RNA–Protein interactions for RNA: ENST00000439468.1

VPS41-207, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5

Gene VPS41, Length 354 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-207ENST00000439468 TNFRSF1AP19438 455 aa4.74□□□□□ -1.65
VPS41-207ENST00000439468 RPS19P39019 145 aaKnown RBP4.74□□□□□ -1.65
VPS41-207ENST00000439468 RAB27AP51159 221 aa4.74□□□□□ -1.65
VPS41-207ENST00000439468 PHC1P78364 1004 aa4.74□□□□□ -1.65
VPS41-207ENST00000439468 ZXDAP98168 799 aa4.74□□□□□ -1.65
VPS41-207ENST00000439468 MCL1Q07820 350 aa4.74□□□□□ -1.65
VPS41-207ENST00000439468 NFYCQ13952 458 aa4.74□□□□□ -1.65
VPS41-207ENST00000439468 CDSNQ15517 529 aa4.74□□□□□ -1.65
VPS41-207ENST00000439468 PTPN21Q16825 1174 aa4.74□□□□□ -1.65
VPS41-207ENST00000439468 TRIM68Q6AZZ1 485 aa4.74□□□□□ -1.65
VPS41-207ENST00000439468 KLHDC10Q6PID8 442 aa4.74□□□□□ -1.65
VPS41-207ENST00000439468 UNQ6494/PRO21346Q6UXR6 183 aa4.74□□□□□ -1.65
VPS41-207ENST00000439468 POLNQ7Z5Q5 900 aa4.74□□□□□ -1.65
VPS41-207ENST00000439468 C7orf31Q8N865 590 aa4.74□□□□□ -1.65
VPS41-207ENST00000439468 OR5AN1Q8NGI8 311 aa4.74□□□□□ -1.65
VPS41-207ENST00000439468 RPGRQ92834 1020 aaKnown RBP4.74□□□□□ -1.65
VPS41-207ENST00000439468 TSR2Q969E8 191 aaKnown RBP4.74□□□□□ -1.65
VPS41-207ENST00000439468 TMEM176AQ96HP8 235 aa4.74□□□□□ -1.65
VPS41-207ENST00000439468 MAML3Q96JK9 1138 aa4.74□□□□□ -1.65
VPS41-207ENST00000439468 WWC2-AS2Q96NR7 200 aa4.74□□□□□ -1.65
VPS41-207ENST00000439468 TMPRSS5Q9H3S3 457 aa4.74□□□□□ -1.65
VPS41-207ENST00000439468 POFUT1Q9H488 388 aa4.74□□□□□ -1.65
VPS41-207ENST00000439468 PRDM12Q9H4Q4 367 aa4.74□□□□□ -1.65
VPS41-207ENST00000439468 FZD9O00144 591 aa4.73□□□□□ -1.65
VPS41-207ENST00000439468 MATN2O00339 956 aa4.73□□□□□ -1.65
VPS41-207ENST00000439468 PCDHGA12O60330 932 aa4.73□□□□□ -1.65
VPS41-207ENST00000439468 ACO1P21399 889 aaKnown RBP4.73□□□□□ -1.65
VPS41-207ENST00000439468 CD40P25942 277 aa4.73□□□□□ -1.65
VPS41-207ENST00000439468 MSX2P35548 267 aaPredicted RBP4.73□□□□□ -1.65
VPS41-207ENST00000439468 GPR3P46089 330 aa4.73□□□□□ -1.65
VPS41-207ENST00000439468 NEK2P51955 445 aa4.73□□□□□ -1.65
VPS41-207ENST00000439468 LRRC32Q14392 662 aa4.73□□□□□ -1.65
VPS41-207ENST00000439468 ODF1Q14990 250 aa4.73□□□□□ -1.65
VPS41-207ENST00000439468 DGKDQ16760 1214 aa4.73□□□□□ -1.65
VPS41-207ENST00000439468 NRN1LQ496H8 165 aa4.73□□□□□ -1.65
VPS41-207ENST00000439468 ZBTB41Q5SVQ8 909 aa4.73□□□□□ -1.65
VPS41-207ENST00000439468 TIGD7Q6NT04 549 aaPredicted RBP4.73□□□□□ -1.65
VPS41-207ENST00000439468 PGM2L1Q6PCE3 622 aa4.73□□□□□ -1.65
VPS41-207ENST00000439468 NME9Q86XW9 330 aa4.73□□□□□ -1.65
VPS41-207ENST00000439468 FMNL3Q8IVF7 1028 aa4.73□□□□□ -1.65
VPS41-207ENST00000439468 SHCBP1Q8NEM2 672 aa4.73□□□□□ -1.65
VPS41-207ENST00000439468 LMBR1Q8WVP7 490 aa4.73□□□□□ -1.65
VPS41-207ENST00000439468 GCDHQ92947 438 aaPredicted RBP4.73□□□□□ -1.65
VPS41-207ENST00000439468 HOOK2Q96ED9 719 aa4.73□□□□□ -1.65
VPS41-207ENST00000439468 FAM89AQ96GI7 184 aa4.73□□□□□ -1.65
VPS41-207ENST00000439468 FUBP3Q96I24 572 aaKnown RBP eCLIP4.73□□□□□ -1.65
VPS41-207ENST00000439468 MYL10Q9BUA6 226 aa4.73□□□□□ -1.65
VPS41-207ENST00000439468 VPS11Q9H270 941 aa4.73□□□□□ -1.65
VPS41-207ENST00000439468 METTL14Q9HCE5 456 aaKnown RBP4.73□□□□□ -1.65
VPS41-207ENST00000439468 DENND2AQ9ULE3 1009 aa4.73□□□□□ -1.65
VPS41-207ENST00000439468 PCDHGA9Q9Y5G4 932 aaKnown RBP4.73□□□□□ -1.65
VPS41-207ENST00000439468 PCDHGA8Q9Y5G5 932 aa4.73□□□□□ -1.65
VPS41-207ENST00000439468 PCDHGA7Q9Y5G6 932 aa4.73□□□□□ -1.65
VPS41-207ENST00000439468 PCDHGA6Q9Y5G7 932 aa4.73□□□□□ -1.65
VPS41-207ENST00000439468 PCDHGA3Q9Y5H0 932 aa4.73□□□□□ -1.65
VPS41-207ENST00000439468 PCDHGA2Q9Y5H1 932 aa4.73□□□□□ -1.65
VPS41-207ENST00000439468 EID1Q9Y6B2 187 aa4.73□□□□□ -1.65
VPS41-207ENST00000439468 SHTN1A0MZ66 631 aa4.72□□□□□ -1.65
VPS41-207ENST00000439468 PRSS38A1L453 326 aa4.72□□□□□ -1.65
VPS41-207ENST00000439468 SLC26A4O43511 780 aa4.72□□□□□ -1.65
VPS41-207ENST00000439468 PRPF6O94906 941 aaKnown RBP4.72□□□□□ -1.65
VPS41-207ENST00000439468 FSHBP01225 129 aa4.72□□□□□ -1.65
VPS41-207ENST00000439468 LPLP06858 475 aa4.72□□□□□ -1.65
VPS41-207ENST00000439468 C6P13671 934 aa4.72□□□□□ -1.65
VPS41-207ENST00000439468 SESN2P58004 480 aaPredicted RBP4.72□□□□□ -1.65
VPS41-207ENST00000439468 ATP2C1P98194 919 aaPredicted RBP4.72□□□□□ -1.65
VPS41-207ENST00000439468 HHEXQ03014 270 aa4.72□□□□□ -1.65
VPS41-207ENST00000439468 KLF1Q13351 362 aaPredicted RBP4.72□□□□□ -1.65
VPS41-207ENST00000439468 GRM7Q14831 915 aa4.72□□□□□ -1.65
VPS41-207ENST00000439468 MYBPC3Q14896 1274 aa4.72□□□□□ -1.65
VPS41-207ENST00000439468 EPHA7Q15375 998 aa4.72□□□□□ -1.65
VPS41-207ENST00000439468 GPR158Q5T848 1215 aa4.72□□□□□ -1.65
VPS41-207ENST00000439468 FRMD7Q6ZUT3 714 aa4.72□□□□□ -1.65
VPS41-207ENST00000439468 C1orf162Q8NEQ5 155 aaPredicted RBP4.72□□□□□ -1.65
VPS41-207ENST00000439468 CFHR4Q92496 578 aa4.72□□□□□ -1.65
VPS41-207ENST00000439468 EAF2Q96CJ1 260 aaPredicted RBP4.72□□□□□ -1.65
VPS41-207ENST00000439468 DYDC2Q96IM9 177 aa4.72□□□□□ -1.65
VPS41-207ENST00000439468 FAXDC2Q96IV6 333 aa4.72□□□□□ -1.65
VPS41-207ENST00000439468 SLC2A13Q96QE2 648 aa4.72□□□□□ -1.65
VPS41-207ENST00000439468 ZNF341Q9BYN7 854 aa4.72□□□□□ -1.65
VPS41-207ENST00000439468 AASDHPPTQ9NRN7 309 aa4.72□□□□□ -1.65
VPS41-207ENST00000439468 CHPF2Q9P2E5 772 aa4.72□□□□□ -1.65
VPS41-207ENST00000439468 DNAI1Q9UI46 699 aa4.72□□□□□ -1.65
VPS41-207ENST00000439468 VWA7Q9Y334 891 aa4.72□□□□□ -1.65
VPS41-207ENST00000439468 RBM8AQ9Y5S9 174 aaKnown RBP4.72□□□□□ -1.65
VPS41-207ENST00000439468 SLC30A1Q9Y6M5 507 aa4.72□□□□□ -1.65
VPS41-207ENST00000439468 A0A1W2PRX2 142 aa4.71□□□□□ -1.66
VPS41-207ENST00000439468 K7ESF4 209 aa4.71□□□□□ -1.66
VPS41-207ENST00000439468 AKAP10O43572 662 aa4.71□□□□□ -1.66
VPS41-207ENST00000439468 AMHP03971 560 aa4.71□□□□□ -1.66
VPS41-207ENST00000439468 TACR2P21452 398 aa4.71□□□□□ -1.66
VPS41-207ENST00000439468 ADCY2Q08462 1091 aa4.71□□□□□ -1.66
VPS41-207ENST00000439468 ADCY1Q08828 1119 aa4.71□□□□□ -1.66
VPS41-207ENST00000439468 RIN1Q13671 783 aa4.71□□□□□ -1.66
VPS41-207ENST00000439468 ACAP1Q15027 740 aa4.71□□□□□ -1.66
VPS41-207ENST00000439468 R3HDM1Q15032 1099 aaKnown RBP4.71□□□□□ -1.66
VPS41-207ENST00000439468 USP39Q53GS9 565 aaKnown RBP4.71□□□□□ -1.66
VPS41-207ENST00000439468 KRT40Q6A162 431 aa4.71□□□□□ -1.66
VPS41-207ENST00000439468 CCDC62Q6P9F0 684 aa4.71□□□□□ -1.66
VPS41-207ENST00000439468 ZBTB46Q86UZ6 589 aa4.71□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms