RNA–Protein interactions for RNA: ENST00000446851.6

LIN54-203, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 1 (best) BASIC

Gene LIN54, Length 4,083 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-203ENST00000446851 MAGEA10P43363 369 aaPredicted RBP11.3□□□□□ -0.6
LIN54-203ENST00000446851 PTK7Q13308 1070 aa11.3□□□□□ -0.6
LIN54-203ENST00000446851 SKIV2LQ15477 1246 aaKnown RBP11.3□□□□□ -0.6
LIN54-203ENST00000446851 SAAL1Q96ER3 474 aa11.3□□□□□ -0.6
LIN54-203ENST00000446851 PCDHA2Q9Y5H9 948 aa11.3□□□□□ -0.6
LIN54-203ENST00000446851 GPR182O15218 404 aa11.3□□□□□ -0.6
LIN54-203ENST00000446851 EXOC3O60645 756 aa11.3□□□□□ -0.6
LIN54-203ENST00000446851 ATG7O95352 703 aa11.3□□□□□ -0.6
LIN54-203ENST00000446851 ARMCX5Q6P1M9 558 aa11.3□□□□□ -0.6
LIN54-203ENST00000446851 TRIM9Q9C026 710 aa11.3□□□□□ -0.6
LIN54-203ENST00000446851 XPNPEP1Q9NQW7 623 aa11.3□□□□□ -0.6
LIN54-203ENST00000446851 NPTXRO95502 500 aa11.3□□□□□ -0.6
LIN54-203ENST00000446851 CAPSQ13938 189 aa11.3□□□□□ -0.6
LIN54-203ENST00000446851 SNX17Q15036 470 aa11.3□□□□□ -0.6
LIN54-203ENST00000446851 SERINC5Q86VE9 423 aa11.3□□□□□ -0.6
LIN54-203ENST00000446851 AFAP1L1Q8TED9 768 aa11.3□□□□□ -0.6
LIN54-203ENST00000446851 AGO3Q9H9G7 860 aaKnown RBP11.3□□□□□ -0.6
LIN54-203ENST00000446851 LMBRD1Q9NUN5 540 aa11.3□□□□□ -0.6
LIN54-203ENST00000446851 A0A1W2PQ27 194 aa11.3□□□□□ -0.6
LIN54-203ENST00000446851 A0A1W2PQ64 194 aa11.3□□□□□ -0.6
LIN54-203ENST00000446851 A0A1W2PQD8 194 aa11.3□□□□□ -0.6
LIN54-203ENST00000446851 GRXCR1A8MXD5 290 aa11.3□□□□□ -0.6
LIN54-203ENST00000446851 ACOT2P49753 483 aa11.3□□□□□ -0.6
LIN54-203ENST00000446851 COASYQ13057 564 aa11.3□□□□□ -0.6
LIN54-203ENST00000446851 KMT5BQ4FZB7 885 aa11.3□□□□□ -0.6
LIN54-203ENST00000446851 CAGE1Q8TC20 777 aa11.3□□□□□ -0.6
LIN54-203ENST00000446851 NOC4LQ9BVI4 516 aaKnown RBP11.3□□□□□ -0.6
LIN54-203ENST00000446851 TISP43B9A030 160 aa11.29□□□□□ -0.6
LIN54-203ENST00000446851 PHACTR2O75167 634 aa11.29□□□□□ -0.6
LIN54-203ENST00000446851 IQCF3P0C7M6 154 aa11.29□□□□□ -0.6
LIN54-203ENST00000446851 GPC3P51654 580 aa11.29□□□□□ -0.6
LIN54-203ENST00000446851 CCSAPQ6IQ19 270 aaPredicted RBP11.29□□□□□ -0.6
LIN54-203ENST00000446851 BSNDQ8WZ55 320 aa11.29□□□□□ -0.6
LIN54-203ENST00000446851 MSTO1Q9BUK6 570 aa11.29□□□□□ -0.6
LIN54-203ENST00000446851 PRG3Q9Y2Y8 225 aaPredicted RBP11.29□□□□□ -0.6
LIN54-203ENST00000446851 PCDHB7Q9Y5E2 793 aa11.29□□□□□ -0.6
LIN54-203ENST00000446851 SMIM35A0A1B0GVV1 85 aa11.29□□□□□ -0.6
LIN54-203ENST00000446851 YARSP54577 528 aaKnown RBP11.29□□□□□ -0.6
LIN54-203ENST00000446851 ZBTB45Q96K62 511 aaPredicted RBP11.29□□□□□ -0.6
LIN54-203ENST00000446851 POMCP01189 267 aa11.29□□□□□ -0.6
LIN54-203ENST00000446851 PLS3P13797 630 aa11.29□□□□□ -0.6
LIN54-203ENST00000446851 ITGB8P26012 769 aa11.29□□□□□ -0.6
LIN54-203ENST00000446851 KCNA1Q09470 495 aa11.29□□□□□ -0.6
LIN54-203ENST00000446851 PPIGQ13427 754 aaKnown RBP eCLIP11.29□□□□□ -0.6
LIN54-203ENST00000446851 GIT2Q14161 759 aa11.29□□□□□ -0.6
LIN54-203ENST00000446851 CCDC40Q4G0X9 1142 aa11.29□□□□□ -0.6
LIN54-203ENST00000446851 DCAF17Q5H9S7 520 aaPredicted RBP11.29□□□□□ -0.6
LIN54-203ENST00000446851 MARCH8Q5T0T0 291 aa11.29□□□□□ -0.6
LIN54-203ENST00000446851 CNNM4Q6P4Q7 775 aa11.29□□□□□ -0.6
LIN54-203ENST00000446851 HACE1Q8IYU2 909 aa11.29□□□□□ -0.6
LIN54-203ENST00000446851 GLIS3Q8NEA6 775 aa11.29□□□□□ -0.6
LIN54-203ENST00000446851 TTC16Q8NEE8 873 aa11.29□□□□□ -0.6
LIN54-203ENST00000446851 TMEM40Q8WWA1 233 aa11.29□□□□□ -0.6
LIN54-203ENST00000446851 OSBPL7Q9BZF2 842 aa11.29□□□□□ -0.6
LIN54-203ENST00000446851 MINDY3Q9H8M7 445 aa11.29□□□□□ -0.6
LIN54-203ENST00000446851 GTPBP6O43824 516 aaPredicted RBP11.28□□□□□ -0.6
LIN54-203ENST00000446851 CHRNA1P02708 482 aa11.28□□□□□ -0.6
LIN54-203ENST00000446851 IGFBP4P22692 258 aa11.28□□□□□ -0.6
LIN54-203ENST00000446851 RABGGTBP53611 331 aa11.28□□□□□ -0.6
LIN54-203ENST00000446851 BIRC3Q13489 604 aa11.28□□□□□ -0.6
LIN54-203ENST00000446851 LMBRD2Q68DH5 695 aaPredicted RBP11.28□□□□□ -0.6
LIN54-203ENST00000446851 TSG101Q99816 390 aa11.28□□□□□ -0.6
LIN54-203ENST00000446851 TLL1O43897 1013 aa11.28□□□□□ -0.6
LIN54-203ENST00000446851 TIMP1P01033 207 aa11.28□□□□□ -0.6
LIN54-203ENST00000446851 TNNI1P19237 187 aa11.28□□□□□ -0.6
LIN54-203ENST00000446851 NAALADL2Q58DX5 795 aa11.28□□□□□ -0.6
LIN54-203ENST00000446851 FNBP1Q96RU3 617 aa11.28□□□□□ -0.6
LIN54-203ENST00000446851 FAM213AQ9BRX8 229 aa11.28□□□□□ -0.6
LIN54-203ENST00000446851 NIFKQ9BYG3 293 aaKnown RBP11.28□□□□□ -0.6
LIN54-203ENST00000446851 DHX33Q9H6R0 707 aaKnown RBP11.28□□□□□ -0.6
LIN54-203ENST00000446851 RMND1Q9NWS8 449 aa11.28□□□□□ -0.6
LIN54-203ENST00000446851 DBR1Q9UK59 544 aaKnown RBP11.28□□□□□ -0.6
LIN54-203ENST00000446851 EXOC7Q9UPT5 735 aa11.28□□□□□ -0.6
LIN54-203ENST00000446851 TBKBP1A7MCY6 615 aa11.28□□□□□ -0.6
LIN54-203ENST00000446851 ASAP2O43150 1006 aa11.28□□□□□ -0.6
LIN54-203ENST00000446851 ZC3H11AO75152 810 aaKnown RBP eCLIP11.28□□□□□ -0.6
LIN54-203ENST00000446851 XRCC6P12956 609 aaKnown RBP eCLIP11.28□□□□□ -0.6
LIN54-203ENST00000446851 SLC12A3P55017 1021 aa11.28□□□□□ -0.6
LIN54-203ENST00000446851 TFAMQ00059 246 aaKnown RBP11.28□□□□□ -0.6
LIN54-203ENST00000446851 BTG3Q14201 252 aaPredicted RBP11.28□□□□□ -0.6
LIN54-203ENST00000446851 ATF7IP2Q5U623 682 aa11.28□□□□□ -0.6
LIN54-203ENST00000446851 C1orf186Q6ZWK4 172 aa11.28□□□□□ -0.6
LIN54-203ENST00000446851 GLYCTKQ8IVS8 523 aa11.28□□□□□ -0.6
LIN54-203ENST00000446851 HASPINQ8TF76 798 aa11.28□□□□□ -0.6
LIN54-203ENST00000446851 MRPL4Q9BYD3 311 aaKnown RBP11.28□□□□□ -0.6
LIN54-203ENST00000446851 CTNND2Q9UQB3 1225 aa11.28□□□□□ -0.6
LIN54-203ENST00000446851 FAM170AA1A519 330 aa11.27□□□□□ -0.6
LIN54-203ENST00000446851 PSMA7O14818 248 aa11.27□□□□□ -0.6
LIN54-203ENST00000446851 KIF20AO95235 890 aa11.27□□□□□ -0.6
LIN54-203ENST00000446851 PBX3P40426 434 aa11.27□□□□□ -0.6
LIN54-203ENST00000446851 STK4Q13043 487 aa11.27□□□□□ -0.6
LIN54-203ENST00000446851 DPH6Q7L8W6 267 aa11.27□□□□□ -0.6
LIN54-203ENST00000446851 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.27□□□□□ -0.61e-7■■■■□ 24.9
LIN54-203ENST00000446851 C2orf40Q9H1Z8 148 aa11.27□□□□□ -0.6
LIN54-203ENST00000446851 CRYBB1P53674 252 aaPredicted RBP11.27□□□□□ -0.61
LIN54-203ENST00000446851 ARSHQ5FYA8 562 aa11.27□□□□□ -0.61
LIN54-203ENST00000446851 NUB1Q9Y5A7 615 aa11.27□□□□□ -0.61
LIN54-203ENST00000446851 IGKV6D-21A0A0A0MT36 114 aa11.27□□□□□ -0.61
LIN54-203ENST00000446851 NT5C1B-RDH14C9J2C7 533 aa11.27□□□□□ -0.61
LIN54-203ENST00000446851 GOLGA6L19H0YKK7 550 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms