RNA–Protein interactions for RNA: ENST00000444739.6

CASP4-203, Transcript of caspase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CASP4, Length 2,158 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-203ENST00000444739 TMOD4Q9NZQ9 345 aa10.81□□□□□ -0.68
CASP4-203ENST00000444739 GCNT4Q9P109 453 aa10.81□□□□□ -0.68
CASP4-203ENST00000444739 SYNGAP1Q96PV0 1343 aa10.81□□□□□ -0.68
CASP4-203ENST00000444739 GPR75-ASB3A0A0A6YYF3 556 aa10.8□□□□□ -0.68
CASP4-203ENST00000444739 AKAP3O75969 853 aa10.8□□□□□ -0.68
CASP4-203ENST00000444739 GH1P01241 217 aa10.8□□□□□ -0.68
CASP4-203ENST00000444739 TPBGLP0DKB5 382 aa10.8□□□□□ -0.68
CASP4-203ENST00000444739 HSPA6P17066 643 aa10.8□□□□□ -0.68
CASP4-203ENST00000444739 GM2AP17900 193 aa10.8□□□□□ -0.68
CASP4-203ENST00000444739 CYP11B2P19099 503 aa10.8□□□□□ -0.68
CASP4-203ENST00000444739 LMNB1P20700 586 aa10.8□□□□□ -0.68
CASP4-203ENST00000444739 ABCB4P21439 1286 aa10.8□□□□□ -0.68
CASP4-203ENST00000444739 SMARCA1P28370 1054 aa10.8□□□□□ -0.68
CASP4-203ENST00000444739 HOXD13P35453 343 aa10.8□□□□□ -0.68
CASP4-203ENST00000444739 TRAF1Q13077 416 aa10.8□□□□□ -0.68
CASP4-203ENST00000444739 LBRQ14739 615 aaKnown RBP10.8□□□□□ -0.68
CASP4-203ENST00000444739 SGSM1Q2NKQ1 1148 aa10.8□□□□□ -0.68
CASP4-203ENST00000444739 GNPTABQ3T906 1256 aa10.8□□□□□ -0.68
CASP4-203ENST00000444739 DCAF17Q5H9S7 520 aaPredicted RBP10.8□□□□□ -0.68
CASP4-203ENST00000444739 ANKRD42Q8N9B4 389 aa10.8□□□□□ -0.68
CASP4-203ENST00000444739 CNBD1Q8NA66 436 aa10.8□□□□□ -0.68
CASP4-203ENST00000444739 SLC17A8Q8NDX2 589 aa10.8□□□□□ -0.68
CASP4-203ENST00000444739 FBF1Q8TES7 1133 aa10.8□□□□□ -0.68
CASP4-203ENST00000444739 STK32AQ8WU08 396 aa10.8□□□□□ -0.68
CASP4-203ENST00000444739 CTNNBL1Q8WYA6 563 aaPredicted RBP10.8□□□□□ -0.68
CASP4-203ENST00000444739 SERPINB12Q96P63 405 aa10.8□□□□□ -0.68
CASP4-203ENST00000444739 TGS1Q96RS0 853 aaKnown RBP10.8□□□□□ -0.68
CASP4-203ENST00000444739 NT5C3AQ9H0P0 336 aa10.8□□□□□ -0.68
CASP4-203ENST00000444739 TXLNGQ9NUQ3 528 aa10.8□□□□□ -0.68
CASP4-203ENST00000444739 CYP39A1Q9NYL5 469 aa10.8□□□□□ -0.68
CASP4-203ENST00000444739 KLHL14Q9P2G3 628 aa10.8□□□□□ -0.68
CASP4-203ENST00000444739 COG5Q9UP83 839 aa10.8□□□□□ -0.68
CASP4-203ENST00000444739 ASB3Q9Y575 518 aa10.8□□□□□ -0.68
CASP4-203ENST00000444739 KDM3AQ9Y4C1 1321 aa10.8□□□□□ -0.68
CASP4-203ENST00000444739 LRRD1A4D1F6 860 aa10.8□□□□□ -0.68
CASP4-203ENST00000444739 SMIM24O75264 130 aa10.8□□□□□ -0.68
CASP4-203ENST00000444739 RASA1P20936 1047 aa10.8□□□□□ -0.68
CASP4-203ENST00000444739 STAT1P42224 750 aa10.8□□□□□ -0.68
CASP4-203ENST00000444739 ADCY7P51828 1080 aa10.8□□□□□ -0.68
CASP4-203ENST00000444739 RAD23BP54727 409 aa10.8□□□□□ -0.68
CASP4-203ENST00000444739 RRP1BQ14684 758 aaKnown RBP10.8□□□□□ -0.68
CASP4-203ENST00000444739 MTFR1Q15390 333 aa10.8□□□□□ -0.68
CASP4-203ENST00000444739 SLC5A9Q2M3M2 681 aa10.8□□□□□ -0.68
CASP4-203ENST00000444739 ARSHQ5FYA8 562 aa10.8□□□□□ -0.68
CASP4-203ENST00000444739 CCDC137Q6PK04 289 aaKnown RBP10.8□□□□□ -0.68
CASP4-203ENST00000444739 TRMT10CQ7L0Y3 403 aaKnown RBP10.8□□□□□ -0.68
CASP4-203ENST00000444739 LMNTD2Q8IXW0 634 aa10.8□□□□□ -0.68
CASP4-203ENST00000444739 ZNF444Q8N0Y2 327 aaPredicted RBP10.8□□□□□ -0.68
CASP4-203ENST00000444739 ENDOVQ8N8Q3 282 aaKnown RBP10.8□□□□□ -0.68
CASP4-203ENST00000444739 GDAP1Q8TB36 358 aa10.8□□□□□ -0.68
CASP4-203ENST00000444739 PIGOQ8TEQ8 1089 aa10.8□□□□□ -0.68
CASP4-203ENST00000444739 SLC35C1Q96A29 364 aa10.8□□□□□ -0.68
CASP4-203ENST00000444739 SYT15Q9BQS2 421 aa10.8□□□□□ -0.68
CASP4-203ENST00000444739 DDX23Q9BUQ8 820 aaKnown RBP10.8□□□□□ -0.68
CASP4-203ENST00000444739 USP40Q9NVE5 1235 aa10.8□□□□□ -0.68
CASP4-203ENST00000444739 MINPP1Q9UNW1 487 aa10.8□□□□□ -0.68
CASP4-203ENST00000444739 KIAA1024Q9UPX6 916 aa10.8□□□□□ -0.68
CASP4-203ENST00000444739 PITPNM2Q9BZ72 1349 aa10.8□□□□□ -0.68
CASP4-203ENST00000444739 SNED1Q8TER0 1413 aa10.79□□□□□ -0.68
CASP4-203ENST00000444739 GTPBP10A4D1E9 387 aaKnown RBP10.79□□□□□ -0.68
CASP4-203ENST00000444739 FOXO6A8MYZ6 492 aa10.79□□□□□ -0.68
CASP4-203ENST00000444739 IRF6O14896 467 aa10.79□□□□□ -0.68
CASP4-203ENST00000444739 HGSO14964 777 aaPredicted RBP10.79□□□□□ -0.68
CASP4-203ENST00000444739 RTN3O95197 1032 aaPredicted RBP10.79□□□□□ -0.68
CASP4-203ENST00000444739 DSG3P32926 999 aa10.79□□□□□ -0.68
CASP4-203ENST00000444739 SOX5P35711 763 aa10.79□□□□□ -0.68
CASP4-203ENST00000444739 GCLCP48506 637 aaPredicted RBP10.79□□□□□ -0.68
CASP4-203ENST00000444739 PEX5P50542 639 aa10.79□□□□□ -0.68
CASP4-203ENST00000444739 MXRA7P84157 204 aa10.79□□□□□ -0.68
CASP4-203ENST00000444739 LMNB2Q03252 620 aa10.79□□□□□ -0.68
CASP4-203ENST00000444739 KNOP1Q1ED39 458 aaKnown RBP10.79□□□□□ -0.68
CASP4-203ENST00000444739 GALNT15Q8N3T1 639 aa10.79□□□□□ -0.68
CASP4-203ENST00000444739 ASAP3Q8TDY4 903 aa10.79□□□□□ -0.68
CASP4-203ENST00000444739 MAGEB18Q96M61 343 aa10.79□□□□□ -0.68
CASP4-203ENST00000444739 CDC42EP4Q9H3Q1 356 aaKnown RBP10.79□□□□□ -0.68
CASP4-203ENST00000444739 AAASQ9NRG9 546 aa10.79□□□□□ -0.68
CASP4-203ENST00000444739 BSDC1Q9NW68 430 aaPredicted RBP10.79□□□□□ -0.68
CASP4-203ENST00000444739 DDX25Q9UHL0 483 aaKnown RBP10.79□□□□□ -0.68
CASP4-203ENST00000444739 POTEB3A0JP26 581 aa10.79□□□□□ -0.68
CASP4-203ENST00000444739 POTECB2RU33 542 aa10.79□□□□□ -0.68
CASP4-203ENST00000444739 hCG_1984214I3L0E3 225 aa10.79□□□□□ -0.68
CASP4-203ENST00000444739 CAMTA2O94983 1202 aa10.79□□□□□ -0.68
CASP4-203ENST00000444739 TTLL1O95922 423 aa10.79□□□□□ -0.68
CASP4-203ENST00000444739 PDHA1P08559 390 aa10.79□□□□□ -0.68
CASP4-203ENST00000444739 ACADSP16219 412 aa10.79□□□□□ -0.68
CASP4-203ENST00000444739 PCK1P35558 622 aa10.79□□□□□ -0.68
CASP4-203ENST00000444739 MARCKSL1P49006 195 aa10.79□□□□□ -0.68
CASP4-203ENST00000444739 CYP1B1Q16678 543 aa10.79□□□□□ -0.68
CASP4-203ENST00000444739 TCERG1LQ5VWI1 586 aa10.79□□□□□ -0.68
CASP4-203ENST00000444739 POTEBQ6S5H4 581 aa10.79□□□□□ -0.68
CASP4-203ENST00000444739 CYFIP1Q7L576 1253 aa10.79□□□□□ -0.68
CASP4-203ENST00000444739 EPM2AIP1Q7L775 607 aaPredicted RBP10.79□□□□□ -0.68
CASP4-203ENST00000444739 CCDC25Q86WR0 208 aa10.79□□□□□ -0.68
CASP4-203ENST00000444739 AGGF1Q8N302 714 aaeCLIP10.79□□□□□ -0.68
CASP4-203ENST00000444739 ZNF713Q8N859 430 aaPredicted RBP10.79□□□□□ -0.68
CASP4-203ENST00000444739 FAM13CQ8NE31 585 aa10.79□□□□□ -0.68
CASP4-203ENST00000444739 ZFAND2BQ8WV99 257 aa10.79□□□□□ -0.68
CASP4-203ENST00000444739 TEKT4Q8WW24 435 aa10.79□□□□□ -0.68
CASP4-203ENST00000444739 KRT35Q92764 455 aa10.79□□□□□ -0.68
CASP4-203ENST00000444739 COA7Q96BR5 231 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms