RNA–Protein interactions for RNA: ENST00000445866.6

SGCE-206, Transcript of sarcoglycan epsilon, humanhuman

TSL 5 BASIC

Gene SGCE, Length 1,666 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-206ENST00000445866 NLRP12P59046 1061 aa19.17■□□□□ 0.66
SGCE-206ENST00000445866 KIAA0895Q8NCT3 520 aa19.17■□□□□ 0.66
SGCE-206ENST00000445866 INO80BQ9C086 356 aaPredicted RBP19.17■□□□□ 0.66
SGCE-206ENST00000445866 ARHGAP28Q9P2N2 729 aa19.17■□□□□ 0.66
SGCE-206ENST00000445866 KIAA0100Q14667 2235 aaKnown RBP19.17■□□□□ 0.66
SGCE-206ENST00000445866 ADGRA3Q8IWK6 1321 aa19.16■□□□□ 0.66
SGCE-206ENST00000445866 CLTBP09497 229 aa19.16■□□□□ 0.66
SGCE-206ENST00000445866 EIF4BP23588 611 aaKnown RBP19.16■□□□□ 0.66
SGCE-206ENST00000445866 GTF2BQ00403 316 aa19.16■□□□□ 0.66
SGCE-206ENST00000445866 L1TD1Q5T7N2 865 aaKnown RBP19.16■□□□□ 0.66
SGCE-206ENST00000445866 SRGAP1Q7Z6B7 1085 aa19.16■□□□□ 0.66
SGCE-206ENST00000445866 MYOCDQ8IZQ8 938 aa19.16■□□□□ 0.66
SGCE-206ENST00000445866 NFKBIZQ9BYH8 718 aa19.16■□□□□ 0.66
SGCE-206ENST00000445866 HIPK3Q9H422 1215 aa19.16■□□□□ 0.66
SGCE-206ENST00000445866 ST6GALNAC4Q9H4F1 302 aa19.16■□□□□ 0.66
SGCE-206ENST00000445866 TMEM134Q9H6X4 195 aa19.16■□□□□ 0.66
SGCE-206ENST00000445866 MINDY3Q9H8M7 445 aa19.16■□□□□ 0.66
SGCE-206ENST00000445866 TBX20Q9UMR3 447 aa19.16■□□□□ 0.66
SGCE-206ENST00000445866 KIF20AO95235 890 aa19.15■□□□□ 0.66
SGCE-206ENST00000445866 DARSP14868 501 aaKnown RBP19.15■□□□□ 0.66
SGCE-206ENST00000445866 SELPP16109 830 aa19.15■□□□□ 0.66
SGCE-206ENST00000445866 SCP2P22307 547 aa19.15■□□□□ 0.66
SGCE-206ENST00000445866 ABCD1P33897 745 aa19.15■□□□□ 0.66
SGCE-206ENST00000445866 PRCPP42785 496 aa19.15■□□□□ 0.66
SGCE-206ENST00000445866 STRN3Q13033 797 aa19.15■□□□□ 0.66
SGCE-206ENST00000445866 ALCAMQ13740 583 aa19.15■□□□□ 0.66
SGCE-206ENST00000445866 MAPK6Q16659 721 aa19.15■□□□□ 0.66
SGCE-206ENST00000445866 FAM26DQ5JW98 314 aa19.15■□□□□ 0.66
SGCE-206ENST00000445866 CDCA2Q69YH5 1023 aaPredicted RBP19.15■□□□□ 0.66
SGCE-206ENST00000445866 MLKLQ8NB16 471 aa19.15■□□□□ 0.66
SGCE-206ENST00000445866 ZNF507Q8TCN5 953 aa19.15■□□□□ 0.66
SGCE-206ENST00000445866 SCFD1Q8WVM8 642 aa19.15■□□□□ 0.66
SGCE-206ENST00000445866 ACCSQ96QU6 501 aa19.15■□□□□ 0.66
SGCE-206ENST00000445866 NOC4LQ9BVI4 516 aaKnown RBP19.15■□□□□ 0.66
SGCE-206ENST00000445866 STRA6Q9BX79 667 aa19.15■□□□□ 0.66
SGCE-206ENST00000445866 ANO10Q9NW15 660 aa19.15■□□□□ 0.66
SGCE-206ENST00000445866 CCDC192P0DO97 292 aa19.14■□□□□ 0.66
SGCE-206ENST00000445866 TYRO3Q06418 890 aa19.14■□□□□ 0.66
SGCE-206ENST00000445866 MGAT3Q09327 533 aa19.14■□□□□ 0.66
SGCE-206ENST00000445866 EPM2AIP1Q7L775 607 aaPredicted RBP19.14■□□□□ 0.66
SGCE-206ENST00000445866 IFNLR1Q8IU57 520 aaPredicted RBP19.14■□□□□ 0.66
SGCE-206ENST00000445866 NELFCDQ8IXH7 590 aa19.14■□□□□ 0.66
SGCE-206ENST00000445866 SYCP3Q8IZU3 236 aa19.14■□□□□ 0.66
SGCE-206ENST00000445866 PRDM5Q9NQX1 630 aaPredicted RBP19.14■□□□□ 0.66
SGCE-206ENST00000445866 SCN10AQ9Y5Y9 1956 aa19.14■□□□□ 0.65
SGCE-206ENST00000445866 PITPNM1O00562 1244 aa19.14■□□□□ 0.65
SGCE-206ENST00000445866 EIF3DO15371 548 aaKnown RBP eCLIP19.14■□□□□ 0.65
SGCE-206ENST00000445866 FGFR4P22455 802 aa19.14■□□□□ 0.65
SGCE-206ENST00000445866 MBTD1Q05BQ5 628 aa19.14■□□□□ 0.65
SGCE-206ENST00000445866 RBL2Q08999 1139 aa19.14■□□□□ 0.65
SGCE-206ENST00000445866 KCNA1Q09470 495 aa19.14■□□□□ 0.65
SGCE-206ENST00000445866 STIM1Q13586 685 aa19.14■□□□□ 0.65
SGCE-206ENST00000445866 TAS1R3Q7RTX0 852 aa19.14■□□□□ 0.65
SGCE-206ENST00000445866 ADSSL1Q8N142 457 aa19.14■□□□□ 0.65
SGCE-206ENST00000445866 ANP32EQ9BTT0 268 aa19.14■□□□□ 0.65
SGCE-206ENST00000445866 HTATIP2Q9BUP3 242 aa19.14■□□□□ 0.65
SGCE-206ENST00000445866 PPP1R12CQ9BZL4 782 aa19.14■□□□□ 0.65
SGCE-206ENST00000445866 FZD8Q9H461 694 aa19.14■□□□□ 0.65
SGCE-206ENST00000445866 TBX21Q9UL17 535 aa19.14■□□□□ 0.65
SGCE-206ENST00000445866 PPP1R3GB7ZBB8 358 aa19.13■□□□□ 0.65
SGCE-206ENST00000445866 RPS6KA5O75582 802 aa19.13■□□□□ 0.65
SGCE-206ENST00000445866 PPP1R37O75864 691 aa19.13■□□□□ 0.65
SGCE-206ENST00000445866 PRKCBP05771 671 aa19.13■□□□□ 0.65
SGCE-206ENST00000445866 IQCF3P0C7M6 154 aa19.13■□□□□ 0.65
SGCE-206ENST00000445866 CYP2C18P33260 490 aa19.13■□□□□ 0.65
SGCE-206ENST00000445866 CCL23P55773 120 aa19.13■□□□□ 0.65
SGCE-206ENST00000445866 NCBP1Q09161 790 aaKnown RBP19.13■□□□□ 0.65
SGCE-206ENST00000445866 STX1AQ16623 288 aa19.13■□□□□ 0.65
SGCE-206ENST00000445866 KLHL10Q6JEL2 608 aa19.13■□□□□ 0.65
SGCE-206ENST00000445866 LRRC8DQ7L1W4 858 aa19.13■□□□□ 0.65
SGCE-206ENST00000445866 CATSPER4Q7RTX7 472 aa19.13■□□□□ 0.65
SGCE-206ENST00000445866 GUF1Q8N442 669 aaKnown RBP19.13■□□□□ 0.65
SGCE-206ENST00000445866 TMEM40Q8WWA1 233 aa19.13■□□□□ 0.65
SGCE-206ENST00000445866 TMEM206Q9H813 350 aa19.13■□□□□ 0.65
SGCE-206ENST00000445866 PRMT7Q9NVM4 692 aaPredicted RBP19.13■□□□□ 0.65
SGCE-206ENST00000445866 EXOC7Q9UPT5 735 aa19.13■□□□□ 0.65
SGCE-206ENST00000445866 USP20Q9Y2K6 914 aa19.13■□□□□ 0.65
SGCE-206ENST00000445866 NOC2LQ9Y3T9 749 aaKnown RBP19.13■□□□□ 0.65
SGCE-206ENST00000445866 PHLPP2Q6ZVD8 1323 aa19.12■□□□□ 0.65
SGCE-206ENST00000445866 TRIM43BA6NCK2 446 aa19.12■□□□□ 0.65
SGCE-206ENST00000445866 ACKR2O00590 384 aa19.12■□□□□ 0.65
SGCE-206ENST00000445866 GHRP10912 638 aa19.12■□□□□ 0.65
SGCE-206ENST00000445866 CD44P16070 742 aaKnown RBP19.12■□□□□ 0.65
SGCE-206ENST00000445866 HOXD13P35453 343 aa19.12■□□□□ 0.65
SGCE-206ENST00000445866 KNOP1Q1ED39 458 aaKnown RBP19.12■□□□□ 0.65
SGCE-206ENST00000445866 TMEM132AQ24JP5 1023 aa19.12■□□□□ 0.65
SGCE-206ENST00000445866 DPCR1Q3MIW9 517 aa19.12■□□□□ 0.65
SGCE-206ENST00000445866 FBXO47Q5MNV8 452 aa19.12■□□□□ 0.65
SGCE-206ENST00000445866 TRAF7Q6Q0C0 670 aa19.12■□□□□ 0.65
SGCE-206ENST00000445866 TRIM43Q96BQ3 446 aaPredicted RBP19.12■□□□□ 0.65
SGCE-206ENST00000445866 HVCN1Q96D96 273 aa19.12■□□□□ 0.65
SGCE-206ENST00000445866 BICD1Q96G01 975 aa19.12■□□□□ 0.65
SGCE-206ENST00000445866 CCDC113Q9H0I3 377 aa19.12■□□□□ 0.65
SGCE-206ENST00000445866 PPP1R2P41236 205 aa19.11■□□□□ 0.65
SGCE-206ENST00000445866 NFX1Q12986 1120 aaKnown RBP19.11■□□□□ 0.65
SGCE-206ENST00000445866 PRPF4BQ13523 1007 aaKnown RBP19.11■□□□□ 0.65
SGCE-206ENST00000445866 COBLL1Q53SF7 1204 aa19.11■□□□□ 0.65
SGCE-206ENST00000445866 DPF3Q92784 378 aa19.11■□□□□ 0.65
SGCE-206ENST00000445866 KCNN1Q92952 543 aa19.11■□□□□ 0.65
SGCE-206ENST00000445866 OSBPL7Q9BZF2 842 aa19.11■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms