RNA–Protein interactions for RNA: ENST00000444191.5

HCFC1-203, Transcript of host cell factor C1, humanhuman

TSL 5

Gene HCFC1, Length 3,624 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1-203ENST00000444191 SLC16A4O15374 487 aa12.52□□□□□ -0.4
HCFC1-203ENST00000444191 MAPK4P31152 587 aa12.52□□□□□ -0.4
HCFC1-203ENST00000444191 GCKP35557 465 aa12.52□□□□□ -0.4
HCFC1-203ENST00000444191 CETN2P41208 172 aa12.52□□□□□ -0.4
HCFC1-203ENST00000444191 PPP4CP60510 307 aa12.52□□□□□ -0.4
HCFC1-203ENST00000444191 CBWD6Q4V339 395 aa12.52□□□□□ -0.4
HCFC1-203ENST00000444191 XKR9Q5GH70 373 aa12.52□□□□□ -0.4
HCFC1-203ENST00000444191 CBWD3Q5JTY5 395 aa12.52□□□□□ -0.4
HCFC1-203ENST00000444191 CBWD5Q5RIA9 395 aa12.52□□□□□ -0.4
HCFC1-203ENST00000444191 CHADLQ6NUI6 762 aa12.52□□□□□ -0.4
HCFC1-203ENST00000444191 PPP1R18Q6NYC8 613 aa12.52□□□□□ -0.4
HCFC1-203ENST00000444191 PWWP2AQ96N64 755 aa12.52□□□□□ -0.4
HCFC1-203ENST00000444191 KLHL14Q9P2G3 628 aa12.52□□□□□ -0.4
HCFC1-203ENST00000444191 ABCB11O95342 1321 aa12.52□□□□□ -0.4
HCFC1-203ENST00000444191 DNM1LO00429 736 aa12.52□□□□□ -0.4
HCFC1-203ENST00000444191 MSH4O15457 936 aa12.52□□□□□ -0.4
HCFC1-203ENST00000444191 BRAFP15056 766 aa12.52□□□□□ -0.4
HCFC1-203ENST00000444191 ITIH3Q06033 890 aa12.52□□□□□ -0.4
HCFC1-203ENST00000444191 SETDB1Q15047 1291 aa12.52□□□□□ -0.4
HCFC1-203ENST00000444191 TMEM119Q4V9L6 283 aa12.52□□□□□ -0.4
HCFC1-203ENST00000444191 GANQ9H2C0 597 aa12.52□□□□□ -0.4
HCFC1-203ENST00000444191 ALG13Q9NP73 1137 aaKnown RBP12.52□□□□□ -0.4
HCFC1-203ENST00000444191 SUN1O94901 812 aa12.52□□□□□ -0.41
HCFC1-203ENST00000444191 POLR2MP0CAP2 368 aa12.52□□□□□ -0.41
HCFC1-203ENST00000444191 DYNLT1P63172 113 aa12.52□□□□□ -0.41
HCFC1-203ENST00000444191 ATP11AP98196 1134 aa12.52□□□□□ -0.41
HCFC1-203ENST00000444191 EDRF1Q3B7T1 1238 aa12.52□□□□□ -0.41
HCFC1-203ENST00000444191 CDC42EP5Q6NZY7 148 aa12.52□□□□□ -0.41
HCFC1-203ENST00000444191 NT5DC3Q86UY8 548 aa12.52□□□□□ -0.41
HCFC1-203ENST00000444191 PI4K2AQ9BTU6 479 aa12.52□□□□□ -0.41
HCFC1-203ENST00000444191 DDX23Q9BUQ8 820 aaKnown RBP12.52□□□□□ -0.41
HCFC1-203ENST00000444191 KIFC3Q9BVG8 833 aa12.52□□□□□ -0.41
HCFC1-203ENST00000444191 TPX2Q9ULW0 747 aaKnown RBP12.52□□□□□ -0.41
HCFC1-203ENST00000444191 ZNF148Q9UQR1 794 aa12.52□□□□□ -0.41
HCFC1-203ENST00000444191 KIF1AQ12756 1690 aa12.52□□□□□ -0.41
HCFC1-203ENST00000444191 SPEF2Q9C093 1822 aa12.51□□□□□ -0.41
HCFC1-203ENST00000444191 PPEF1O14829 653 aaPredicted RBP12.51□□□□□ -0.41
HCFC1-203ENST00000444191 GAS8O95995 478 aa12.51□□□□□ -0.41
HCFC1-203ENST00000444191 ATF2P15336 505 aa12.51□□□□□ -0.41
HCFC1-203ENST00000444191 RINT1Q6NUQ1 792 aa12.51□□□□□ -0.41
HCFC1-203ENST00000444191 AMIGO3Q86WK7 504 aa12.51□□□□□ -0.41
HCFC1-203ENST00000444191 CPNE8Q86YQ8 564 aa12.51□□□□□ -0.41
HCFC1-203ENST00000444191 ZKSCAN4Q969J2 545 aaPredicted RBP12.51□□□□□ -0.41
HCFC1-203ENST00000444191 RNF25Q96BH1 459 aaPredicted RBP12.51□□□□□ -0.41
HCFC1-203ENST00000444191 SGSM3Q96HU1 749 aa12.51□□□□□ -0.41
HCFC1-203ENST00000444191 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.51□□□□□ -0.41
HCFC1-203ENST00000444191 CTNNAL1Q9UBT7 734 aa12.51□□□□□ -0.41
HCFC1-203ENST00000444191 USP20Q9Y2K6 914 aa12.51□□□□□ -0.41
HCFC1-203ENST00000444191 SPATA31A1Q5TZJ5 1347 aa12.51□□□□□ -0.41
HCFC1-203ENST00000444191 DIAPH2O60879 1101 aa12.51□□□□□ -0.41
HCFC1-203ENST00000444191 PIAS1O75925 651 aa12.51□□□□□ -0.41
HCFC1-203ENST00000444191 NDUFB10O96000 172 aa12.51□□□□□ -0.41
HCFC1-203ENST00000444191 ZNF394Q53GI3 561 aa12.51□□□□□ -0.41
HCFC1-203ENST00000444191 RNF207Q6ZRF8 634 aa12.51□□□□□ -0.41
HCFC1-203ENST00000444191 ZNF662Q6ZS27 426 aa12.51□□□□□ -0.41
HCFC1-203ENST00000444191 ZNF564Q8TBZ8 553 aaPredicted RBP12.51□□□□□ -0.41
HCFC1-203ENST00000444191 PIK3R5Q8WYR1 880 aa12.51□□□□□ -0.41
HCFC1-203ENST00000444191 POMGNT1Q8WZA1 660 aa12.51□□□□□ -0.41
HCFC1-203ENST00000444191 AGPAT1Q99943 283 aa12.51□□□□□ -0.41
HCFC1-203ENST00000444191 OSBPL7Q9BZF2 842 aa12.51□□□□□ -0.41
HCFC1-203ENST00000444191 GLT8D2Q9H1C3 349 aa12.51□□□□□ -0.41
HCFC1-203ENST00000444191 CNOT10Q9H9A5 744 aaKnown RBP12.51□□□□□ -0.41
HCFC1-203ENST00000444191 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.51□□□□□ -0.41
HCFC1-203ENST00000444191 ANAPC5Q9UJX4 755 aa12.51□□□□□ -0.41
HCFC1-203ENST00000444191 INTUQ9ULD6 942 aa12.51□□□□□ -0.41
HCFC1-203ENST00000444191 C4AP0C0L4 1744 aa12.51□□□□□ -0.41
HCFC1-203ENST00000444191 C4BP0C0L5 1744 aa12.51□□□□□ -0.41
HCFC1-203ENST00000444191 ESYT2A0FGR8 921 aa12.51□□□□□ -0.41
HCFC1-203ENST00000444191 PI4K2BG5E9Z4 385 aa12.51□□□□□ -0.41
HCFC1-203ENST00000444191 hCG_1984214I3L0E3 225 aa12.51□□□□□ -0.41
HCFC1-203ENST00000444191 TRAPPC3O43617 180 aa12.51□□□□□ -0.41
HCFC1-203ENST00000444191 POTEJP0CG39 1038 aa12.51□□□□□ -0.41
HCFC1-203ENST00000444191 ELF1P32519 619 aa12.51□□□□□ -0.41
HCFC1-203ENST00000444191 PDE6CP51160 858 aa12.51□□□□□ -0.41
HCFC1-203ENST00000444191 EIF3BP55884 814 aaKnown RBP12.51□□□□□ -0.41
HCFC1-203ENST00000444191 RHBDL3P58872 404 aa12.51□□□□□ -0.41
HCFC1-203ENST00000444191 GPC5P78333 572 aa12.51□□□□□ -0.41
HCFC1-203ENST00000444191 ASTE1Q2TB18 679 aaPredicted RBP12.51□□□□□ -0.41
HCFC1-203ENST00000444191 C6orf118Q5T5N4 469 aa12.51□□□□□ -0.41
HCFC1-203ENST00000444191 ZNF713Q8N859 430 aaPredicted RBP12.51□□□□□ -0.41
HCFC1-203ENST00000444191 ALG3Q92685 438 aa12.51□□□□□ -0.41
HCFC1-203ENST00000444191 PRCCQ92733 491 aaPredicted RBP12.51□□□□□ -0.41
HCFC1-203ENST00000444191 SYN2Q92777 582 aaPredicted RBP12.51□□□□□ -0.41
HCFC1-203ENST00000444191 FNBP1Q96RU3 617 aa12.51□□□□□ -0.41
HCFC1-203ENST00000444191 LXNQ9BS40 222 aa12.51□□□□□ -0.41
HCFC1-203ENST00000444191 ECT2Q9H8V3 914 aa12.51□□□□□ -0.41
HCFC1-203ENST00000444191 LRRC4CQ9HCJ2 640 aa12.51□□□□□ -0.41
HCFC1-203ENST00000444191 APEX2Q9UBZ4 518 aa12.51□□□□□ -0.41
HCFC1-203ENST00000444191 IGSF9BQ9UPX0 1349 aa12.51□□□□□ -0.41
HCFC1-203ENST00000444191 TMEM120BA0PK00 339 aa12.5□□□□□ -0.41
HCFC1-203ENST00000444191 CCT8L1PA6NM43 557 aa12.5□□□□□ -0.41
HCFC1-203ENST00000444191 HIP1RO75146 1068 aa12.5□□□□□ -0.41
HCFC1-203ENST00000444191 RPA1P27694 616 aa12.5□□□□□ -0.41
HCFC1-203ENST00000444191 SLC8A1P32418 973 aa12.5□□□□□ -0.41
HCFC1-203ENST00000444191 CRKP46108 304 aa12.5□□□□□ -0.41
HCFC1-203ENST00000444191 ANKRD20A8PQ5CZ79 823 aa12.5□□□□□ -0.41
HCFC1-203ENST00000444191 RFX8Q6ZV50 586 aa12.5□□□□□ -0.41
HCFC1-203ENST00000444191 PRUNE1Q86TP1 453 aa12.5□□□□□ -0.41
HCFC1-203ENST00000444191 FUKQ8N0W3 1084 aa12.5□□□□□ -0.41
HCFC1-203ENST00000444191 SLC17A8Q8NDX2 589 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms