RNA–Protein interactions for RNA: ENST00000440835.6

PTPRR-204, Transcript of protein tyrosine phosphatase, receptor type R, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRR, Length 2,818 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRR-204ENST00000440835 CNNM3Q8NE01 707 aa6.73□□□□□ -1.33
PTPRR-204ENST00000440835 SLC5A5Q92911 643 aa6.73□□□□□ -1.33
PTPRR-204ENST00000440835 PGBD4Q96DM1 585 aa6.73□□□□□ -1.33
PTPRR-204ENST00000440835 ASIC4Q96FT7 647 aa6.73□□□□□ -1.33
PTPRR-204ENST00000440835 AGXT2Q9BYV1 514 aa6.73□□□□□ -1.33
PTPRR-204ENST00000440835 GCOM2Q9BZD3 368 aaPredicted RBP6.73□□□□□ -1.33
PTPRR-204ENST00000440835 UBN1Q9NPG3 1134 aa6.73□□□□□ -1.33
PTPRR-204ENST00000440835 ENTPD7Q9NQZ7 604 aa6.73□□□□□ -1.33
PTPRR-204ENST00000440835 PKD2L1Q9P0L9 805 aa6.73□□□□□ -1.33
PTPRR-204ENST00000440835 KANSL3Q9P2N6 904 aa6.73□□□□□ -1.33
PTPRR-204ENST00000440835 CDH23Q9H251 3354 aa6.73□□□□□ -1.33
PTPRR-204ENST00000440835 FAM86B1E9PN63 330 aa6.72□□□□□ -1.33
PTPRR-204ENST00000440835 K7ELQ4 463 aaPredicted RBP6.72□□□□□ -1.33
PTPRR-204ENST00000440835 GALR2O43603 387 aaPredicted RBP6.72□□□□□ -1.33
PTPRR-204ENST00000440835 FAM86B2P0C5J1 330 aa6.72□□□□□ -1.33
PTPRR-204ENST00000440835 HSPA4P34932 840 aa6.72□□□□□ -1.33
PTPRR-204ENST00000440835 METAP2P50579 478 aaKnown RBP eCLIP6.72□□□□□ -1.33
PTPRR-204ENST00000440835 XKR3Q5GH77 459 aa6.72□□□□□ -1.33
PTPRR-204ENST00000440835 RNF214Q8ND24 703 aa6.72□□□□□ -1.33
PTPRR-204ENST00000440835 PRSS33Q8NF86 280 aa6.72□□□□□ -1.33
PTPRR-204ENST00000440835 CMASQ8NFW8 434 aaPredicted RBP6.72□□□□□ -1.33
PTPRR-204ENST00000440835 TRAPPC12Q8WVT3 735 aa6.72□□□□□ -1.33
PTPRR-204ENST00000440835 TCF25Q9BQ70 676 aa6.72□□□□□ -1.33
PTPRR-204ENST00000440835 TMEM175Q9BSA9 504 aa6.72□□□□□ -1.33
PTPRR-204ENST00000440835 TEKT3Q9BXF9 490 aa6.72□□□□□ -1.33
PTPRR-204ENST00000440835 TMEM63CQ9P1W3 806 aa6.72□□□□□ -1.33
PTPRR-204ENST00000440835 PIEZO1Q92508 2521 aa6.72□□□□□ -1.33
PTPRR-204ENST00000440835 IGKV6-21A0A0C4DH24 114 aa6.72□□□□□ -1.33
PTPRR-204ENST00000440835 KLF18A0A0U1RQI7 1052 aa6.72□□□□□ -1.33
PTPRR-204ENST00000440835 ATP4AP20648 1035 aa6.72□□□□□ -1.33
PTPRR-204ENST00000440835 TECP42680 631 aa6.72□□□□□ -1.33
PTPRR-204ENST00000440835 ALDH7A1P49419 539 aaKnown RBP6.72□□□□□ -1.33
PTPRR-204ENST00000440835 GPC3P51654 580 aa6.72□□□□□ -1.33
PTPRR-204ENST00000440835 CLCN5P51795 746 aa6.72□□□□□ -1.33
PTPRR-204ENST00000440835 TMEM62Q0P6H9 643 aa6.72□□□□□ -1.33
PTPRR-204ENST00000440835 TARBP2Q15633 366 aaKnown RBP6.72□□□□□ -1.33
PTPRR-204ENST00000440835 CLUL1Q15846 466 aa6.72□□□□□ -1.33
PTPRR-204ENST00000440835 TYW1BQ6NUM6 668 aa6.72□□□□□ -1.33
PTPRR-204ENST00000440835 EFCAB12Q6NXP0 572 aa6.72□□□□□ -1.33
PTPRR-204ENST00000440835 DAGLBQ8NCG7 672 aa6.72□□□□□ -1.33
PTPRR-204ENST00000440835 CYP2W1Q8TAV3 490 aa6.72□□□□□ -1.33
PTPRR-204ENST00000440835 NXPE3Q969Y0 559 aa6.72□□□□□ -1.33
PTPRR-204ENST00000440835 CCDC51Q96ER9 411 aa6.72□□□□□ -1.33
PTPRR-204ENST00000440835 MBOAT7Q96N66 472 aa6.72□□□□□ -1.33
PTPRR-204ENST00000440835 SEMA4AQ9H3S1 761 aa6.72□□□□□ -1.33
PTPRR-204ENST00000440835 DISC1Q9NRI5 854 aa6.72□□□□□ -1.33
PTPRR-204ENST00000440835 FAM217BQ9NTX9 383 aaPredicted RBP6.72□□□□□ -1.33
PTPRR-204ENST00000440835 RNF19AQ9NV58 838 aa6.72□□□□□ -1.33
PTPRR-204ENST00000440835 GABBR1Q9UBS5 961 aa6.72□□□□□ -1.33
PTPRR-204ENST00000440835 BARX2Q9UMQ3 279 aaPredicted RBP6.72□□□□□ -1.33
PTPRR-204ENST00000440835 MUC6Q6W4X9 2439 aa6.72□□□□□ -1.33
PTPRR-204ENST00000440835 TECTAO75443 2155 aa6.72□□□□□ -1.33
PTPRR-204ENST00000440835 SYCE3A1L190 88 aa6.72□□□□□ -1.33
PTPRR-204ENST00000440835 C2orf71A6NGG8 1288 aa6.72□□□□□ -1.33
PTPRR-204ENST00000440835 ASAP2O43150 1006 aa6.72□□□□□ -1.33
PTPRR-204ENST00000440835 IFNAR1P17181 557 aa6.72□□□□□ -1.33
PTPRR-204ENST00000440835 AVPR2P30518 371 aa6.72□□□□□ -1.33
PTPRR-204ENST00000440835 ERVFC1P60507 584 aa6.72□□□□□ -1.33
PTPRR-204ENST00000440835 GABPB1Q06547 395 aaPredicted RBP6.72□□□□□ -1.33
PTPRR-204ENST00000440835 TBC1D8BQ0IIM8 1120 aa6.72□□□□□ -1.33
PTPRR-204ENST00000440835 PKP1Q13835 747 aa6.72□□□□□ -1.33
PTPRR-204ENST00000440835 NONOQ15233 471 aaKnown RBP eCLIP6.72□□□□□ -1.33
PTPRR-204ENST00000440835 FAM102BQ5T8I3 360 aa6.72□□□□□ -1.33
PTPRR-204ENST00000440835 SYCE2Q6PIF2 218 aa6.72□□□□□ -1.33
PTPRR-204ENST00000440835 LRSAM1Q6UWE0 723 aa6.72□□□□□ -1.33
PTPRR-204ENST00000440835 CMTR1Q8N1G2 835 aaKnown RBP6.72□□□□□ -1.33
PTPRR-204ENST00000440835 METTL13Q8N6R0 699 aa6.72□□□□□ -1.33
PTPRR-204ENST00000440835 TMEM40Q8WWA1 233 aa6.72□□□□□ -1.33
PTPRR-204ENST00000440835 TMEM169Q96HH4 297 aa6.72□□□□□ -1.33
PTPRR-204ENST00000440835 CHAMP1Q96JM3 812 aa6.72□□□□□ -1.33
PTPRR-204ENST00000440835 OSMRQ99650 979 aa6.72□□□□□ -1.33
PTPRR-204ENST00000440835 OGFRQ9NZT2 677 aa6.72□□□□□ -1.33
PTPRR-204ENST00000440835 AKT3Q9Y243 479 aa6.72□□□□□ -1.33
PTPRR-204ENST00000440835 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP6.71□□□□□ -1.34
PTPRR-204ENST00000440835 INPPL1O15357 1258 aa6.71□□□□□ -1.34
PTPRR-204ENST00000440835 GAS7O60861 476 aa6.71□□□□□ -1.34
PTPRR-204ENST00000440835 CLASP2O75122 1294 aaKnown RBP6.71□□□□□ -1.34
PTPRR-204ENST00000440835 CTSAP10619 480 aa6.71□□□□□ -1.34
PTPRR-204ENST00000440835 GCFC2P16383 781 aaKnown RBP6.71□□□□□ -1.34
PTPRR-204ENST00000440835 RXRAP19793 462 aa6.71□□□□□ -1.34
PTPRR-204ENST00000440835 AXLP30530 894 aa6.71□□□□□ -1.34
PTPRR-204ENST00000440835 RFC5P40937 340 aa6.71□□□□□ -1.34
PTPRR-204ENST00000440835 NLRP11P59045 1033 aaKnown RBP6.71□□□□□ -1.34
PTPRR-204ENST00000440835 CREMQ03060 361 aa6.71□□□□□ -1.34
PTPRR-204ENST00000440835 KIZQ2M2Z5 673 aa6.71□□□□□ -1.34
PTPRR-204ENST00000440835 ATAT1Q5SQI0 421 aa6.71□□□□□ -1.34
PTPRR-204ENST00000440835 GLB1LQ6UWU2 654 aa6.71□□□□□ -1.34
PTPRR-204ENST00000440835 TMC7Q7Z402 723 aa6.71□□□□□ -1.34
PTPRR-204ENST00000440835 TRIM22Q8IYM9 498 aa6.71□□□□□ -1.34
PTPRR-204ENST00000440835 TDRD5Q8NAT2 981 aaKnown RBP6.71□□□□□ -1.34
PTPRR-204ENST00000440835 VN1R2Q8NFZ6 395 aa6.71□□□□□ -1.34
PTPRR-204ENST00000440835 URGCPQ8TCY9 931 aa6.71□□□□□ -1.34
PTPRR-204ENST00000440835 ACSF2Q96CM8 615 aaPredicted RBP6.71□□□□□ -1.34
PTPRR-204ENST00000440835 TIGD1Q96MW7 591 aa6.71□□□□□ -1.34
PTPRR-204ENST00000440835 EMILIN2Q9BXX0 1053 aa6.71□□□□□ -1.34
PTPRR-204ENST00000440835 ZBP1Q9H171 429 aa6.71□□□□□ -1.34
PTPRR-204ENST00000440835 RIOK3O14730 519 aaKnown RBP6.71□□□□□ -1.34
PTPRR-204ENST00000440835 TBX3O15119 743 aa6.71□□□□□ -1.34
PTPRR-204ENST00000440835 MAFO75444 373 aaPredicted RBP6.71□□□□□ -1.34
PTPRR-204ENST00000440835 NBL1P41271 181 aa6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 83.5 ms