RNA–Protein interactions for RNA: ENST00000443537.2

R3HDM1-210, Transcript of R3H domain containing 1, humanhuman

TSL 3

Gene R3HDM1, Length 710 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-210ENST00000443537 UBE2Q2LH0YL09 131 aa8.09□□□□□ -1.11
R3HDM1-210ENST00000443537 TRAF5O00463 557 aa8.09□□□□□ -1.11
R3HDM1-210ENST00000443537 LAD1O00515 517 aa8.09□□□□□ -1.11
R3HDM1-210ENST00000443537 GAS2O43903 313 aaKnown RBP8.09□□□□□ -1.11
R3HDM1-210ENST00000443537 YEATS4O95619 227 aa8.09□□□□□ -1.11
R3HDM1-210ENST00000443537 ADH5P11766 374 aa8.09□□□□□ -1.11
R3HDM1-210ENST00000443537 SLC16A2P36021 539 aa8.09□□□□□ -1.11
R3HDM1-210ENST00000443537 GJA8P48165 433 aa8.09□□□□□ -1.11
R3HDM1-210ENST00000443537 GCLCP48506 637 aaPredicted RBP8.09□□□□□ -1.11
R3HDM1-210ENST00000443537 HUNKP57058 714 aa8.09□□□□□ -1.11
R3HDM1-210ENST00000443537 GHRHRQ02643 423 aa8.09□□□□□ -1.11
R3HDM1-210ENST00000443537 SOX4Q06945 474 aaPredicted RBP8.09□□□□□ -1.11
R3HDM1-210ENST00000443537 SREBF2Q12772 1141 aa8.09□□□□□ -1.11
R3HDM1-210ENST00000443537 RESTQ13127 1097 aa8.09□□□□□ -1.11
R3HDM1-210ENST00000443537 ZYXQ15942 572 aaKnown RBP8.09□□□□□ -1.11
R3HDM1-210ENST00000443537 OTUD7BQ6GQQ9 843 aa8.09□□□□□ -1.11
R3HDM1-210ENST00000443537 ANKRD23Q86SG2 305 aa8.09□□□□□ -1.11
R3HDM1-210ENST00000443537 SAPCD2Q86UD0 394 aa8.09□□□□□ -1.11
R3HDM1-210ENST00000443537 TEX13BQ9BXU2 312 aa8.09□□□□□ -1.11
R3HDM1-210ENST00000443537 UBA5Q9GZZ9 404 aa8.09□□□□□ -1.11
R3HDM1-210ENST00000443537 PSTPIP2Q9H939 334 aa8.09□□□□□ -1.11
R3HDM1-210ENST00000443537 VPS54Q9P1Q0 977 aa8.09□□□□□ -1.11
R3HDM1-210ENST00000443537 FBXO40Q9UH90 709 aa8.09□□□□□ -1.11
R3HDM1-210ENST00000443537 EFR3BQ9Y2G0 817 aa8.09□□□□□ -1.11
R3HDM1-210ENST00000443537 ZDHHC9Q9Y397 364 aa8.09□□□□□ -1.11
R3HDM1-210ENST00000443537 LOXHD1Q8IVV2 1947 aa8.08□□□□□ -1.12
R3HDM1-210ENST00000443537 ZNFX1Q9P2E3 1918 aaKnown RBP8.08□□□□□ -1.12
R3HDM1-210ENST00000443537 LOC102724159A0A0B4J2E5 919 aa8.08□□□□□ -1.12
R3HDM1-210ENST00000443537 SMCO2A6NFE2 343 aa8.08□□□□□ -1.12
R3HDM1-210ENST00000443537 VWA5AO00534 786 aa8.08□□□□□ -1.12
R3HDM1-210ENST00000443537 SLC25A27O95847 323 aa8.08□□□□□ -1.12
R3HDM1-210ENST00000443537 GCFC2P16383 781 aaKnown RBP8.08□□□□□ -1.12
R3HDM1-210ENST00000443537 YY1P25490 414 aa8.08□□□□□ -1.12
R3HDM1-210ENST00000443537 NOS3P29474 1203 aa8.08□□□□□ -1.12
R3HDM1-210ENST00000443537 CCNA1P78396 465 aa8.08□□□□□ -1.12
R3HDM1-210ENST00000443537 ARID5AQ03989 594 aa8.08□□□□□ -1.12
R3HDM1-210ENST00000443537 PKP1Q13835 747 aa8.08□□□□□ -1.12
R3HDM1-210ENST00000443537 MBTPS1Q14703 1052 aa8.08□□□□□ -1.12
R3HDM1-210ENST00000443537 PWP2Q15269 919 aaKnown RBP8.08□□□□□ -1.12
R3HDM1-210ENST00000443537 SLC35G1Q2M3R5 365 aa8.08□□□□□ -1.12
R3HDM1-210ENST00000443537 ZC3H12AQ5D1E8 599 aaKnown RBP8.08□□□□□ -1.12
R3HDM1-210ENST00000443537 KIAA1755Q5JYT7 1200 aa8.08□□□□□ -1.12
R3HDM1-210ENST00000443537 CST9Q5W186 159 aa8.08□□□□□ -1.12
R3HDM1-210ENST00000443537 RGMBQ6NW40 437 aa8.08□□□□□ -1.12
R3HDM1-210ENST00000443537 REC114Q7Z4M0 266 aa8.08□□□□□ -1.12
R3HDM1-210ENST00000443537 CHST13Q8NET6 341 aa8.08□□□□□ -1.12
R3HDM1-210ENST00000443537 KCNG4Q8TDN1 519 aa8.08□□□□□ -1.12
R3HDM1-210ENST00000443537 CLMNQ96JQ2 1002 aa8.08□□□□□ -1.12
R3HDM1-210ENST00000443537 PARK7Q99497 189 aaKnown RBP8.08□□□□□ -1.12
R3HDM1-210ENST00000443537 NUP88Q99567 741 aaPredicted RBP8.08□□□□□ -1.12
R3HDM1-210ENST00000443537 ATXN3LQ9H3M9 355 aa8.08□□□□□ -1.12
R3HDM1-210ENST00000443537 PIDD1Q9HB75 910 aa8.08□□□□□ -1.12
R3HDM1-210ENST00000443537 VAT1LQ9HCJ6 419 aa8.08□□□□□ -1.12
R3HDM1-210ENST00000443537 CCPG1Q9ULG6 757 aa8.08□□□□□ -1.12
R3HDM1-210ENST00000443537 ZNF236Q9UL36 1845 aa8.08□□□□□ -1.12
R3HDM1-210ENST00000443537 PFASO15067 1338 aa8.07□□□□□ -1.12
R3HDM1-210ENST00000443537 SYNGAP1Q96PV0 1343 aa8.07□□□□□ -1.12
R3HDM1-210ENST00000443537 BTBD18B2RXH4 712 aa8.07□□□□□ -1.12
R3HDM1-210ENST00000443537 TMPRSS2O15393 492 aa8.07□□□□□ -1.12
R3HDM1-210ENST00000443537 BAG4O95429 457 aaKnown RBP8.07□□□□□ -1.12
R3HDM1-210ENST00000443537 NCLP19338 710 aaKnown RBP8.07□□□□□ -1.12
R3HDM1-210ENST00000443537 NASPP49321 788 aaPredicted RBP8.07□□□□□ -1.12
R3HDM1-210ENST00000443537 USP11P51784 963 aa8.07□□□□□ -1.12
R3HDM1-210ENST00000443537 ETF1P62495 437 aaKnown RBP8.07□□□□□ -1.12
R3HDM1-210ENST00000443537 ADGRE1Q14246 886 aa8.07□□□□□ -1.12
R3HDM1-210ENST00000443537 NONOQ15233 471 aaKnown RBP eCLIP8.07□□□□□ -1.12
R3HDM1-210ENST00000443537 NPY5RQ15761 445 aa8.07□□□□□ -1.12
R3HDM1-210ENST00000443537 SKOR2Q2VWA4 1001 aaPredicted RBP8.07□□□□□ -1.12
R3HDM1-210ENST00000443537 PPM1JQ5JR12 505 aa8.07□□□□□ -1.12
R3HDM1-210ENST00000443537 MOXD1Q6UVY6 613 aa8.07□□□□□ -1.12
R3HDM1-210ENST00000443537 GADL1Q6ZQY3 521 aa8.07□□□□□ -1.12
R3HDM1-210ENST00000443537 RASGRP2Q7LDG7 609 aa8.07□□□□□ -1.12
R3HDM1-210ENST00000443537 SLC43A3Q8NBI5 491 aa8.07□□□□□ -1.12
R3HDM1-210ENST00000443537 SHCBP1Q8NEM2 672 aa8.07□□□□□ -1.12
R3HDM1-210ENST00000443537 AIFM3Q96NN9 605 aa8.07□□□□□ -1.12
R3HDM1-210ENST00000443537 MPHOSPH6Q99547 160 aaKnown RBP8.07□□□□□ -1.12
R3HDM1-210ENST00000443537 ANP32EQ9BTT0 268 aa8.07□□□□□ -1.12
R3HDM1-210ENST00000443537 LRRC3Q9BY71 257 aa8.07□□□□□ -1.12
R3HDM1-210ENST00000443537 SSU72Q9NP77 194 aaKnown RBP8.07□□□□□ -1.12
R3HDM1-210ENST00000443537 RTEL1Q9NZ71 1219 aa8.07□□□□□ -1.12
R3HDM1-210ENST00000443537 CRIM1Q9NZV1 1036 aa8.07□□□□□ -1.12
R3HDM1-210ENST00000443537 FRMD4AQ9P2Q2 1039 aaPredicted RBP8.07□□□□□ -1.12
R3HDM1-210ENST00000443537 HIF3AQ9Y2N7 669 aa8.07□□□□□ -1.12
R3HDM1-210ENST00000443537 CCL15-CCL14A0A0B4J2E2 113 aa8.06□□□□□ -1.12
R3HDM1-210ENST00000443537 KRBA1A5PL33 1030 aa8.06□□□□□ -1.12
R3HDM1-210ENST00000443537 B4DLN1 442 aa8.06□□□□□ -1.12
R3HDM1-210ENST00000443537 GCOM1H8Y6P7 765 aaPredicted RBP8.06□□□□□ -1.12
R3HDM1-210ENST00000443537 RNGTTO60942 597 aaKnown RBP8.06□□□□□ -1.12
R3HDM1-210ENST00000443537 PPP6R2O75170 966 aa8.06□□□□□ -1.12
R3HDM1-210ENST00000443537 MBD3O95983 291 aa8.06□□□□□ -1.12
R3HDM1-210ENST00000443537 POLR2MP0CAP2 368 aa8.06□□□□□ -1.12
R3HDM1-210ENST00000443537 ASPAP45381 313 aa8.06□□□□□ -1.12
R3HDM1-210ENST00000443537 ZNF165P49910 485 aa8.06□□□□□ -1.12
R3HDM1-210ENST00000443537 HSD17B4P51659 736 aa8.06□□□□□ -1.12
R3HDM1-210ENST00000443537 HERVK_113P62684 666 aa8.06□□□□□ -1.12
R3HDM1-210ENST00000443537 ERVK-24P63145 666 aa8.06□□□□□ -1.12
R3HDM1-210ENST00000443537 GUCY1B3Q02153 619 aa8.06□□□□□ -1.12
R3HDM1-210ENST00000443537 NOGQ13253 232 aa8.06□□□□□ -1.12
R3HDM1-210ENST00000443537 CCL15Q16663 113 aa8.06□□□□□ -1.12
R3HDM1-210ENST00000443537 FBXW10Q5XX13 1052 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms