RNA–Protein interactions for RNA: ENST00000439316.6

CLCNKA-203, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 2 BASIC

Gene CLCNKA, Length 1,997 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-203ENST00000439316 DRAP1Q14919 205 aaPredicted RBP17.78■□□□□ 0.44
CLCNKA-203ENST00000439316 MMS22LQ6ZRQ5 1243 aa17.78■□□□□ 0.44
CLCNKA-203ENST00000439316 SUGP1Q8IWZ8 645 aaKnown RBP17.78■□□□□ 0.44
CLCNKA-203ENST00000439316 MYCT1Q8N699 235 aa17.78■□□□□ 0.44
CLCNKA-203ENST00000439316 PIGOQ8TEQ8 1089 aa17.78■□□□□ 0.44
CLCNKA-203ENST00000439316 WDR18Q9BV38 432 aa17.78■□□□□ 0.44
CLCNKA-203ENST00000439316 DEFB129Q9H1M3 183 aa17.78■□□□□ 0.44
CLCNKA-203ENST00000439316 PARVGQ9HBI0 331 aa17.78■□□□□ 0.44
CLCNKA-203ENST00000439316 OSGEPQ9NPF4 335 aa17.78■□□□□ 0.44
CLCNKA-203ENST00000439316 FAM114A2Q9NRY5 505 aa17.78■□□□□ 0.44
CLCNKA-203ENST00000439316 DMAC2Q9NW81 257 aa17.78■□□□□ 0.44
CLCNKA-203ENST00000439316 DNAJC12Q9UKB3 198 aa17.78■□□□□ 0.44
CLCNKA-203ENST00000439316 IGSF9BQ9UPX0 1349 aa17.78■□□□□ 0.44
CLCNKA-203ENST00000439316 DAAM1Q9Y4D1 1078 aa17.78■□□□□ 0.44
CLCNKA-203ENST00000439316 POLR2AP24928 1970 aaKnown RBP17.77■□□□□ 0.44
CLCNKA-203ENST00000439316 SLITRK3O94933 977 aa17.77■□□□□ 0.44
CLCNKA-203ENST00000439316 HPDP32754 393 aaPredicted RBP17.77■□□□□ 0.44
CLCNKA-203ENST00000439316 ZNF131P52739 623 aa17.77■□□□□ 0.44
CLCNKA-203ENST00000439316 SEC24CP53992 1094 aa17.77■□□□□ 0.44
CLCNKA-203ENST00000439316 MAP3K10Q02779 954 aa17.77■□□□□ 0.44
CLCNKA-203ENST00000439316 ZC2HC1CQ53FD0 456 aaPredicted RBP17.77■□□□□ 0.44
CLCNKA-203ENST00000439316 OTOP1Q7RTM1 612 aa17.77■□□□□ 0.44
CLCNKA-203ENST00000439316 TEX2Q8IWB9 1127 aa17.77■□□□□ 0.44
CLCNKA-203ENST00000439316 SLC35G2Q8TBE7 412 aa17.77■□□□□ 0.44
CLCNKA-203ENST00000439316 SEL1LQ9UBV2 794 aa17.77■□□□□ 0.44
CLCNKA-203ENST00000439316 ZBTB21Q9ULJ3 1066 aa17.77■□□□□ 0.44
CLCNKA-203ENST00000439316 A0A1W2PRG0 241 aa17.77■□□□□ 0.43
CLCNKA-203ENST00000439316 PSMD10O75832 226 aa17.77■□□□□ 0.43
CLCNKA-203ENST00000439316 DDNO94850 711 aaPredicted RBP17.77■□□□□ 0.43
CLCNKA-203ENST00000439316 PPP2R5CQ13362 524 aa17.77■□□□□ 0.43
CLCNKA-203ENST00000439316 COG2Q14746 738 aa17.77■□□□□ 0.43
CLCNKA-203ENST00000439316 DCAF12L1Q5VU92 463 aa17.77■□□□□ 0.43
CLCNKA-203ENST00000439316 FMNL3Q8IVF7 1028 aa17.77■□□□□ 0.43
CLCNKA-203ENST00000439316 UBLCP1Q8WVY7 318 aaPredicted RBP17.77■□□□□ 0.43
CLCNKA-203ENST00000439316 DYDC2Q96IM9 177 aa17.77■□□□□ 0.43
CLCNKA-203ENST00000439316 CELF4Q9BZC1 486 aaKnown RBP17.77■□□□□ 0.43
CLCNKA-203ENST00000439316 INTS2Q9H0H0 1204 aaKnown RBP17.77■□□□□ 0.43
CLCNKA-203ENST00000439316 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.77■□□□□ 0.43
CLCNKA-203ENST00000439316 PPP1R9AQ9ULJ8 1098 aa17.77■□□□□ 0.43
CLCNKA-203ENST00000439316 FSBPO95073 299 aa17.76■□□□□ 0.43
CLCNKA-203ENST00000439316 FGGP02679 453 aa17.76■□□□□ 0.43
CLCNKA-203ENST00000439316 CAP2P40123 477 aa17.76■□□□□ 0.43
CLCNKA-203ENST00000439316 PTENP60484 403 aa17.76■□□□□ 0.43
CLCNKA-203ENST00000439316 PLS1Q14651 629 aa17.76■□□□□ 0.43
CLCNKA-203ENST00000439316 PPP2R5AQ15172 486 aa17.76■□□□□ 0.43
CLCNKA-203ENST00000439316 CBWD6Q4V339 395 aa17.76■□□□□ 0.43
CLCNKA-203ENST00000439316 CBWD3Q5JTY5 395 aa17.76■□□□□ 0.43
CLCNKA-203ENST00000439316 CBWD5Q5RIA9 395 aa17.76■□□□□ 0.43
CLCNKA-203ENST00000439316 ANGEL2Q5VTE6 544 aaKnown RBP17.76■□□□□ 0.43
CLCNKA-203ENST00000439316 CNPY4Q8N129 248 aa17.76■□□□□ 0.43
CLCNKA-203ENST00000439316 OTUD6BQ8N6M0 293 aa17.76■□□□□ 0.43
CLCNKA-203ENST00000439316 C3orf20Q8ND61 904 aa17.76■□□□□ 0.43
CLCNKA-203ENST00000439316 ATP8B4Q8TF62 1192 aa17.76■□□□□ 0.43
CLCNKA-203ENST00000439316 CTNNBL1Q8WYA6 563 aaPredicted RBP17.76■□□□□ 0.43
CLCNKA-203ENST00000439316 SLC5A5Q92911 643 aa17.76■□□□□ 0.43
CLCNKA-203ENST00000439316 CENPHQ9H3R5 247 aa17.76■□□□□ 0.43
CLCNKA-203ENST00000439316 AGPAT3Q9NRZ7 376 aa17.76■□□□□ 0.43
CLCNKA-203ENST00000439316 UTP11Q9Y3A2 253 aaKnown RBP17.76■□□□□ 0.43
CLCNKA-203ENST00000439316 MUTP22033 750 aa17.75■□□□□ 0.43
CLCNKA-203ENST00000439316 ECE1P42892 770 aa17.75■□□□□ 0.43
CLCNKA-203ENST00000439316 FNTAP49354 379 aa17.75■□□□□ 0.43
CLCNKA-203ENST00000439316 SPDYCQ5MJ68 293 aa17.75■□□□□ 0.43
CLCNKA-203ENST00000439316 LRCH2Q5VUJ6 765 aa17.75■□□□□ 0.43
CLCNKA-203ENST00000439316 HS2ST1Q7LGA3 356 aa17.75■□□□□ 0.43
CLCNKA-203ENST00000439316 ZNF720Q7Z2F6 126 aa17.75■□□□□ 0.43
CLCNKA-203ENST00000439316 TPH2Q8IWU9 490 aa17.75■□□□□ 0.43
CLCNKA-203ENST00000439316 TXLNGYQ9BZA5 131 aa17.75■□□□□ 0.43
CLCNKA-203ENST00000439316 CARD9Q9H257 536 aa17.75■□□□□ 0.43
CLCNKA-203ENST00000439316 APEX2Q9UBZ4 518 aa17.75■□□□□ 0.43
CLCNKA-203ENST00000439316 PRR12Q9ULL5 1215 aa17.75■□□□□ 0.43
CLCNKA-203ENST00000439316 E7EVH7 732 aa17.75■□□□□ 0.43
CLCNKA-203ENST00000439316 PPFIA2O75334 1257 aa17.75■□□□□ 0.43
CLCNKA-203ENST00000439316 CCDC172P0C7W6 258 aa17.75■□□□□ 0.43
CLCNKA-203ENST00000439316 KIF22Q14807 665 aa17.75■□□□□ 0.43
CLCNKA-203ENST00000439316 PPP2R5EQ16537 467 aa17.75■□□□□ 0.43
CLCNKA-203ENST00000439316 C9orf131Q5VYM1 1079 aa17.75■□□□□ 0.43
CLCNKA-203ENST00000439316 STXBP4Q6ZWJ1 553 aa17.75■□□□□ 0.43
CLCNKA-203ENST00000439316 ACER1Q8TDN7 264 aa17.75■□□□□ 0.43
CLCNKA-203ENST00000439316 ARHGEF26Q96DR7 871 aa17.75■□□□□ 0.43
CLCNKA-203ENST00000439316 RAB17Q9H0T7 212 aa17.75■□□□□ 0.43
CLCNKA-203ENST00000439316 SYNPO2Q9UMS6 1093 aa17.75■□□□□ 0.43
CLCNKA-203ENST00000439316 PHF20L1A8MW92 1017 aa17.74■□□□□ 0.43
CLCNKA-203ENST00000439316 PAEPP09466 180 aa17.74■□□□□ 0.43
CLCNKA-203ENST00000439316 TRIM49P0CI25 452 aa17.74■□□□□ 0.43
CLCNKA-203ENST00000439316 TRIM49CP0CI26 452 aa17.74■□□□□ 0.43
CLCNKA-203ENST00000439316 HIRAP54198 1017 aaPredicted RBP17.74■□□□□ 0.43
CLCNKA-203ENST00000439316 PPP2R2AP63151 447 aa17.74■□□□□ 0.43
CLCNKA-203ENST00000439316 MYL7Q01449 175 aa17.74■□□□□ 0.43
CLCNKA-203ENST00000439316 NBPF12Q5TAG4 269 aaPredicted RBP17.74■□□□□ 0.43
CLCNKA-203ENST00000439316 SLC30A10Q6XR72 485 aa17.74■□□□□ 0.43
CLCNKA-203ENST00000439316 KSR1Q8IVT5 923 aa17.74■□□□□ 0.43
CLCNKA-203ENST00000439316 PRPF38AQ8NAV1 312 aaKnown RBP17.74■□□□□ 0.43
CLCNKA-203ENST00000439316 TRIM51Q9BSJ1 452 aa17.74■□□□□ 0.43
CLCNKA-203ENST00000439316 DPH5Q9H2P9 285 aa17.74■□□□□ 0.43
CLCNKA-203ENST00000439316 ARHGEF10LQ9HCE6 1279 aa17.74■□□□□ 0.43
CLCNKA-203ENST00000439316 KCND2Q9NZV8 630 aa17.74■□□□□ 0.43
CLCNKA-203ENST00000439316 ODF2LQ9ULJ1 636 aa17.74■□□□□ 0.43
CLCNKA-203ENST00000439316 FRMD4BQ9Y2L6 1034 aa17.74■□□□□ 0.43
CLCNKA-203ENST00000439316 NR2E1Q9Y466 385 aa17.74■□□□□ 0.43
CLCNKA-203ENST00000439316 ZBTB39O15060 712 aa17.73■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms