RNA–Protein interactions for RNA: ENST00000439029.5

SMPD4-208, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 4

Gene SMPD4, Length 566 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-208ENST00000439029 PRR23CQ6ZRP0 262 aa11.08□□□□□ -0.64
SMPD4-208ENST00000439029 FAM43BQ6ZT52 329 aaPredicted RBP11.08□□□□□ -0.64
SMPD4-208ENST00000439029 PALB2Q86YC2 1186 aa11.08□□□□□ -0.64
SMPD4-208ENST00000439029 GLYCTKQ8IVS8 523 aa11.08□□□□□ -0.64
SMPD4-208ENST00000439029 RRP36Q96EU6 259 aaKnown RBP11.08□□□□□ -0.64
SMPD4-208ENST00000439029 MXRA8Q9BRK3 442 aa11.08□□□□□ -0.64
SMPD4-208ENST00000439029 DDX23Q9BUQ8 820 aaKnown RBP11.08□□□□□ -0.64
SMPD4-208ENST00000439029 AGO4Q9HCK5 861 aaKnown RBP11.08□□□□□ -0.64
SMPD4-208ENST00000439029 ZNF302Q9NR11 478 aa11.08□□□□□ -0.64
SMPD4-208ENST00000439029 COL1A2P08123 1366 aa11.07□□□□□ -0.64
SMPD4-208ENST00000439029 SPDYE3A6NKU9 549 aa11.07□□□□□ -0.64
SMPD4-208ENST00000439029 IFIT3O14879 490 aaKnown RBP11.07□□□□□ -0.64
SMPD4-208ENST00000439029 DDHD2O94830 711 aa11.07□□□□□ -0.64
SMPD4-208ENST00000439029 ATG7O95352 703 aa11.07□□□□□ -0.64
SMPD4-208ENST00000439029 GLUD1P00367 558 aa11.07□□□□□ -0.64
SMPD4-208ENST00000439029 EIF4BP23588 611 aaKnown RBP11.07□□□□□ -0.64
SMPD4-208ENST00000439029 KIF5BP33176 963 aa11.07□□□□□ -0.64
SMPD4-208ENST00000439029 PDE1AP54750 535 aa11.07□□□□□ -0.64
SMPD4-208ENST00000439029 SRSF5Q13243 272 aaKnown RBP11.07□□□□□ -0.64
SMPD4-208ENST00000439029 NOMO2Q5JPE7 1267 aa11.07□□□□□ -0.64
SMPD4-208ENST00000439029 ZBTB41Q5SVQ8 909 aa11.07□□□□□ -0.64
SMPD4-208ENST00000439029 ANKRD45Q5TZF3 282 aa11.07□□□□□ -0.64
SMPD4-208ENST00000439029 IL31Q6EBC2 164 aa11.07□□□□□ -0.64
SMPD4-208ENST00000439029 LAIR1Q6GTX8 287 aa11.07□□□□□ -0.64
SMPD4-208ENST00000439029 EFCAB12Q6NXP0 572 aa11.07□□□□□ -0.64
SMPD4-208ENST00000439029 GLB1LQ6UWU2 654 aa11.07□□□□□ -0.64
SMPD4-208ENST00000439029 CWC27Q6UX04 472 aaKnown RBP11.07□□□□□ -0.64
SMPD4-208ENST00000439029 ABHD15Q6UXT9 468 aa11.07□□□□□ -0.64
SMPD4-208ENST00000439029 TPRG1Q6ZUI0 275 aa11.07□□□□□ -0.64
SMPD4-208ENST00000439029 CMTR1Q8N1G2 835 aaKnown RBP11.07□□□□□ -0.64
SMPD4-208ENST00000439029 PHKBQ93100 1093 aa11.07□□□□□ -0.64
SMPD4-208ENST00000439029 BORCS6Q96GS4 357 aa11.07□□□□□ -0.64
SMPD4-208ENST00000439029 KXD1Q9BQD3 176 aa11.07□□□□□ -0.64
SMPD4-208ENST00000439029 MYL10Q9BUA6 226 aa11.07□□□□□ -0.64
SMPD4-208ENST00000439029 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.07□□□□□ -0.643e-8■□□□□ 9.5
SMPD4-208ENST00000439029 PCDHB15Q9Y5E8 787 aa11.07□□□□□ -0.64
SMPD4-208ENST00000439029 NFASCO94856 1347 aa11.07□□□□□ -0.64
SMPD4-208ENST00000439029 FRYQ5TBA9 3013 aa11.06□□□□□ -0.64
SMPD4-208ENST00000439029 IGKV6D-21A0A0A0MT36 114 aa11.06□□□□□ -0.64
SMPD4-208ENST00000439029 MAFGO15525 162 aa11.06□□□□□ -0.64
SMPD4-208ENST00000439029 OFD1O75665 1012 aa11.06□□□□□ -0.64
SMPD4-208ENST00000439029 URODP06132 367 aa11.06□□□□□ -0.64
SMPD4-208ENST00000439029 RETP07949 1114 aa11.06□□□□□ -0.64
SMPD4-208ENST00000439029 DARSP14868 501 aaKnown RBP11.06□□□□□ -0.64
SMPD4-208ENST00000439029 SDSP20132 328 aa11.06□□□□□ -0.64
SMPD4-208ENST00000439029 FSHRP23945 695 aa11.06□□□□□ -0.64
SMPD4-208ENST00000439029 PHKA2P46019 1235 aa11.06□□□□□ -0.64
SMPD4-208ENST00000439029 SLC26A2P50443 739 aa11.06□□□□□ -0.64
SMPD4-208ENST00000439029 AFF1P51825 1210 aaKnown RBP11.06□□□□□ -0.64
SMPD4-208ENST00000439029 MFAP1P55081 439 aaKnown RBP11.06□□□□□ -0.64
SMPD4-208ENST00000439029 PRKCQQ04759 706 aa11.06□□□□□ -0.64
SMPD4-208ENST00000439029 TROAPQ12815 778 aa11.06□□□□□ -0.64
SMPD4-208ENST00000439029 B3GALT6Q96L58 329 aa11.06□□□□□ -0.64
SMPD4-208ENST00000439029 RPS6KC1Q96S38 1066 aa11.06□□□□□ -0.64
SMPD4-208ENST00000439029 MAP7D2Q96T17 732 aa11.06□□□□□ -0.64
SMPD4-208ENST00000439029 NT5C3AQ9H0P0 336 aa11.06□□□□□ -0.64
SMPD4-208ENST00000439029 CNNM2Q9H8M5 875 aa11.06□□□□□ -0.64
SMPD4-208ENST00000439029 PRMT8Q9NR22 394 aaPredicted RBP11.06□□□□□ -0.64
SMPD4-208ENST00000439029 FAM217BQ9NTX9 383 aaPredicted RBP11.06□□□□□ -0.64
SMPD4-208ENST00000439029 SEC63Q9UGP8 760 aaKnown RBP11.06□□□□□ -0.64
SMPD4-208ENST00000439029 PRG3Q9Y2Y8 225 aaPredicted RBP11.06□□□□□ -0.64
SMPD4-208ENST00000439029 GAS2O43903 313 aaKnown RBP11.05□□□□□ -0.64
SMPD4-208ENST00000439029 PLEKHA8P1O95397 391 aa11.05□□□□□ -0.64
SMPD4-208ENST00000439029 ADH1AP07327 375 aa11.05□□□□□ -0.64
SMPD4-208ENST00000439029 SPINK2P20155 84 aa11.05□□□□□ -0.64
SMPD4-208ENST00000439029 NT5C2P49902 561 aa11.05□□□□□ -0.64
SMPD4-208ENST00000439029 GPC3P51654 580 aa11.05□□□□□ -0.64
SMPD4-208ENST00000439029 SHC2P98077 582 aa11.05□□□□□ -0.64
SMPD4-208ENST00000439029 SIM2Q14190 667 aaPredicted RBP11.05□□□□□ -0.64
SMPD4-208ENST00000439029 CCDC6Q16204 474 aa11.05□□□□□ -0.64
SMPD4-208ENST00000439029 TWF2Q6IBS0 349 aaKnown RBP11.05□□□□□ -0.64
SMPD4-208ENST00000439029 MIS18BP1Q6P0N0 1132 aa11.05□□□□□ -0.64
SMPD4-208ENST00000439029 UNQ6494/PRO21346Q6UXR6 183 aa11.05□□□□□ -0.64
SMPD4-208ENST00000439029 GRASPQ7Z6J2 395 aaPredicted RBP11.05□□□□□ -0.64
SMPD4-208ENST00000439029 NLRP7Q8WX94 980 aa11.05□□□□□ -0.64
SMPD4-208ENST00000439029 CLDN23Q96B33 292 aa11.05□□□□□ -0.64
SMPD4-208ENST00000439029 DACT1Q9NYF0 836 aa11.05□□□□□ -0.64
SMPD4-208ENST00000439029 ZBTB47Q9UFB7 747 aaPredicted RBP11.05□□□□□ -0.64
SMPD4-208ENST00000439029 NDRG2Q9UN36 371 aaKnown RBP11.05□□□□□ -0.64
SMPD4-208ENST00000439029 FAN1Q9Y2M0 1017 aa11.05□□□□□ -0.64
SMPD4-208ENST00000439029 F5P12259 2224 aa11.05□□□□□ -0.64
SMPD4-208ENST00000439029 SOBPA7XYQ1 873 aa11.04□□□□□ -0.64
SMPD4-208ENST00000439029 F8W810 466 aa11.04□□□□□ -0.64
SMPD4-208ENST00000439029 NRP1O14786 923 aa11.04□□□□□ -0.64
SMPD4-208ENST00000439029 TGM5O43548 720 aa11.04□□□□□ -0.64
SMPD4-208ENST00000439029 POMCP01189 267 aa11.04□□□□□ -0.64
SMPD4-208ENST00000439029 SOD2P04179 222 aa11.04□□□□□ -0.64
SMPD4-208ENST00000439029 TDGF1P13385 188 aa11.04□□□□□ -0.64
SMPD4-208ENST00000439029 RPL17P18621 184 aaKnown RBP11.04□□□□□ -0.64
SMPD4-208ENST00000439029 FZD5Q13467 585 aa11.04□□□□□ -0.64
SMPD4-208ENST00000439029 SF3A2Q15428 464 aaKnown RBP11.04□□□□□ -0.64
SMPD4-208ENST00000439029 CSRP2Q16527 193 aa11.04□□□□□ -0.64
SMPD4-208ENST00000439029 CYP26C1Q6V0L0 522 aa11.04□□□□□ -0.64
SMPD4-208ENST00000439029 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.04□□□□□ -0.64
SMPD4-208ENST00000439029 OSBPL6Q9BZF3 934 aa11.04□□□□□ -0.64
SMPD4-208ENST00000439029 PRKD2Q9BZL6 878 aa11.04□□□□□ -0.64
SMPD4-208ENST00000439029 RXFP3Q9NSD7 469 aa11.04□□□□□ -0.64
SMPD4-208ENST00000439029 MARCH5Q9NX47 278 aa11.04□□□□□ -0.64
SMPD4-208ENST00000439029 CDH7Q9ULB5 785 aa11.04□□□□□ -0.64
SMPD4-208ENST00000439029 ERICH2A1L162 156 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms