RNA–Protein interactions for RNA: ENST00000442234.5

LIG4-203, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIG4, Length 3,982 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-203ENST00000442234 NLRP9Q7RTR0 991 aa2.99□□□□□ -1.93
LIG4-203ENST00000442234 VPS36Q86VN1 386 aa2.99□□□□□ -1.93
LIG4-203ENST00000442234 SLC15A3Q8IY34 581 aa2.99□□□□□ -1.93
LIG4-203ENST00000442234 CHCHD4Q8N4Q1 142 aa2.99□□□□□ -1.93
LIG4-203ENST00000442234 TTC39CQ8N584 583 aa2.99□□□□□ -1.93
LIG4-203ENST00000442234 SYT2Q8N9I0 419 aaPredicted RBP2.99□□□□□ -1.93
LIG4-203ENST00000442234 SCAIQ8N9R8 606 aa2.99□□□□□ -1.93
LIG4-203ENST00000442234 C1orf131Q8NDD1 294 aaKnown RBP2.99□□□□□ -1.93
LIG4-203ENST00000442234 DDHD1Q8NEL9 900 aa2.99□□□□□ -1.93
LIG4-203ENST00000442234 SUPT20HQ8NEM7 779 aa2.99□□□□□ -1.93
LIG4-203ENST00000442234 OTUD7AQ8TE49 926 aaPredicted RBP2.99□□□□□ -1.93
LIG4-203ENST00000442234 STMN2Q93045 179 aa2.99□□□□□ -1.93
LIG4-203ENST00000442234 CCDC127Q96BQ5 260 aa2.99□□□□□ -1.93
LIG4-203ENST00000442234 NMD3Q96D46 503 aaKnown RBP2.99□□□□□ -1.93
LIG4-203ENST00000442234 MAML3Q96JK9 1138 aa2.99□□□□□ -1.93
LIG4-203ENST00000442234 SNX27Q96L92 541 aa2.99□□□□□ -1.93
LIG4-203ENST00000442234 NEK1Q96PY6 1258 aa2.99□□□□□ -1.93
LIG4-203ENST00000442234 NUDCD1Q96RS6 583 aa2.99□□□□□ -1.93
LIG4-203ENST00000442234 TTC1Q99614 292 aa2.99□□□□□ -1.93
LIG4-203ENST00000442234 ECT2Q9H8V3 914 aa2.99□□□□□ -1.93
LIG4-203ENST00000442234 AS3MTQ9HBK9 375 aa2.99□□□□□ -1.93
LIG4-203ENST00000442234 STOML1Q9UBI4 398 aa2.99□□□□□ -1.93
LIG4-203ENST00000442234 ZMAT5Q9UDW3 170 aaKnown RBP2.99□□□□□ -1.93
LIG4-203ENST00000442234 COMMD3-BMI1R4GMX3 469 aa2.99□□□□□ -1.93
LIG4-203ENST00000442234 KIF1AQ12756 1690 aa2.99□□□□□ -1.93
LIG4-203ENST00000442234 NAV3Q8IVL0 2385 aa2.99□□□□□ -1.93
LIG4-203ENST00000442234 SPAG17Q6Q759 2223 aa2.98□□□□□ -1.93
LIG4-203ENST00000442234 XRN1Q8IZH2 1706 aaKnown RBP2.98□□□□□ -1.93
LIG4-203ENST00000442234 UNC80Q8N2C7 3258 aa2.98□□□□□ -1.93
LIG4-203ENST00000442234 KDRP35968 1356 aa2.98□□□□□ -1.93
LIG4-203ENST00000442234 PI4KAP2A4QPH2 592 aa2.98□□□□□ -1.93
LIG4-203ENST00000442234 NVLO15381 856 aaKnown RBP2.98□□□□□ -1.93
LIG4-203ENST00000442234 ATP1A3P13637 1013 aa2.98□□□□□ -1.93
LIG4-203ENST00000442234 KRT4P19013 534 aa2.98□□□□□ -1.93
LIG4-203ENST00000442234 ATP6V1C1P21283 382 aa2.98□□□□□ -1.93
LIG4-203ENST00000442234 HMGB2P26583 209 aaKnown RBP2.98□□□□□ -1.93
LIG4-203ENST00000442234 TKTP29401 623 aaKnown RBP2.98□□□□□ -1.93
LIG4-203ENST00000442234 SARSP49591 514 aaKnown RBP2.98□□□□□ -1.93
LIG4-203ENST00000442234 ATP8B2P98198 1209 aa2.98□□□□□ -1.93
LIG4-203ENST00000442234 DHX9Q08211 1270 aaKnown RBP2.98□□□□□ -1.93
LIG4-203ENST00000442234 SREBF2Q12772 1141 aa2.98□□□□□ -1.93
LIG4-203ENST00000442234 CLPPQ16740 277 aaPredicted RBP2.98□□□□□ -1.93
LIG4-203ENST00000442234 COBLL1Q53SF7 1204 aa2.98□□□□□ -1.93
LIG4-203ENST00000442234 EMBQ6PCB8 327 aa2.98□□□□□ -1.93
LIG4-203ENST00000442234 INTS8Q75QN2 995 aaKnown RBP2.98□□□□□ -1.93
LIG4-203ENST00000442234 OTOP1Q7RTM1 612 aa2.98□□□□□ -1.93
LIG4-203ENST00000442234 DPP9Q86TI2 863 aa2.98□□□□□ -1.93
LIG4-203ENST00000442234 VSIG1Q86XK7 387 aa2.98□□□□□ -1.93
LIG4-203ENST00000442234 PI4KAP1Q8N8J0 262 aa2.98□□□□□ -1.93
LIG4-203ENST00000442234 TNIP2Q8NFZ5 429 aa2.98□□□□□ -1.93
LIG4-203ENST00000442234 GDAP1Q8TB36 358 aa2.98□□□□□ -1.93
LIG4-203ENST00000442234 DIS3LQ8TF46 1054 aaKnown RBP2.98□□□□□ -1.93
LIG4-203ENST00000442234 ARHGEF2Q92974 986 aaKnown RBP2.98□□□□□ -1.93
LIG4-203ENST00000442234 KIFC2Q96AC6 838 aa2.98□□□□□ -1.93
LIG4-203ENST00000442234 THAP11Q96EK4 314 aa2.98□□□□□ -1.93
LIG4-203ENST00000442234 TESK2Q96S53 571 aa2.98□□□□□ -1.93
LIG4-203ENST00000442234 SMC6Q96SB8 1091 aa2.98□□□□□ -1.93
LIG4-203ENST00000442234 COQ7Q99807 217 aa2.98□□□□□ -1.93
LIG4-203ENST00000442234 HTATIP2Q9BUP3 242 aa2.98□□□□□ -1.93
LIG4-203ENST00000442234 C2orf49Q9BVC5 232 aaPredicted RBP2.98□□□□□ -1.93
LIG4-203ENST00000442234 ETNK2Q9NVF9 386 aa2.98□□□□□ -1.93
LIG4-203ENST00000442234 PAG1Q9NWQ8 432 aa2.98□□□□□ -1.93
LIG4-203ENST00000442234 HACD3Q9P035 362 aa2.98□□□□□ -1.93
LIG4-203ENST00000442234 LEMD3Q9Y2U8 911 aa2.98□□□□□ -1.93
LIG4-203ENST00000442234 SUGT1Q9Y2Z0 365 aa2.98□□□□□ -1.93
LIG4-203ENST00000442234 KNTC1P50748 2209 aa2.98□□□□□ -1.93
LIG4-203ENST00000442234 ATP7BP35670 1465 aa2.98□□□□□ -1.93
LIG4-203ENST00000442234 RTL1A6NKG5 1358 aa2.98□□□□□ -1.93
LIG4-203ENST00000442234 USP17L3A6NCW0 530 aa2.98□□□□□ -1.93
LIG4-203ENST00000442234 USP17L4A6NCW7 530 aa2.98□□□□□ -1.93
LIG4-203ENST00000442234 SOWAHDA6NJG2 315 aa2.98□□□□□ -1.93
LIG4-203ENST00000442234 PHF20L1A8MW92 1017 aa2.98□□□□□ -1.93
LIG4-203ENST00000442234 ATP9BO43861 1147 aa2.98□□□□□ -1.93
LIG4-203ENST00000442234 DNAJC6O75061 913 aa2.98□□□□□ -1.93
LIG4-203ENST00000442234 GDF11O95390 407 aa2.98□□□□□ -1.93
LIG4-203ENST00000442234 LMNAP02545 664 aaKnown RBP2.98□□□□□ -1.93
LIG4-203ENST00000442234 GSTA1P08263 222 aa2.98□□□□□ -1.93
LIG4-203ENST00000442234 PDGFRBP09619 1106 aa2.98□□□□□ -1.93
LIG4-203ENST00000442234 ACRP10323 421 aa2.98□□□□□ -1.93
LIG4-203ENST00000442234 IDO1P14902 403 aa2.98□□□□□ -1.93
LIG4-203ENST00000442234 CPA1P15085 419 aa2.98□□□□□ -1.93
LIG4-203ENST00000442234 HOXA10P31260 410 aaPredicted RBP2.98□□□□□ -1.93
LIG4-203ENST00000442234 SLC16A2P36021 539 aa2.98□□□□□ -1.93
LIG4-203ENST00000442234 TCF7P36402 384 aaPredicted RBP2.98□□□□□ -1.93
LIG4-203ENST00000442234 MSH2P43246 934 aa2.98□□□□□ -1.93
LIG4-203ENST00000442234 TUBP50607 506 aa2.98□□□□□ -1.93
LIG4-203ENST00000442234 MRPS25P82663 173 aaKnown RBP2.98□□□□□ -1.93
LIG4-203ENST00000442234 DCTN2Q13561 401 aaKnown RBP2.98□□□□□ -1.93
LIG4-203ENST00000442234 TUBA3CQ13748 450 aa2.98□□□□□ -1.93
LIG4-203ENST00000442234 SGSM1Q2NKQ1 1148 aa2.98□□□□□ -1.93
LIG4-203ENST00000442234 GLE1Q53GS7 698 aaKnown RBP2.98□□□□□ -1.93
LIG4-203ENST00000442234 GJC2Q5T442 439 aaPredicted RBP2.98□□□□□ -1.93
LIG4-203ENST00000442234 TSHZ3Q63HK5 1081 aa2.98□□□□□ -1.93
LIG4-203ENST00000442234 DESI1Q6ICB0 168 aa2.98□□□□□ -1.93
LIG4-203ENST00000442234 CCNI2Q6ZMN8 369 aaPredicted RBP2.98□□□□□ -1.93
LIG4-203ENST00000442234 HS2ST1Q7LGA3 356 aa2.98□□□□□ -1.93
LIG4-203ENST00000442234 USP17L1Q7RTZ2 530 aa2.98□□□□□ -1.93
LIG4-203ENST00000442234 DEFB128Q7Z7B8 93 aa2.98□□□□□ -1.93
LIG4-203ENST00000442234 CATIPQ7Z7H3 387 aa2.98□□□□□ -1.93
LIG4-203ENST00000442234 PATL1Q86TB9 770 aaKnown RBP2.98□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms