RNA–Protein interactions for RNA: ENST00000438801.1

HMGB1P18-201, Transcript of high mobility group box 1 pseudogene 18, humanhuman

BASIC

Gene HMGB1P18, Length 619 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P18-201ENST00000438801 RPL10LQ96L21 214 aaKnown RBP4.4□□□□□ -1.71
HMGB1P18-201ENST00000438801 NCOA5Q9HCD5 579 aaKnown RBP4.4□□□□□ -1.71
HMGB1P18-201ENST00000438801 SLC2A4RGQ9NR83 387 aa4.4□□□□□ -1.71
HMGB1P18-201ENST00000438801 REXO2Q9Y3B8 237 aaKnown RBP4.4□□□□□ -1.71
HMGB1P18-201ENST00000438801 RBM8AQ9Y5S9 174 aaKnown RBP4.4□□□□□ -1.71
HMGB1P18-201ENST00000438801 PTCH2Q9Y6C5 1203 aa4.4□□□□□ -1.71
HMGB1P18-201ENST00000438801 ARAP3Q8WWN8 1544 aa4.4□□□□□ -1.71
HMGB1P18-201ENST00000438801 WDR90Q96KV7 1748 aa4.39□□□□□ -1.71
HMGB1P18-201ENST00000438801 C2orf78A6NCI8 922 aa4.39□□□□□ -1.71
HMGB1P18-201ENST00000438801 BPIFB4P59827 614 aa4.39□□□□□ -1.71
HMGB1P18-201ENST00000438801 SLFN12LQ6IEE8 588 aa4.39□□□□□ -1.71
HMGB1P18-201ENST00000438801 ZCCHC8Q6NZY4 707 aaKnown RBP4.39□□□□□ -1.71
HMGB1P18-201ENST00000438801 GAREM2Q75VX8 874 aa4.39□□□□□ -1.71
HMGB1P18-201ENST00000438801 LDLRAD3Q86YD5 345 aa4.39□□□□□ -1.71
HMGB1P18-201ENST00000438801 NKD2Q969F2 451 aaPredicted RBP4.39□□□□□ -1.71
HMGB1P18-201ENST00000438801 MIEF2Q96C03 454 aa4.39□□□□□ -1.71
HMGB1P18-201ENST00000438801 ABHD8Q96I13 439 aa4.39□□□□□ -1.71
HMGB1P18-201ENST00000438801 GPHA2Q96T91 129 aa4.39□□□□□ -1.71
HMGB1P18-201ENST00000438801 ACSS2Q9NR19 701 aa4.39□□□□□ -1.71
HMGB1P18-201ENST00000438801 SAMD15Q9P1V8 674 aa4.39□□□□□ -1.71
HMGB1P18-201ENST00000438801 MAGI3Q5TCQ9 1506 aa4.39□□□□□ -1.71
HMGB1P18-201ENST00000438801 WDR97A6NE52 1622 aa4.39□□□□□ -1.71
HMGB1P18-201ENST00000438801 SUPT6HQ7KZ85 1726 aaKnown RBP4.38□□□□□ -1.71
HMGB1P18-201ENST00000438801 RAD54L2Q9Y4B4 1467 aa4.38□□□□□ -1.71
HMGB1P18-201ENST00000438801 ARHGEF40Q8TER5 1519 aa4.38□□□□□ -1.71
HMGB1P18-201ENST00000438801 ABCC2Q92887 1545 aa4.38□□□□□ -1.71
HMGB1P18-201ENST00000438801 KDM5BQ9UGL1 1544 aa4.38□□□□□ -1.71
HMGB1P18-201ENST00000438801 XIRP1Q702N8 1843 aaKnown RBP4.38□□□□□ -1.71
HMGB1P18-201ENST00000438801 UBA6A0AVT1 1052 aaPredicted RBP4.38□□□□□ -1.71
HMGB1P18-201ENST00000438801 UBE2QL1A1L167 161 aa4.38□□□□□ -1.71
HMGB1P18-201ENST00000438801 GOLGA8BA8MQT2 603 aa4.38□□□□□ -1.71
HMGB1P18-201ENST00000438801 B4E1Z4 1266 aa4.38□□□□□ -1.71
HMGB1P18-201ENST00000438801 DVL2O14641 736 aa4.38□□□□□ -1.71
HMGB1P18-201ENST00000438801 PLD2O14939 933 aa4.38□□□□□ -1.71
HMGB1P18-201ENST00000438801 GLRX3O76003 335 aaKnown RBP4.38□□□□□ -1.71
HMGB1P18-201ENST00000438801 PEX11BO96011 259 aa4.38□□□□□ -1.71
HMGB1P18-201ENST00000438801 IGFALSP35858 605 aa4.38□□□□□ -1.71
HMGB1P18-201ENST00000438801 SCNN1GP51170 649 aa4.38□□□□□ -1.71
HMGB1P18-201ENST00000438801 ADAM8P78325 824 aa4.38□□□□□ -1.71
HMGB1P18-201ENST00000438801 TCIRG1Q13488 830 aa4.38□□□□□ -1.71
HMGB1P18-201ENST00000438801 CNGB1Q14028 1251 aaPredicted RBP4.38□□□□□ -1.71
HMGB1P18-201ENST00000438801 TTC38Q5R3I4 469 aa4.38□□□□□ -1.71
HMGB1P18-201ENST00000438801 SOGA3Q5TF21 947 aa4.38□□□□□ -1.71
HMGB1P18-201ENST00000438801 FAM111BQ6SJ93 734 aa4.38□□□□□ -1.71
HMGB1P18-201ENST00000438801 Q6ZRM9 215 aa4.38□□□□□ -1.71
HMGB1P18-201ENST00000438801 ZNF627Q7L945 461 aa4.38□□□□□ -1.71
HMGB1P18-201ENST00000438801 CHST14Q8NCH0 376 aa4.38□□□□□ -1.71
HMGB1P18-201ENST00000438801 PMFBP1Q8TBY8 1022 aa4.38□□□□□ -1.71
HMGB1P18-201ENST00000438801 PCIF1Q9H4Z3 704 aa4.38□□□□□ -1.71
HMGB1P18-201ENST00000438801 KCMF1Q9P0J7 381 aa4.38□□□□□ -1.71
HMGB1P18-201ENST00000438801 KDM5CP41229 1560 aa4.38□□□□□ -1.71
HMGB1P18-201ENST00000438801 PBRM1Q86U86 1689 aa4.38□□□□□ -1.71
HMGB1P18-201ENST00000438801 BAHCC1Q9P281 2608 aa4.38□□□□□ -1.71
HMGB1P18-201ENST00000438801 NUP160Q12769 1436 aa4.38□□□□□ -1.71
HMGB1P18-201ENST00000438801 CD109Q6YHK3 1445 aa4.38□□□□□ -1.71
HMGB1P18-201ENST00000438801 ABCC8Q09428 1581 aa4.37□□□□□ -1.71
HMGB1P18-201ENST00000438801 MROH2BQ7Z745 1585 aa4.37□□□□□ -1.71
HMGB1P18-201ENST00000438801 PTPDC1A2A3K4 754 aa4.37□□□□□ -1.71
HMGB1P18-201ENST00000438801 H7C1D1 291 aa4.37□□□□□ -1.71
HMGB1P18-201ENST00000438801 CYP17A1P05093 508 aa4.37□□□□□ -1.71
HMGB1P18-201ENST00000438801 MAN2A2P49641 1150 aa4.37□□□□□ -1.71
HMGB1P18-201ENST00000438801 SLC25A3Q00325 362 aa4.37□□□□□ -1.71
HMGB1P18-201ENST00000438801 ELAVL1Q15717 326 aaKnown RBP4.37□□□□□ -1.71
HMGB1P18-201ENST00000438801 GAGE13Q4V321 117 aa4.37□□□□□ -1.71
HMGB1P18-201ENST00000438801 PRAMEF9Q5VWM5 478 aa4.37□□□□□ -1.71
HMGB1P18-201ENST00000438801 ZNF662Q6ZS27 426 aa4.37□□□□□ -1.71
HMGB1P18-201ENST00000438801 MRGPRGQ86SM5 289 aa4.37□□□□□ -1.71
HMGB1P18-201ENST00000438801 GSPT2Q8IYD1 628 aaKnown RBP4.37□□□□□ -1.71
HMGB1P18-201ENST00000438801 LILRB2Q8N423 598 aa4.37□□□□□ -1.71
HMGB1P18-201ENST00000438801 PLA2G15Q8NCC3 412 aa4.37□□□□□ -1.71
HMGB1P18-201ENST00000438801 DYDC2Q96IM9 177 aa4.37□□□□□ -1.71
HMGB1P18-201ENST00000438801 C16orf92Q96LL3 132 aa4.37□□□□□ -1.71
HMGB1P18-201ENST00000438801 CLUHP3Q96NS8 147 aa4.37□□□□□ -1.71
HMGB1P18-201ENST00000438801 TCF25Q9BQ70 676 aa4.37□□□□□ -1.71
HMGB1P18-201ENST00000438801 KRTAP9-8Q9BYQ0 159 aa4.37□□□□□ -1.71
HMGB1P18-201ENST00000438801 IL23AQ9NPF7 189 aa4.37□□□□□ -1.71
HMGB1P18-201ENST00000438801 SPATA31A6Q5VVP1 1343 aa4.37□□□□□ -1.71
HMGB1P18-201ENST00000438801 PHLPP1O60346 1717 aa4.37□□□□□ -1.71
HMGB1P18-201ENST00000438801 SCAF11Q99590 1463 aaKnown RBP4.37□□□□□ -1.71
HMGB1P18-201ENST00000438801 CDK13Q14004 1512 aaKnown RBP4.36□□□□□ -1.71
HMGB1P18-201ENST00000438801 DNMBPQ6XZF7 1577 aa4.36□□□□□ -1.71
HMGB1P18-201ENST00000438801 PEG3Q9GZU2 1588 aa4.36□□□□□ -1.71
HMGB1P18-201ENST00000438801 TRAF5O00463 557 aa4.36□□□□□ -1.71
HMGB1P18-201ENST00000438801 ASLP04424 464 aa4.36□□□□□ -1.71
HMGB1P18-201ENST00000438801 VSIG10L2P0DP72 767 aa4.36□□□□□ -1.71
HMGB1P18-201ENST00000438801 ZNF174Q15697 407 aa4.36□□□□□ -1.71
HMGB1P18-201ENST00000438801 FNDC3BQ53EP0 1204 aaKnown RBP4.36□□□□□ -1.71
HMGB1P18-201ENST00000438801 KRT40Q6A162 431 aa4.36□□□□□ -1.71
HMGB1P18-201ENST00000438801 BMP8AQ7Z5Y6 402 aa4.36□□□□□ -1.71
HMGB1P18-201ENST00000438801 CLEC14AQ86T13 490 aa4.36□□□□□ -1.71
HMGB1P18-201ENST00000438801 NME9Q86XW9 330 aa4.36□□□□□ -1.71
HMGB1P18-201ENST00000438801 ULK2Q8IYT8 1036 aa4.36□□□□□ -1.71
HMGB1P18-201ENST00000438801 KIAA1958Q8N8K9 716 aa4.36□□□□□ -1.71
HMGB1P18-201ENST00000438801 WDR92Q96MX6 357 aa4.36□□□□□ -1.71
HMGB1P18-201ENST00000438801 TUBGCP5Q96RT8 1024 aa4.36□□□□□ -1.71
HMGB1P18-201ENST00000438801 PRRX2Q99811 253 aa4.36□□□□□ -1.71
HMGB1P18-201ENST00000438801 GPR87Q9BY21 358 aa4.36□□□□□ -1.71
HMGB1P18-201ENST00000438801 CABP5Q9NP86 173 aa4.36□□□□□ -1.71
HMGB1P18-201ENST00000438801 POLR3BQ9NW08 1133 aaPredicted RBP4.36□□□□□ -1.71
HMGB1P18-201ENST00000438801 DNAI1Q9UI46 699 aa4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms