RNA–Protein interactions for RNA: ENST00000444177.1

TREX1-202, Transcript of three prime repair exonuclease 1, humanhuman

TSL 1 (best) BASIC

Gene TREX1, Length 1,200 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1-202ENST00000444177 CD207Q9UJ71 328 aa15.62■□□□□ 0.09
TREX1-202ENST00000444177 PPME1Q9Y570 386 aa15.62■□□□□ 0.09
TREX1-202ENST00000444177 C19orf67A6NJJ6 358 aa15.61■□□□□ 0.09
TREX1-202ENST00000444177 ZBTB39O15060 712 aa15.61■□□□□ 0.09
TREX1-202ENST00000444177 GPR37L1O60883 481 aa15.61■□□□□ 0.09
TREX1-202ENST00000444177 NDUFV1P49821 464 aa15.61■□□□□ 0.09
TREX1-202ENST00000444177 TOB1P50616 345 aaPredicted RBP15.61■□□□□ 0.09
TREX1-202ENST00000444177 SMAD4Q13485 552 aaKnown RBP15.61■□□□□ 0.09
TREX1-202ENST00000444177 EMC2Q15006 297 aa15.61■□□□□ 0.09
TREX1-202ENST00000444177 SMAD2Q15796 467 aaKnown RBP15.61■□□□□ 0.09
TREX1-202ENST00000444177 CLLU1OSQ5K130 101 aa15.61■□□□□ 0.09
TREX1-202ENST00000444177 KCNT2Q6UVM3 1135 aa15.61■□□□□ 0.09
TREX1-202ENST00000444177 ZNF410Q86VK4 478 aa15.61■□□□□ 0.09
TREX1-202ENST00000444177 KSR1Q8IVT5 923 aa15.61■□□□□ 0.09
TREX1-202ENST00000444177 ADHFE1Q8IWW8 467 aa15.61■□□□□ 0.09
TREX1-202ENST00000444177 MSLNLQ96KJ4 702 aa15.61■□□□□ 0.09
TREX1-202ENST00000444177 HSD17B14Q9BPX1 270 aa15.61■□□□□ 0.09
TREX1-202ENST00000444177 INO80BQ9C086 356 aaPredicted RBP15.61■□□□□ 0.09
TREX1-202ENST00000444177 DHX33Q9H6R0 707 aaKnown RBP15.61■□□□□ 0.09
TREX1-202ENST00000444177 PUF60Q9UHX1 559 aaKnown RBP15.61■□□□□ 0.09
TREX1-202ENST00000444177 PCDHB6Q9Y5E3 794 aa15.61■□□□□ 0.09
TREX1-202ENST00000444177 FSCN2O14926 492 aa15.6■□□□□ 0.09
TREX1-202ENST00000444177 PER2O15055 1255 aa15.6■□□□□ 0.09
TREX1-202ENST00000444177 LYPLA2O95372 231 aa15.6■□□□□ 0.09
TREX1-202ENST00000444177 ATF7P17544 494 aaPredicted RBP15.6■□□□□ 0.09
TREX1-202ENST00000444177 SFPQP23246 707 aaKnown RBP eCLIP15.6■□□□□ 0.09
TREX1-202ENST00000444177 PLCB3Q01970 1234 aa15.6■□□□□ 0.09
TREX1-202ENST00000444177 CUL4AQ13619 759 aa15.6■□□□□ 0.09
TREX1-202ENST00000444177 LARP1BQ659C4 914 aaKnown RBP15.6■□□□□ 0.09
TREX1-202ENST00000444177 PDE12Q6L8Q7 609 aaKnown RBP15.6■□□□□ 0.09
TREX1-202ENST00000444177 EXOC8Q8IYI6 725 aa15.6■□□□□ 0.09
TREX1-202ENST00000444177 LRRC43Q8N309 656 aa15.6■□□□□ 0.09
TREX1-202ENST00000444177 ERMNQ8TAM6 284 aa15.6■□□□□ 0.09
TREX1-202ENST00000444177 HELQQ8TDG4 1101 aa15.6■□□□□ 0.09
TREX1-202ENST00000444177 MRPS27Q92552 414 aaKnown RBP15.6■□□□□ 0.09
TREX1-202ENST00000444177 SNX21Q969T3 373 aa15.6■□□□□ 0.09
TREX1-202ENST00000444177 TMEM143Q96AN5 459 aa15.6■□□□□ 0.09
TREX1-202ENST00000444177 MTRQ99707 1265 aa15.6■□□□□ 0.09
TREX1-202ENST00000444177 C11orf16Q9NQ32 467 aa15.6■□□□□ 0.09
TREX1-202ENST00000444177 LZTS1Q9Y250 596 aa15.6■□□□□ 0.09
TREX1-202ENST00000444177 C5orf42Q9H799 3197 aa15.59■□□□□ 0.09
TREX1-202ENST00000444177 GAS2O43903 313 aaKnown RBP15.59■□□□□ 0.09
TREX1-202ENST00000444177 MED24O75448 989 aa15.59■□□□□ 0.09
TREX1-202ENST00000444177 EYA4O95677 639 aa15.59■□□□□ 0.09
TREX1-202ENST00000444177 GLP2RO95838 553 aa15.59■□□□□ 0.09
TREX1-202ENST00000444177 ALADP13716 330 aa15.59■□□□□ 0.09
TREX1-202ENST00000444177 PBX3P40426 434 aa15.59■□□□□ 0.09
TREX1-202ENST00000444177 PHKA2P46019 1235 aa15.59■□□□□ 0.09
TREX1-202ENST00000444177 COASYQ13057 564 aa15.59■□□□□ 0.09
TREX1-202ENST00000444177 PTGDRQ13258 359 aa15.59■□□□□ 0.09
TREX1-202ENST00000444177 RILPL1Q5EBL4 403 aa15.59■□□□□ 0.09
TREX1-202ENST00000444177 HAUS3Q68CZ6 603 aa15.59■□□□□ 0.09
TREX1-202ENST00000444177 PIGOQ8TEQ8 1089 aa15.59■□□□□ 0.09
TREX1-202ENST00000444177 TCP11Q8WWU5 503 aa15.59■□□□□ 0.09
TREX1-202ENST00000444177 PRPF31Q8WWY3 499 aaKnown RBP15.59■□□□□ 0.09
TREX1-202ENST00000444177 PSPC1Q8WXF1 523 aaKnown RBP15.59■□□□□ 0.09
TREX1-202ENST00000444177 ZNF558Q96NG5 402 aa15.59■□□□□ 0.09
TREX1-202ENST00000444177 TRAIPQ9BWF2 469 aa15.59■□□□□ 0.09
TREX1-202ENST00000444177 IFT122Q9HBG6 1241 aa15.59■□□□□ 0.09
TREX1-202ENST00000444177 TUFT1Q9NNX1 390 aa15.59■□□□□ 0.09
TREX1-202ENST00000444177 SPG21Q9NZD8 308 aa15.59■□□□□ 0.09
TREX1-202ENST00000444177 COL4A3BPQ9Y5P4 624 aa15.59■□□□□ 0.09
TREX1-202ENST00000444177 PLXNA4Q9HCM2 1894 aa15.59■□□□□ 0.09
TREX1-202ENST00000444177 A0A087WWV3 80 aa15.58■□□□□ 0.08
TREX1-202ENST00000444177 VPS37CA5D8V6 355 aaPredicted RBP15.58■□□□□ 0.08
TREX1-202ENST00000444177 FAM86C2PA6NEL3 165 aa15.58■□□□□ 0.08
TREX1-202ENST00000444177 USO1O60763 962 aaKnown RBP15.58■□□□□ 0.08
TREX1-202ENST00000444177 SPATA31C1P0DKV0 1188 aa15.58■□□□□ 0.08
TREX1-202ENST00000444177 SKIP12755 728 aa15.58■□□□□ 0.08
TREX1-202ENST00000444177 PPM1AP35813 382 aa15.58■□□□□ 0.08
TREX1-202ENST00000444177 RARRES1P49788 294 aa15.58■□□□□ 0.08
TREX1-202ENST00000444177 FXR2P51116 673 aaKnown RBP eCLIP15.58■□□□□ 0.08
TREX1-202ENST00000444177 KRT17Q04695 432 aa15.58■□□□□ 0.08
TREX1-202ENST00000444177 DUSP6Q16828 381 aa15.58■□□□□ 0.08
TREX1-202ENST00000444177 TWF2Q6IBS0 349 aaKnown RBP15.58■□□□□ 0.08
TREX1-202ENST00000444177 POTEGQ6S5H5 508 aa15.58■□□□□ 0.08
TREX1-202ENST00000444177 CATSPER4Q7RTX7 472 aa15.58■□□□□ 0.08
TREX1-202ENST00000444177 CATSPER3Q86XQ3 398 aa15.58■□□□□ 0.08
TREX1-202ENST00000444177 C4orf32Q8N8J7 132 aa15.58■□□□□ 0.08
TREX1-202ENST00000444177 CDCA3Q99618 268 aaPredicted RBP15.58■□□□□ 0.08
TREX1-202ENST00000444177 RAB34Q9BZG1 259 aa15.58■□□□□ 0.08
TREX1-202ENST00000444177 EIF4ENIF1Q9NRA8 985 aaKnown RBP15.58■□□□□ 0.08
TREX1-202ENST00000444177 ANKEF1Q9NU02 776 aa15.58■□□□□ 0.08
TREX1-202ENST00000444177 BARX2Q9UMQ3 279 aaPredicted RBP15.58■□□□□ 0.08
TREX1-202ENST00000444177 PIN4Q9Y237 131 aaKnown RBP15.58■□□□□ 0.08
TREX1-202ENST00000444177 K7ELQ4 463 aaPredicted RBP15.57■□□□□ 0.08
TREX1-202ENST00000444177 LAD1O00515 517 aa15.57■□□□□ 0.08
TREX1-202ENST00000444177 ZNF623O75123 536 aa15.57■□□□□ 0.08
TREX1-202ENST00000444177 DGAT1O75907 488 aa15.57■□□□□ 0.08
TREX1-202ENST00000444177 SRGAP2CP0DJJ0 459 aa15.57■□□□□ 0.08
TREX1-202ENST00000444177 RBM10P98175 930 aaKnown RBP15.57■□□□□ 0.08
TREX1-202ENST00000444177 LAMTOR4Q0VGL1 99 aa15.57■□□□□ 0.08
TREX1-202ENST00000444177 LONRF3Q496Y0 759 aa15.57■□□□□ 0.08
TREX1-202ENST00000444177 PLPP4Q5VZY2 271 aa15.57■□□□□ 0.08
TREX1-202ENST00000444177 SMRP1Q8NCR6 262 aa15.57■□□□□ 0.08
TREX1-202ENST00000444177 VN1R2Q8NFZ6 395 aa15.57■□□□□ 0.08
TREX1-202ENST00000444177 LPPQ93052 612 aa15.57■□□□□ 0.08
TREX1-202ENST00000444177 POP1Q99575 1024 aaKnown RBP15.57■□□□□ 0.08
TREX1-202ENST00000444177 TCF25Q9BQ70 676 aa15.57■□□□□ 0.08
TREX1-202ENST00000444177 POLR3CQ9BUI4 534 aaPredicted RBP15.57■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms