RNA–Protein interactions for RNA: ENST00000439369.6

SCLT1-202, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 966 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-202ENST00000439369 GCNT3O95395 438 aa13.96□□□□□ -0.17
SCLT1-202ENST00000439369 VTNP04004 478 aa13.96□□□□□ -0.17
SCLT1-202ENST00000439369 ERCC5P28715 1186 aaPredicted RBP13.96□□□□□ -0.17
SCLT1-202ENST00000439369 NMT1P30419 496 aaKnown RBP13.96□□□□□ -0.17
SCLT1-202ENST00000439369 NLRP11P59045 1033 aaKnown RBP13.96□□□□□ -0.17
SCLT1-202ENST00000439369 BFSP2Q13515 415 aa13.96□□□□□ -0.17
SCLT1-202ENST00000439369 FAM187BQ17R55 369 aa13.96□□□□□ -0.17
SCLT1-202ENST00000439369 L1TD1Q5T7N2 865 aaKnown RBP13.96□□□□□ -0.17
SCLT1-202ENST00000439369 LRSAM1Q6UWE0 723 aa13.96□□□□□ -0.17
SCLT1-202ENST00000439369 MAP4K3Q8IVH8 894 aa13.96□□□□□ -0.17
SCLT1-202ENST00000439369 USP38Q8NB14 1042 aa13.96□□□□□ -0.17
SCLT1-202ENST00000439369 PPP1R13LQ8WUF5 828 aa13.96□□□□□ -0.17
SCLT1-202ENST00000439369 NLRP7Q8WX94 980 aa13.96□□□□□ -0.17
SCLT1-202ENST00000439369 ABHD8Q96I13 439 aa13.96□□□□□ -0.17
SCLT1-202ENST00000439369 PRIMPOLQ96LW4 560 aa13.96□□□□□ -0.17
SCLT1-202ENST00000439369 NLRP4Q96MN2 994 aa13.96□□□□□ -0.17
SCLT1-202ENST00000439369 ACCSQ96QU6 501 aa13.96□□□□□ -0.17
SCLT1-202ENST00000439369 CELF4Q9BZC1 486 aaKnown RBP13.96□□□□□ -0.17
SCLT1-202ENST00000439369 CCDC113Q9H0I3 377 aa13.96□□□□□ -0.17
SCLT1-202ENST00000439369 GZF1Q9H116 711 aaPredicted RBP13.96□□□□□ -0.17
SCLT1-202ENST00000439369 IFT122Q9HBG6 1241 aa13.96□□□□□ -0.17
SCLT1-202ENST00000439369 POLD4Q9HCU8 107 aa13.96□□□□□ -0.17
SCLT1-202ENST00000439369 CGNQ9P2M7 1197 aaKnown RBP13.96□□□□□ -0.17
SCLT1-202ENST00000439369 GDAQ9Y2T3 454 aa13.96□□□□□ -0.17
SCLT1-202ENST00000439369 TRPV2Q9Y5S1 764 aa13.96□□□□□ -0.17
SCLT1-202ENST00000439369 MYH11P35749 1972 aa13.96□□□□□ -0.18
SCLT1-202ENST00000439369 ADGRA3Q8IWK6 1321 aa13.95□□□□□ -0.18
SCLT1-202ENST00000439369 DENND3A2RUS2 1198 aa13.95□□□□□ -0.18
SCLT1-202ENST00000439369 PPP1R3GB7ZBB8 358 aa13.95□□□□□ -0.18
SCLT1-202ENST00000439369 K7ERI5 159 aa13.95□□□□□ -0.18
SCLT1-202ENST00000439369 PARNO95453 639 aaKnown RBP13.95□□□□□ -0.18
SCLT1-202ENST00000439369 SRGAP2CP0DJJ0 459 aa13.95□□□□□ -0.18
SCLT1-202ENST00000439369 DARSP14868 501 aaKnown RBP13.95□□□□□ -0.18
SCLT1-202ENST00000439369 PRCPP42785 496 aa13.95□□□□□ -0.18
SCLT1-202ENST00000439369 MGAT3Q09327 533 aa13.95□□□□□ -0.18
SCLT1-202ENST00000439369 STRN3Q13033 797 aa13.95□□□□□ -0.18
SCLT1-202ENST00000439369 MAPK6Q16659 721 aa13.95□□□□□ -0.18
SCLT1-202ENST00000439369 KNOP1Q1ED39 458 aaKnown RBP13.95□□□□□ -0.18
SCLT1-202ENST00000439369 DPCR1Q3MIW9 517 aa13.95□□□□□ -0.18
SCLT1-202ENST00000439369 COL13A1Q5TAT6 717 aaPredicted RBP13.95□□□□□ -0.18
SCLT1-202ENST00000439369 KSR1Q8IVT5 923 aa13.95□□□□□ -0.18
SCLT1-202ENST00000439369 GOLGA5Q8TBA6 731 aa13.95□□□□□ -0.18
SCLT1-202ENST00000439369 TMEM174Q8WUU8 243 aa13.95□□□□□ -0.18
SCLT1-202ENST00000439369 SCFD1Q8WVM8 642 aa13.95□□□□□ -0.18
SCLT1-202ENST00000439369 DHX38Q92620 1227 aaKnown RBP13.95□□□□□ -0.18
SCLT1-202ENST00000439369 HPS3Q969F9 1004 aa13.95□□□□□ -0.18
SCLT1-202ENST00000439369 SCLT1Q96NL6 688 aa13.95□□□□□ -0.18
SCLT1-202ENST00000439369 BPIFA3Q9BQP9 254 aa13.95□□□□□ -0.18
SCLT1-202ENST00000439369 FZD8Q9H461 694 aa13.95□□□□□ -0.18
SCLT1-202ENST00000439369 PRMT7Q9NVM4 692 aaPredicted RBP13.95□□□□□ -0.18
SCLT1-202ENST00000439369 TBC1D7Q9P0N9 293 aa13.95□□□□□ -0.18
SCLT1-202ENST00000439369 TBX20Q9UMR3 447 aa13.95□□□□□ -0.18
SCLT1-202ENST00000439369 A0A087WZ62 844 aa13.94□□□□□ -0.18
SCLT1-202ENST00000439369 BICDL2A1A5D9 508 aa13.94□□□□□ -0.18
SCLT1-202ENST00000439369 PIGRP01833 764 aa13.94□□□□□ -0.18
SCLT1-202ENST00000439369 MYBP10242 640 aa13.94□□□□□ -0.18
SCLT1-202ENST00000439369 CKBP12277 381 aa13.94□□□□□ -0.18
SCLT1-202ENST00000439369 EN2P19622 333 aaPredicted RBP13.94□□□□□ -0.18
SCLT1-202ENST00000439369 EIF4BP23588 611 aaKnown RBP13.94□□□□□ -0.18
SCLT1-202ENST00000439369 THPOP40225 353 aa13.94□□□□□ -0.18
SCLT1-202ENST00000439369 CASP5P51878 434 aa13.94□□□□□ -0.18
SCLT1-202ENST00000439369 ATN1P54259 1190 aaPredicted RBP13.94□□□□□ -0.18
SCLT1-202ENST00000439369 TLE2Q04725 743 aa13.94□□□□□ -0.18
SCLT1-202ENST00000439369 MBTD1Q05BQ5 628 aa13.94□□□□□ -0.18
SCLT1-202ENST00000439369 LRRC63Q05C16 580 aa13.94□□□□□ -0.18
SCLT1-202ENST00000439369 HSP90AA2PQ14568 343 aaPredicted RBP13.94□□□□□ -0.18
SCLT1-202ENST00000439369 KIZQ2M2Z5 673 aa13.94□□□□□ -0.18
SCLT1-202ENST00000439369 TRIM60Q495X7 471 aa13.94□□□□□ -0.18
SCLT1-202ENST00000439369 ISM2Q6H9L7 571 aa13.94□□□□□ -0.18
SCLT1-202ENST00000439369 CENPPQ6IPU0 288 aa13.94□□□□□ -0.18
SCLT1-202ENST00000439369 ZPBP2Q6X784 338 aa13.94□□□□□ -0.18
SCLT1-202ENST00000439369 WNT8BQ93098 351 aa13.94□□□□□ -0.18
SCLT1-202ENST00000439369 FDXACB1Q9BRP7 624 aaPredicted RBP13.94□□□□□ -0.18
SCLT1-202ENST00000439369 TSPY26PQ9H489 355 aa13.94□□□□□ -0.18
SCLT1-202ENST00000439369 RWDD2AQ9UIY3 292 aa13.94□□□□□ -0.18
SCLT1-202ENST00000439369 CDY2AQ9Y6F7 541 aa13.94□□□□□ -0.18
SCLT1-202ENST00000439369 SIP14410 1827 aa13.94□□□□□ -0.18
SCLT1-202ENST00000439369 EVPLQ92817 2033 aa13.93□□□□□ -0.18
SCLT1-202ENST00000439369 ACKR2O00590 384 aa13.93□□□□□ -0.18
SCLT1-202ENST00000439369 PDXKO00764 312 aa13.93□□□□□ -0.18
SCLT1-202ENST00000439369 PQBP1O60828 265 aaKnown RBP13.93□□□□□ -0.18
SCLT1-202ENST00000439369 PRKCBP05771 671 aa13.93□□□□□ -0.18
SCLT1-202ENST00000439369 SELPP16109 830 aa13.93□□□□□ -0.18
SCLT1-202ENST00000439369 SFPQP23246 707 aaKnown RBP eCLIP13.93□□□□□ -0.18
SCLT1-202ENST00000439369 CCNE1P24864 410 aa13.93□□□□□ -0.18
SCLT1-202ENST00000439369 AXLP30530 894 aa13.93□□□□□ -0.18
SCLT1-202ENST00000439369 NCBP1Q09161 790 aaKnown RBP13.93□□□□□ -0.18
SCLT1-202ENST00000439369 FAAP100Q0VG06 881 aa13.93□□□□□ -0.18
SCLT1-202ENST00000439369 PAK1Q13153 545 aa13.93□□□□□ -0.18
SCLT1-202ENST00000439369 NFIL3Q16649 462 aa13.93□□□□□ -0.18
SCLT1-202ENST00000439369 LRRC26Q2I0M4 334 aa13.93□□□□□ -0.18
SCLT1-202ENST00000439369 ZC2HC1CQ53FD0 456 aaPredicted RBP13.93□□□□□ -0.18
SCLT1-202ENST00000439369 HS2ST1Q7LGA3 356 aa13.93□□□□□ -0.18
SCLT1-202ENST00000439369 SMYD4Q8IYR2 804 aaPredicted RBP13.93□□□□□ -0.18
SCLT1-202ENST00000439369 GLIS3Q8NEA6 775 aa13.93□□□□□ -0.18
SCLT1-202ENST00000439369 P2RX5Q93086 422 aa13.93□□□□□ -0.18
SCLT1-202ENST00000439369 TSG101Q99816 390 aa13.93□□□□□ -0.18
SCLT1-202ENST00000439369 KIFC3Q9BVG8 833 aa13.93□□□□□ -0.18
SCLT1-202ENST00000439369 NOC4LQ9BVI4 516 aaKnown RBP13.93□□□□□ -0.18
SCLT1-202ENST00000439369 MRPL4Q9BYD3 311 aaKnown RBP13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms