RNA–Protein interactions for RNA: ENST00000441998.5

NELFE-205, Transcript of negative elongation factor complex member E, humanhuman

APPRIS ALT2 TSL 5

Gene NELFE, Length 1,075 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-205ENST00000441998 TMEM143Q96AN5 459 aa12.42□□□□□ -0.42
NELFE-205ENST00000441998 NLRP4Q96MN2 994 aa12.42□□□□□ -0.42
NELFE-205ENST00000441998 SH2D3AQ9BRG2 576 aa12.42□□□□□ -0.42
NELFE-205ENST00000441998 FAM105AQ9NUU6 356 aa12.42□□□□□ -0.42
NELFE-205ENST00000441998 CLDND1Q9NY35 253 aa12.42□□□□□ -0.42
NELFE-205ENST00000441998 SPG21Q9NZD8 308 aa12.42□□□□□ -0.42
NELFE-205ENST00000441998 NOL7Q9UMY1 257 aaKnown RBP12.42□□□□□ -0.42
NELFE-205ENST00000441998 PIN4Q9Y237 131 aaKnown RBP12.42□□□□□ -0.42
NELFE-205ENST00000441998 CNTNAP2Q9UHC6 1331 aa12.41□□□□□ -0.42
NELFE-205ENST00000441998 RBAK-RBAKDNI3L0D1 243 aa12.41□□□□□ -0.42
NELFE-205ENST00000441998 OR52Z1P0C646 297 aa12.41□□□□□ -0.42
NELFE-205ENST00000441998 SRGAP2CP0DJJ0 459 aa12.41□□□□□ -0.42
NELFE-205ENST00000441998 SPATA31C1P0DKV0 1188 aa12.41□□□□□ -0.42
NELFE-205ENST00000441998 SRGAP2BP0DMP2 458 aa12.41□□□□□ -0.42
NELFE-205ENST00000441998 RPA1P27694 616 aa12.41□□□□□ -0.42
NELFE-205ENST00000441998 HOXA11P31270 313 aaPredicted RBP12.41□□□□□ -0.42
NELFE-205ENST00000441998 MCM7P33993 719 aa12.41□□□□□ -0.42
NELFE-205ENST00000441998 ARL2P36404 184 aa12.41□□□□□ -0.42
NELFE-205ENST00000441998 FXR2P51116 673 aaKnown RBP eCLIP12.41□□□□□ -0.422e-6■■■■□ 25.2
NELFE-205ENST00000441998 COASYQ13057 564 aa12.41□□□□□ -0.42
NELFE-205ENST00000441998 GNL2Q13823 731 aaKnown RBP12.41□□□□□ -0.42
NELFE-205ENST00000441998 GIT2Q14161 759 aa12.41□□□□□ -0.42
NELFE-205ENST00000441998 SMAD2Q15796 467 aaKnown RBP12.41□□□□□ -0.42
NELFE-205ENST00000441998 CLLU1OSQ5K130 101 aa12.41□□□□□ -0.42
NELFE-205ENST00000441998 HAUS3Q68CZ6 603 aa12.41□□□□□ -0.42
NELFE-205ENST00000441998 CATSPER3Q86XQ3 398 aa12.41□□□□□ -0.42
NELFE-205ENST00000441998 KSR1Q8IVT5 923 aa12.41□□□□□ -0.42
NELFE-205ENST00000441998 GJD3Q8N144 294 aa12.41□□□□□ -0.42
NELFE-205ENST00000441998 RNF149Q8NC42 400 aa12.41□□□□□ -0.42
NELFE-205ENST00000441998 MCPH1Q8NEM0 835 aa12.41□□□□□ -0.42
NELFE-205ENST00000441998 MICAL1Q8TDZ2 1067 aa12.41□□□□□ -0.42
NELFE-205ENST00000441998 CCDC43Q96MW1 224 aaKnown RBP12.41□□□□□ -0.42
NELFE-205ENST00000441998 POP1Q99575 1024 aaKnown RBP12.41□□□□□ -0.42
NELFE-205ENST00000441998 BACH2Q9BYV9 841 aa12.41□□□□□ -0.42
NELFE-205ENST00000441998 RAB34Q9BZG1 259 aa12.41□□□□□ -0.42
NELFE-205ENST00000441998 TLE6Q9H808 572 aa12.41□□□□□ -0.42
NELFE-205ENST00000441998 XPNPEP1Q9NQW7 623 aa12.41□□□□□ -0.42
NELFE-205ENST00000441998 MYH9P35579 1960 aaKnown RBP12.41□□□□□ -0.42
NELFE-205ENST00000441998 INPPL1O15357 1258 aa12.4□□□□□ -0.42
NELFE-205ENST00000441998 CSDE1O75534 798 aaKnown RBP12.4□□□□□ -0.42
NELFE-205ENST00000441998 FGFR4P22455 802 aa12.4□□□□□ -0.42
NELFE-205ENST00000441998 SMAD4Q13485 552 aaKnown RBP12.4□□□□□ -0.42
NELFE-205ENST00000441998 TTC38Q5R3I4 469 aa12.4□□□□□ -0.42
NELFE-205ENST00000441998 NOTUMQ6P988 496 aa12.4□□□□□ -0.42
NELFE-205ENST00000441998 SLC39A11Q8N1S5 342 aa12.4□□□□□ -0.42
NELFE-205ENST00000441998 ZNF668Q96K58 619 aaPredicted RBP12.4□□□□□ -0.42
NELFE-205ENST00000441998 MSLNLQ96KJ4 702 aa12.4□□□□□ -0.42
NELFE-205ENST00000441998 PRIMPOLQ96LW4 560 aa12.4□□□□□ -0.42
NELFE-205ENST00000441998 TBC1D32Q96NH3 1257 aa12.4□□□□□ -0.42
NELFE-205ENST00000441998 TMEM60Q9H2L4 133 aa12.4□□□□□ -0.42
NELFE-205ENST00000441998 CD207Q9UJ71 328 aa12.4□□□□□ -0.42
NELFE-205ENST00000441998 PCDHB2Q9Y5E7 798 aa12.4□□□□□ -0.42
NELFE-205ENST00000441998 IRAK3Q9Y616 596 aa12.4□□□□□ -0.42
NELFE-205ENST00000441998 RALGAPA2Q2PPJ7 1873 aa12.4□□□□□ -0.42
NELFE-205ENST00000441998 C19orf67A6NJJ6 358 aa12.39□□□□□ -0.43
NELFE-205ENST00000441998 PI4K2BG5E9Z4 385 aa12.39□□□□□ -0.43
NELFE-205ENST00000441998 H3BQ06 376 aaPredicted RBP12.39□□□□□ -0.43
NELFE-205ENST00000441998 WNT7AO00755 349 aa12.39□□□□□ -0.43
NELFE-205ENST00000441998 ZBTB39O15060 712 aa12.39□□□□□ -0.43
NELFE-205ENST00000441998 DTNBO60941 627 aa12.39□□□□□ -0.43
NELFE-205ENST00000441998 OFD1O75665 1012 aa12.39□□□□□ -0.43
NELFE-205ENST00000441998 ERLIN2O94905 339 aa12.39□□□□□ -0.43
NELFE-205ENST00000441998 ALADP13716 330 aa12.39□□□□□ -0.43
NELFE-205ENST00000441998 HOXB8P17481 243 aaPredicted RBP12.39□□□□□ -0.43
NELFE-205ENST00000441998 NCLP19338 710 aaKnown RBP12.39□□□□□ -0.43
NELFE-205ENST00000441998 IRS1P35568 1242 aa12.39□□□□□ -0.43
NELFE-205ENST00000441998 PRPHP41219 470 aa12.39□□□□□ -0.43
NELFE-205ENST00000441998 GUCY1B3Q02153 619 aa12.39□□□□□ -0.43
NELFE-205ENST00000441998 DUSP6Q16828 381 aa12.39□□□□□ -0.43
NELFE-205ENST00000441998 NOMO2Q5JPE7 1267 aa12.39□□□□□ -0.43
NELFE-205ENST00000441998 ADHFE1Q8IWW8 467 aa12.39□□□□□ -0.43
NELFE-205ENST00000441998 HACE1Q8IYU2 909 aa12.39□□□□□ -0.43
NELFE-205ENST00000441998 C4orf32Q8N8J7 132 aa12.39□□□□□ -0.43
NELFE-205ENST00000441998 MRPL43Q8N983 215 aaKnown RBP12.39□□□□□ -0.43
NELFE-205ENST00000441998 RNF169Q8NCN4 708 aa12.39□□□□□ -0.43
NELFE-205ENST00000441998 URGCPQ8TCY9 931 aa12.39□□□□□ -0.43
NELFE-205ENST00000441998 HELQQ8TDG4 1101 aa12.39□□□□□ -0.43
NELFE-205ENST00000441998 NECAB3Q96P71 396 aaPredicted RBP12.39□□□□□ -0.43
NELFE-205ENST00000441998 TMEM175Q9BSA9 504 aa12.39□□□□□ -0.43
NELFE-205ENST00000441998 MINDY3Q9H8M7 445 aa12.39□□□□□ -0.43
NELFE-205ENST00000441998 ZMYM2Q9UBW7 1377 aa12.39□□□□□ -0.43
NELFE-205ENST00000441998 REV3LO60673 3130 aa12.38□□□□□ -0.43
NELFE-205ENST00000441998 A0A1B0GUA9 196 aa12.38□□□□□ -0.43
NELFE-205ENST00000441998 POTEMA6NI47 508 aa12.38□□□□□ -0.43
NELFE-205ENST00000441998 MBTPS2O43462 519 aa12.38□□□□□ -0.43
NELFE-205ENST00000441998 CYP11B2P19099 503 aa12.38□□□□□ -0.43
NELFE-205ENST00000441998 ATP2B1P20020 1258 aa12.38□□□□□ -0.43
NELFE-205ENST00000441998 IBSPP21815 317 aaPredicted RBP12.38□□□□□ -0.43
NELFE-205ENST00000441998 TECP42680 631 aa12.38□□□□□ -0.43
NELFE-205ENST00000441998 NRIP1P48552 1158 aa12.38□□□□□ -0.43
NELFE-205ENST00000441998 NDUFV1P49821 464 aa12.38□□□□□ -0.43
NELFE-205ENST00000441998 BCAR1P56945 870 aa12.38□□□□□ -0.43
NELFE-205ENST00000441998 ERVFC1P60507 584 aa12.38□□□□□ -0.43
NELFE-205ENST00000441998 KCNC3Q14003 757 aa12.38□□□□□ -0.43
NELFE-205ENST00000441998 ZNF174Q15697 407 aa12.38□□□□□ -0.43
NELFE-205ENST00000441998 FAM187BQ17R55 369 aa12.38□□□□□ -0.43
NELFE-205ENST00000441998 RILPL1Q5EBL4 403 aa12.38□□□□□ -0.43
NELFE-205ENST00000441998 UBXN11Q5T124 520 aa12.38□□□□□ -0.43
NELFE-205ENST00000441998 PPP4R3CPQ6ZMV5 832 aa12.38□□□□□ -0.43
NELFE-205ENST00000441998 DDX53Q86TM3 631 aaKnown RBP12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms