RNA–Protein interactions for RNA: ENST00000444440.1

SF3A1-203, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 5

Gene SF3A1, Length 777 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-203ENST00000444440 TMX3Q96JJ7 454 aa12.13□□□□□ -0.47
SF3A1-203ENST00000444440 MTRQ99707 1265 aa12.13□□□□□ -0.47
SF3A1-203ENST00000444440 AGPAT5Q9NUQ2 364 aa12.13□□□□□ -0.47
SF3A1-203ENST00000444440 FAM105AQ9NUU6 356 aa12.13□□□□□ -0.47
SF3A1-203ENST00000444440 NT5C1B-RDH14C9J2C7 533 aa12.12□□□□□ -0.47
SF3A1-203ENST00000444440 FSCN2O14926 492 aa12.12□□□□□ -0.47
SF3A1-203ENST00000444440 EOMESO95936 686 aa12.12□□□□□ -0.47
SF3A1-203ENST00000444440 OR52Z1P0C646 297 aa12.12□□□□□ -0.47
SF3A1-203ENST00000444440 LAG3P18627 525 aa12.12□□□□□ -0.47
SF3A1-203ENST00000444440 GLRA2P23416 452 aa12.12□□□□□ -0.47
SF3A1-203ENST00000444440 U2AF2P26368 475 aaKnown RBP eCLIP12.12□□□□□ -0.47
SF3A1-203ENST00000444440 ADAM15Q13444 863 aa12.12□□□□□ -0.47
SF3A1-203ENST00000444440 SAFBQ15424 915 aaKnown RBP eCLIP12.12□□□□□ -0.47
SF3A1-203ENST00000444440 POTEGQ6S5H5 508 aa12.12□□□□□ -0.47
SF3A1-203ENST00000444440 KCNT2Q6UVM3 1135 aa12.12□□□□□ -0.47
SF3A1-203ENST00000444440 AGMOQ6ZNB7 445 aa12.12□□□□□ -0.47
SF3A1-203ENST00000444440 FAM43BQ6ZT52 329 aaPredicted RBP12.12□□□□□ -0.47
SF3A1-203ENST00000444440 OTUD6AQ7L8S5 288 aa12.12□□□□□ -0.47
SF3A1-203ENST00000444440 RBM23Q86U06 439 aaKnown RBP12.12□□□□□ -0.47
SF3A1-203ENST00000444440 FAM178BQ8IXR5 827 aa12.12□□□□□ -0.47
SF3A1-203ENST00000444440 THNSL1Q8IYQ7 743 aa12.12□□□□□ -0.47
SF3A1-203ENST00000444440 LRRC43Q8N309 656 aa12.12□□□□□ -0.47
SF3A1-203ENST00000444440 FAM184AQ8NB25 1140 aa12.12□□□□□ -0.47
SF3A1-203ENST00000444440 VN1R2Q8NFZ6 395 aa12.12□□□□□ -0.47
SF3A1-203ENST00000444440 BCL7CQ8WUZ0 217 aaPredicted RBP12.12□□□□□ -0.47
SF3A1-203ENST00000444440 TBC1D32Q96NH3 1257 aa12.12□□□□□ -0.47
SF3A1-203ENST00000444440 JPH2Q9BR39 696 aaPredicted RBP12.12□□□□□ -0.47
SF3A1-203ENST00000444440 TRAIPQ9BWF2 469 aa12.12□□□□□ -0.47
SF3A1-203ENST00000444440 GPRC5CQ9NQ84 441 aa12.12□□□□□ -0.47
SF3A1-203ENST00000444440 CHST12Q9NRB3 414 aa12.12□□□□□ -0.47
SF3A1-203ENST00000444440 ANKEF1Q9NU02 776 aa12.12□□□□□ -0.47
SF3A1-203ENST00000444440 PPME1Q9Y570 386 aa12.12□□□□□ -0.47
SF3A1-203ENST00000444440 PCDHB6Q9Y5E3 794 aa12.12□□□□□ -0.47
SF3A1-203ENST00000444440 PCDHB12Q9Y5F1 795 aa12.12□□□□□ -0.47
SF3A1-203ENST00000444440 WDFY4Q6ZS81 3184 aa12.11□□□□□ -0.47
SF3A1-203ENST00000444440 MYO10Q9HD67 2058 aa12.11□□□□□ -0.47
SF3A1-203ENST00000444440 ANK1P16157 1881 aa12.11□□□□□ -0.47
SF3A1-203ENST00000444440 HIDE1A8MVS5 230 aa12.11□□□□□ -0.47
SF3A1-203ENST00000444440 PER2O15055 1255 aa12.11□□□□□ -0.47
SF3A1-203ENST00000444440 TSPAN1O60635 241 aa12.11□□□□□ -0.47
SF3A1-203ENST00000444440 USO1O60763 962 aaKnown RBP12.11□□□□□ -0.47
SF3A1-203ENST00000444440 ARL2P36404 184 aa12.11□□□□□ -0.47
SF3A1-203ENST00000444440 NRIP1P48552 1158 aa12.11□□□□□ -0.47
SF3A1-203ENST00000444440 PTENP60484 403 aa12.11□□□□□ -0.47
SF3A1-203ENST00000444440 CDC42EP1Q00587 391 aa12.11□□□□□ -0.47
SF3A1-203ENST00000444440 IL17AQ16552 155 aa12.11□□□□□ -0.47
SF3A1-203ENST00000444440 AMHR2Q16671 573 aa12.11□□□□□ -0.47
SF3A1-203ENST00000444440 PLPP4Q5VZY2 271 aa12.11□□□□□ -0.47
SF3A1-203ENST00000444440 MAEAQ7L5Y9 396 aa12.11□□□□□ -0.47
SF3A1-203ENST00000444440 SRGAP1Q7Z6B7 1085 aa12.11□□□□□ -0.47
SF3A1-203ENST00000444440 TCP11Q8WWU5 503 aa12.11□□□□□ -0.47
SF3A1-203ENST00000444440 CPB2Q96IY4 423 aa12.11□□□□□ -0.47
SF3A1-203ENST00000444440 MSLNLQ96KJ4 702 aa12.11□□□□□ -0.47
SF3A1-203ENST00000444440 EIF2AQ9BY44 585 aaKnown RBP12.11□□□□□ -0.47
SF3A1-203ENST00000444440 TLR9Q9NR96 1032 aa12.11□□□□□ -0.47
SF3A1-203ENST00000444440 DACT1Q9NYF0 836 aa12.11□□□□□ -0.47
SF3A1-203ENST00000444440 CLEC1BQ9P126 229 aa12.11□□□□□ -0.47
SF3A1-203ENST00000444440 DNAJB4Q9UDY4 337 aa12.11□□□□□ -0.47
SF3A1-203ENST00000444440 DOCK6Q96HP0 2047 aa12.11□□□□□ -0.47
SF3A1-203ENST00000444440 TTLL13PA6NNM8 815 aa12.1□□□□□ -0.47
SF3A1-203ENST00000444440 PP2D1A8MPX8 630 aa12.1□□□□□ -0.47
SF3A1-203ENST00000444440 B4GALT5O43286 388 aa12.1□□□□□ -0.47
SF3A1-203ENST00000444440 HOXA2O43364 376 aa12.1□□□□□ -0.47
SF3A1-203ENST00000444440 MBTPS2O43462 519 aa12.1□□□□□ -0.47
SF3A1-203ENST00000444440 GAS2O43903 313 aaKnown RBP12.1□□□□□ -0.47
SF3A1-203ENST00000444440 ZNF623O75123 536 aa12.1□□□□□ -0.47
SF3A1-203ENST00000444440 OFD1O75665 1012 aa12.1□□□□□ -0.47
SF3A1-203ENST00000444440 EDN1P05305 212 aa12.1□□□□□ -0.47
SF3A1-203ENST00000444440 BCAR1P56945 870 aa12.1□□□□□ -0.47
SF3A1-203ENST00000444440 PLCB3Q01970 1234 aa12.1□□□□□ -0.47
SF3A1-203ENST00000444440 MBTD1Q05BQ5 628 aa12.1□□□□□ -0.47
SF3A1-203ENST00000444440 CDR2LQ86X02 465 aaPredicted RBP12.1□□□□□ -0.47
SF3A1-203ENST00000444440 IFNLR1Q8IU57 520 aaPredicted RBP12.1□□□□□ -0.47
SF3A1-203ENST00000444440 ABI1Q8IZP0 508 aa12.1□□□□□ -0.47
SF3A1-203ENST00000444440 SLC39A11Q8N1S5 342 aa12.1□□□□□ -0.47
SF3A1-203ENST00000444440 SMG8Q8ND04 991 aaKnown RBP12.1□□□□□ -0.47
SF3A1-203ENST00000444440 BSNDQ8WZ55 320 aa12.1□□□□□ -0.47
SF3A1-203ENST00000444440 MRPS27Q92552 414 aaKnown RBP12.1□□□□□ -0.47
SF3A1-203ENST00000444440 ZNF558Q96NG5 402 aa12.1□□□□□ -0.47
SF3A1-203ENST00000444440 POLR3CQ9BUI4 534 aaPredicted RBP12.1□□□□□ -0.47
SF3A1-203ENST00000444440 INO80BQ9C086 356 aaPredicted RBP12.1□□□□□ -0.47
SF3A1-203ENST00000444440 POLR3FQ9H1D9 316 aaPredicted RBP12.1□□□□□ -0.47
SF3A1-203ENST00000444440 EPHX3Q9H6B9 360 aa12.1□□□□□ -0.47
SF3A1-203ENST00000444440 NRDE2Q9H7Z3 1164 aa12.1□□□□□ -0.47
SF3A1-203ENST00000444440 POLD4Q9HCU8 107 aa12.1□□□□□ -0.47
SF3A1-203ENST00000444440 TUFT1Q9NNX1 390 aa12.1□□□□□ -0.47
SF3A1-203ENST00000444440 AAASQ9NRG9 546 aa12.1□□□□□ -0.47
SF3A1-203ENST00000444440 TBC1D13Q9NVG8 400 aa12.1□□□□□ -0.47
SF3A1-203ENST00000444440 RNF216Q9NWF9 866 aaPredicted RBP12.1□□□□□ -0.47
SF3A1-203ENST00000444440 BARX2Q9UMQ3 279 aaPredicted RBP12.1□□□□□ -0.47
SF3A1-203ENST00000444440 INPP5FQ9Y2H2 1132 aa12.1□□□□□ -0.47
SF3A1-203ENST00000444440 PCDHB2Q9Y5E7 798 aa12.1□□□□□ -0.47
SF3A1-203ENST00000444440 ASAP2O43150 1006 aa12.09□□□□□ -0.47
SF3A1-203ENST00000444440 DGAT1O75907 488 aa12.09□□□□□ -0.47
SF3A1-203ENST00000444440 DDHD2O94830 711 aa12.09□□□□□ -0.47
SF3A1-203ENST00000444440 RPA1P27694 616 aa12.09□□□□□ -0.47
SF3A1-203ENST00000444440 GJB2P29033 226 aa12.09□□□□□ -0.47
SF3A1-203ENST00000444440 UBE3AQ05086 875 aa12.09□□□□□ -0.47
SF3A1-203ENST00000444440 PTGDRQ13258 359 aa12.09□□□□□ -0.47
SF3A1-203ENST00000444440 ORC2Q13416 577 aaPredicted RBP12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms