RNA–Protein interactions for RNA: ENST00000441089.1

PTPN4-206, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 671 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-206ENST00000441089 SALL4Q9UJQ4 1053 aa5.61□□□□□ -1.51
PTPN4-206ENST00000441089 SCN10AQ9Y5Y9 1956 aa5.61□□□□□ -1.51
PTPN4-206ENST00000441089 CACNA1IQ9P0X4 2223 aa5.6□□□□□ -1.51
PTPN4-206ENST00000441089 FAM95CA0A1B0GW59 222 aa5.6□□□□□ -1.51
PTPN4-206ENST00000441089 HIP1O00291 1037 aa5.6□□□□□ -1.51
PTPN4-206ENST00000441089 CYP26A1O43174 497 aa5.6□□□□□ -1.51
PTPN4-206ENST00000441089 PARNO95453 639 aaKnown RBP5.6□□□□□ -1.51
PTPN4-206ENST00000441089 SNAI1O95863 264 aaPredicted RBP5.6□□□□□ -1.51
PTPN4-206ENST00000441089 ZFYP08048 801 aaPredicted RBP5.6□□□□□ -1.51
PTPN4-206ENST00000441089 ICAM3P32942 547 aa5.6□□□□□ -1.51
PTPN4-206ENST00000441089 LTBRP36941 435 aa5.6□□□□□ -1.51
PTPN4-206ENST00000441089 RBM25P49756 843 aaKnown RBP5.6□□□□□ -1.51
PTPN4-206ENST00000441089 WDR5P61964 334 aaKnown RBP5.6□□□□□ -1.51
PTPN4-206ENST00000441089 DNM1Q05193 864 aaKnown RBP5.6□□□□□ -1.51
PTPN4-206ENST00000441089 DMWDQ09019 674 aa5.6□□□□□ -1.51
PTPN4-206ENST00000441089 BFSP2Q13515 415 aa5.6□□□□□ -1.51
PTPN4-206ENST00000441089 RAB3GAP1Q15042 981 aa5.6□□□□□ -1.51
PTPN4-206ENST00000441089 CLUL1Q15846 466 aa5.6□□□□□ -1.51
PTPN4-206ENST00000441089 SHROOM1Q2M3G4 852 aaPredicted RBP5.6□□□□□ -1.51
PTPN4-206ENST00000441089 MCMDC2Q4G0Z9 681 aa5.6□□□□□ -1.51
PTPN4-206ENST00000441089 SLC9C2Q5TAH2 1124 aa5.6□□□□□ -1.51
PTPN4-206ENST00000441089 VPS53Q5VIR6 699 aa5.6□□□□□ -1.51
PTPN4-206ENST00000441089 CASC1Q6TDU7 716 aa5.6□□□□□ -1.51
PTPN4-206ENST00000441089 TICAM2Q86XR7 235 aa5.6□□□□□ -1.51
PTPN4-206ENST00000441089 RIOX2Q8IUF8 465 aa5.6□□□□□ -1.51
PTPN4-206ENST00000441089 C12orf50Q8NA57 414 aaPredicted RBP5.6□□□□□ -1.51
PTPN4-206ENST00000441089 C2CD4AQ8NCU7 369 aaPredicted RBP5.6□□□□□ -1.51
PTPN4-206ENST00000441089 WNT8BQ93098 351 aa5.6□□□□□ -1.51
PTPN4-206ENST00000441089 NSUN4Q96CB9 384 aaKnown RBP5.6□□□□□ -1.51
PTPN4-206ENST00000441089 DDX11Q96FC9 970 aa5.6□□□□□ -1.51
PTPN4-206ENST00000441089 KIF2CQ99661 725 aa5.6□□□□□ -1.51
PTPN4-206ENST00000441089 C22orf23Q9BZE7 217 aa5.6□□□□□ -1.51
PTPN4-206ENST00000441089 AP5M1Q9H0R1 490 aa5.6□□□□□ -1.51
PTPN4-206ENST00000441089 ALDH8A1Q9H2A2 487 aaPredicted RBP5.6□□□□□ -1.51
PTPN4-206ENST00000441089 DNAJC18Q9H819 358 aa5.6□□□□□ -1.51
PTPN4-206ENST00000441089 CABP5Q9NP86 173 aa5.6□□□□□ -1.51
PTPN4-206ENST00000441089 ANO2Q9NQ90 1003 aa5.6□□□□□ -1.51
PTPN4-206ENST00000441089 HELLSQ9NRZ9 838 aa5.6□□□□□ -1.51
PTPN4-206ENST00000441089 DZANK1Q9NVP4 752 aa5.6□□□□□ -1.51
PTPN4-206ENST00000441089 RAI14Q9P0K7 980 aa5.6□□□□□ -1.51
PTPN4-206ENST00000441089 PALD1Q9ULE6 856 aa5.6□□□□□ -1.51
PTPN4-206ENST00000441089 USTQ9Y2C2 406 aa5.6□□□□□ -1.51
PTPN4-206ENST00000441089 INSL6Q9Y581 213 aa5.6□□□□□ -1.51
PTPN4-206ENST00000441089 DMXL2Q8TDJ6 3036 aa5.59□□□□□ -1.51
PTPN4-206ENST00000441089 GRIN2DO15399 1336 aa5.59□□□□□ -1.51
PTPN4-206ENST00000441089 CCDC171Q6TFL3 1326 aa5.59□□□□□ -1.51
PTPN4-206ENST00000441089 ABHD14A-ACY1A0A1B0GW23 586 aa5.59□□□□□ -1.51
PTPN4-206ENST00000441089 H3BNC9 293 aa5.59□□□□□ -1.51
PTPN4-206ENST00000441089 CTAGE5O15320 804 aa5.59□□□□□ -1.51
PTPN4-206ENST00000441089 GPAA1O43292 621 aa5.59□□□□□ -1.51
PTPN4-206ENST00000441089 FLOT1O75955 427 aa5.59□□□□□ -1.51
PTPN4-206ENST00000441089 REC8O95072 547 aa5.59□□□□□ -1.51
PTPN4-206ENST00000441089 EYA4O95677 639 aa5.59□□□□□ -1.51
PTPN4-206ENST00000441089 BAG3O95817 575 aa5.59□□□□□ -1.51
PTPN4-206ENST00000441089 IQCF3P0C7M6 154 aa5.59□□□□□ -1.51
PTPN4-206ENST00000441089 HSPD1P10809 573 aaKnown RBP5.59□□□□□ -1.51
PTPN4-206ENST00000441089 CYP2C9P11712 490 aa5.59□□□□□ -1.51
PTPN4-206ENST00000441089 CYP7A1P22680 504 aa5.59□□□□□ -1.51
PTPN4-206ENST00000441089 HSPA4P34932 840 aa5.59□□□□□ -1.51
PTPN4-206ENST00000441089 DYNLL1P63167 89 aaKnown RBP5.59□□□□□ -1.51
PTPN4-206ENST00000441089 BEX3Q00994 111 aa5.59□□□□□ -1.51
PTPN4-206ENST00000441089 GPM6BQ13491 265 aa5.59□□□□□ -1.51
PTPN4-206ENST00000441089 FSCN1Q16658 493 aaKnown RBP5.59□□□□□ -1.51
PTPN4-206ENST00000441089 PTPN21Q16825 1174 aa5.59□□□□□ -1.51
PTPN4-206ENST00000441089 EPC2Q52LR7 807 aa5.59□□□□□ -1.51
PTPN4-206ENST00000441089 NOL8Q76FK4 1167 aaKnown RBP5.59□□□□□ -1.51
PTPN4-206ENST00000441089 VN1R5Q7Z5H4 357 aa5.59□□□□□ -1.51
PTPN4-206ENST00000441089 ZAR1Q86SH2 424 aa5.59□□□□□ -1.51
PTPN4-206ENST00000441089 LCORLQ8N3X6 602 aa5.59□□□□□ -1.51
PTPN4-206ENST00000441089 C1orf127Q8N9H9 656 aa5.59□□□□□ -1.51
PTPN4-206ENST00000441089 SMG8Q8ND04 991 aaKnown RBP5.59□□□□□ -1.51
PTPN4-206ENST00000441089 ACER1Q8TDN7 264 aa5.59□□□□□ -1.51
PTPN4-206ENST00000441089 RUFY2Q8WXA3 655 aa5.59□□□□□ -1.51
PTPN4-206ENST00000441089 RUBCNQ92622 972 aa5.59□□□□□ -1.51
PTPN4-206ENST00000441089 MAP4K1Q92918 833 aa5.59□□□□□ -1.51
PTPN4-206ENST00000441089 KCNB2Q92953 911 aa5.59□□□□□ -1.51
PTPN4-206ENST00000441089 PPP2R3CQ969Q6 453 aa5.59□□□□□ -1.51
PTPN4-206ENST00000441089 STRBPQ96SI9 672 aaKnown RBP5.59□□□□□ -1.51
PTPN4-206ENST00000441089 RIOK1Q9BRS2 568 aaKnown RBP5.59□□□□□ -1.51
PTPN4-206ENST00000441089 C17orf80Q9BSJ5 609 aa5.59□□□□□ -1.51
PTPN4-206ENST00000441089 DDX24Q9GZR7 859 aaKnown RBP eCLIP5.59□□□□□ -1.51
PTPN4-206ENST00000441089 LRP2BPQ9P2M1 347 aa5.59□□□□□ -1.51
PTPN4-206ENST00000441089 RALYQ9UKM9 306 aaKnown RBP5.59□□□□□ -1.51
PTPN4-206ENST00000441089 TAF6LQ9Y6J9 622 aa5.59□□□□□ -1.51
PTPN4-206ENST00000441089 ZNF462Q96JM2 2506 aa5.59□□□□□ -1.51
PTPN4-206ENST00000441089 MYO5AQ9Y4I1 1855 aaKnown RBP5.58□□□□□ -1.52
PTPN4-206ENST00000441089 A6NHS1 94 aa5.58□□□□□ -1.52
PTPN4-206ENST00000441089 ADCY6O43306 1168 aa5.58□□□□□ -1.52
PTPN4-206ENST00000441089 EPB41L2O43491 1005 aaKnown RBP5.58□□□□□ -1.52
PTPN4-206ENST00000441089 PRKAB2O43741 272 aa5.58□□□□□ -1.52
PTPN4-206ENST00000441089 FAM13AO94988 1023 aa5.58□□□□□ -1.52
PTPN4-206ENST00000441089 MBD4O95243 580 aa5.58□□□□□ -1.52
PTPN4-206ENST00000441089 ADRB1P08588 477 aa5.58□□□□□ -1.52
PTPN4-206ENST00000441089 STAT3P40763 770 aa5.58□□□□□ -1.52
PTPN4-206ENST00000441089 USP5P45974 858 aa5.58□□□□□ -1.52
PTPN4-206ENST00000441089 CLCN5P51795 746 aa5.58□□□□□ -1.52
PTPN4-206ENST00000441089 TNFAIP2Q03169 654 aa5.58□□□□□ -1.52
PTPN4-206ENST00000441089 NECTIN1Q15223 517 aa5.58□□□□□ -1.52
PTPN4-206ENST00000441089 ABCB5Q2M3G0 1257 aa5.58□□□□□ -1.52
PTPN4-206ENST00000441089 CERKLQ49MI3 558 aaPredicted RBP5.58□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms