicted RBP16.43■□□□□ 0.22
HDAC4-204ENST00000446876 LONP1P36776 959 aaKnown RBP16.43■□□□□ 0.22
HDAC4-204ENST00000446876 UBA7P41226 1012 aa16.43■□□□□ 0.22
HDAC4-204ENST00000446876 RAD51AP2Q09MP3 1159 aa16.43■□□□□ 0.22
HDAC4-204ENST00000446876 KARSQ15046 597 aaKnown RBP16.43■□□□□ 0.22
HDAC4-204ENST00000446876 AMHR2Q16671 573 aa16.43■□□□□ 0.22
HDAC4-204ENST00000446876 CLLU1OSQ5K130 101 aa16.43■□□□□ 0.22
HDAC4-204ENST00000446876 RINT1Q6NUQ1 792 aa16.43■□□□□ 0.22
HDAC4-204ENST00000446876 FAM43BQ6ZT52 329 aaPredicted RBP16.43■□□□□ 0.22
HDAC4-204ENST00000446876 IFNLR1Q8IU57 520 aaPredicted RBP16.43■□□□□ 0.22
HDAC4-204ENST00000446876 HELQQ8TDG4 1101 aa16.43■□□□□ 0.22
HDAC4-204ENST00000446876 FAM105AQ9NUU6 356 aa16.43■□□□□ 0.22
HDAC4-204ENST00000446876 TFIP11Q9UBB9 837 aaKnown RBP16.43■□□□□ 0.22
HDAC4-204ENST00000446876 MTCH2Q9Y6C9 303 aa16.43■□□□□ 0.22
HDAC4-204ENST00000446876 PLXNA4Q9HCM2 1894 aa16.43■□□□□ 0.22
HDAC4-204ENST00000446876 TRANK1O15050 2925 aa16.42■□□□□ 0.22
HDAC4-204ENST00000446876 HIP1RO75146 1068 aa16.42■□□□□ 0.22
HDAC4-204ENST00000446876 CSPG5O95196 566 aa16.42■□□□□ 0.22
HDAC4-204ENST00000446876 F13A1P00488 732 aa16.42■□□□□ 0.22
HDAC4-204ENST00000446876 PLCG1P19174 1290 aa16.42■□□□□ 0.22
HDAC4-204ENST00000446876 POU5F1BQ06416 359 aa16.42■□□□□ 0.22
HDAC4-204ENST00000446876 UBXN11Q5T124 520 aa16.42■□□□□ 0.22
HDAC4-204ENST00000446876 C1orf186Q6ZWK4 172 aa16.42■□□□□ 0.22
HDAC4-204ENST00000446876 CDR2LQ86X02 465 aaPredicted RBP16.42■□□□□ 0.22
HDAC4-204ENST00000446876 DAW1Q8N136 415 aa16.42■□□□□ 0.22
HDAC4-204ENST00000446876 CLP1Q92989 425 aaKnown RBP16.42■□□□□ 0.22
HDAC4-204ENST00000446876 EPSTI1Q96J88 318 aa16.42■□□□□ 0.22
HDAC4-204ENST00000446876 SAMD11Q96NU1 681 aa16.42■□□□□ 0.22
HDAC4-204ENST00000446876 CASD1Q96PB1 797 aa16.42■□□□□ 0.22
HDAC4-204ENST00000446876 NT5C3AQ9H0P0 336 aa16.42■□□□□ 0.22
HDAC4-204ENST00000446876 USP20Q9Y2K6 914 aa16.42■□□□□ 0.22
HDAC4-204ENST00000446876 NPHP3-ACAD11A0A0J9YXS1 232 aa16.41■□□□□ 0.22
HDAC4-204ENST00000446876 TTLL13PA6NNM8 815 aa16.41■□□□□ 0.22
HDAC4-204ENST00000446876 GTPBP6O43824 516 aaPredicted RBP16.41■□□□□ 0.22
HDAC4-204ENST00000446876 EDN1P05305 212 aa16.41■□□□□ 0.22
HDAC4-204ENST00000446876 PLA2G4BP0C869 781 aa16.41■□□□□ 0.22
HDAC4-204ENST00000446876 ARF4P18085 180 aaPredicted RBP16.41■□□□□ 0.22
HDAC4-204ENST00000446876 LIG1P18858 919 aa16.41■□□□□ 0.22
HDAC4-204ENST00000446876 BMPR1AP36894 532 aa16.41■□□□□ 0.22
HDAC4-204ENST00000446876 NASPP49321 788 aaPredicted RBP16.41■□□□□ 0.22
HDAC4-204ENST00000446876 SLC12A3P55017 1021 aa16.41■□□□□ 0.22
HDAC4-204ENST00000446876 MAPK7Q13164 816 aa16.41■□□□□ 0.22
HDAC4-204ENST00000446876 GPM6BQ13491 265 aa16.41■□□□□ 0.22
HDAC4-204ENST00000446876 DHX8Q14562 1220 aaKnown RBP16.41■□□□□ 0.22
HDAC4-204ENST00000446876 SLC39A14Q15043 492 aa16.41■□□□□ 0.22
HDAC4-204ENST00000446876 CDCA2Q69YH5 1023 aaPredicted RBP16.41■□□□□ 0.22
HDAC4-204ENST00000446876 RASSF8Q8NHQ8 419 aa16.41■□□□□ 0.22
HDAC4-204ENST00000446876 SYMPKQ92797 1274 aaKnown RBP16.41■□□□□ 0.22
HDAC4-204ENST00000446876 CALML4Q96GE6 196 aa16.41■□□□□ 0.22
HDAC4-204ENST00000446876 EIF2AQ9BY44 585 aaKnown RBP16.41■□□□□ 0.22
HDAC4-204ENST00000446876 NFKBIZQ9BYH8 718 aa16.41■□□□□ 0.22
HDAC4-204ENST00000446876 TMEM117Q9H0C3 514 aa16.41■□□□□ 0.22
HDAC4-204ENST00000446876 PRDM6Q9NQX0 595 aa16.41■□□□□ 0.22
HDAC4-204ENST00000446876 RNF216Q9NWF9 866 aaPredicted RBP16.41■□□□□ 0.22
HDAC4-204ENST00000446876 PCDHB2Q9Y5E7 798 aa16.41■□□□□ 0.22
HDAC4-204ENST00000446876 SRPRBQ9Y5M8 271 aaKnown RBP16.41■□□□□ 0.22
HDAC4-204ENST00000446876 SFI1A8K8P3 1242 aa16.4■□□□□ 0.22
HDAC4-204ENST00000446876 H3BNC9 293 aa16.4■□□□□ 0.22
HDAC4-204ENST00000446876 NAMPTP43490 491 aa16.4■□□□□ 0.22
HDAC4-204ENST00000446876 CACNB1Q02641 598 aaPredicted RBP16.4■□□□□ 0.22
HDAC4-204ENST00000446876 STK38Q15208 465 aa16.4■□□□□ 0.22
HDAC4-204ENST00000446876 SPOUT1Q5T280 376 aaKnown RBP16.4■□□□□ 0.22
HDAC4-204ENST00000446876 LRRC55Q6ZSA7 311 aa16.4■□□□□ 0.22
HDAC4-204ENST00000446876 ZBTB8OSQ8IWT0 167 aa16.4■□□□□ 0.22
HDAC4-204ENST00000446876 ABI1Q8IZP0 508 aa16.4■□□□□ 0.22
HDAC4-204ENST00000446876 SYT2Q8N9I0 419 aaPredicted RBP16.4■□□□□ 0.22
HDAC4-204ENST00000446876 DEPTORQ8TB45 409 aa16.4■□□□□ 0.22
HDAC4-204ENST00000446876 KIFAP3Q92845 792 aa16.4■□□□□ 0.22
HDAC4-204ENST00000446876 IFT74Q96LB3 600 aa16.4■□□□□ 0.22
HDAC4-204ENST00000446876 ZNF396Q96N95 335 aaPredicted RBP16.4■□□□□ 0.22
HDAC4-204ENST00000446876 TRAIPQ9BWF2 469 aa16.4■□□□□ 0.22
HDAC4-204ENST00000446876 CWH43Q9H720 699 aa16.4■□□□□ 0.22
HDAC4-204ENST00000446876 BLOC1S4Q9NUP1 217 aa16.4■□□□□ 0.22
HDAC4-204ENST00000446876 TYW1Q9NV66 732 aaKnown RBP16.4■□□□□ 0.22
HDAC4-204ENST00000446876 DAXXQ9UER7 740 aaPredicted RBP16.4■□□□□ 0.22
HDAC4-204ENST00000446876 C5orf67F2Z3F1 127 aa16.39■□□□□ 0.21
HDAC4-204ENST00000446876 GRM6O15303 877 aa16.39■□□□□ 0.21
HDAC4-204ENST00000446876 HOXA2O43364 376 aa16.39■□□□□ 0.21
HDAC4-204ENST00000446876 EOMESO95936 686 aa16.39■□□□□ 0.21
HDAC4-204ENST00000446876 RAB27AP51159 221 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms