RNA–Protein interactions for RNA: ENST00000438700.7

PTCHD3-201, Transcript of patched domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCHD3, Length 2,529 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3-201ENST00000438700 MS4A14Q96JA4 679 aa15.12■□□□□ 0.01
PTCHD3-201ENST00000438700 MED4Q9NPJ6 270 aa15.12■□□□□ 0.01
PTCHD3-201ENST00000438700 AJAP1Q9UKB5 411 aaPredicted RBP15.12■□□□□ 0.01
PTCHD3-201ENST00000438700 GAP43P17677 238 aa15.11■□□□□ 0.01
PTCHD3-201ENST00000438700 TCP1P17987 556 aaKnown RBP15.11■□□□□ 0.01
PTCHD3-201ENST00000438700 QARSP47897 775 aaKnown RBP15.11■□□□□ 0.01
PTCHD3-201ENST00000438700 KRT76Q01546 638 aa15.11■□□□□ 0.01
PTCHD3-201ENST00000438700 UGCGQ16739 394 aa15.11■□□□□ 0.01
PTCHD3-201ENST00000438700 TTC19Q6DKK2 380 aaPredicted RBP15.11■□□□□ 0.01
PTCHD3-201ENST00000438700 DPY19L2P1Q6NXN4 242 aa15.11■□□□□ 0.01
PTCHD3-201ENST00000438700 MAEAQ7L5Y9 396 aa15.11■□□□□ 0.01
PTCHD3-201ENST00000438700 MAF1Q9H063 256 aa15.11■□□□□ 0.01
PTCHD3-201ENST00000438700 FBXO40Q9UH90 709 aa15.11■□□□□ 0.01
PTCHD3-201ENST00000438700 TARSL2A2RTX5 802 aaKnown RBP15.11■□□□□ 0.01
PTCHD3-201ENST00000438700 WDR64B1ANS9 1081 aa15.11■□□□□ 0.01
PTCHD3-201ENST00000438700 PPFIA4O75335 1185 aa15.11■□□□□ 0.01
PTCHD3-201ENST00000438700 CNMDO75829 334 aa15.11■□□□□ 0.01
PTCHD3-201ENST00000438700 JAK3P52333 1124 aa15.11■□□□□ 0.01
PTCHD3-201ENST00000438700 SLC7A5Q01650 507 aa15.11■□□□□ 0.01
PTCHD3-201ENST00000438700 TRMT1LQ7Z2T5 733 aaKnown RBP15.11■□□□□ 0.01
PTCHD3-201ENST00000438700 ZNF571Q7Z3V5 609 aaPredicted RBP15.11■□□□□ 0.01
PTCHD3-201ENST00000438700 FAM178BQ8IXR5 827 aa15.11■□□□□ 0.01
PTCHD3-201ENST00000438700 LRRC1Q9BTT6 524 aa15.11■□□□□ 0.01
PTCHD3-201ENST00000438700 LUC7LQ9NQ29 371 aaKnown RBP15.11■□□□□ 0.01
PTCHD3-201ENST00000438700 WDR81Q562E7 1941 aa15.11■□□□□ 0.01
PTCHD3-201ENST00000438700 PFASO15067 1338 aa15.11■□□□□ 0.01
PTCHD3-201ENST00000438700 KCNA2P16389 499 aa15.1■□□□□ 0.01
PTCHD3-201ENST00000438700 NAB2Q15742 525 aa15.1■□□□□ 0.01
PTCHD3-201ENST00000438700 ODR4Q5SWX8 454 aa15.1■□□□□ 0.01
PTCHD3-201ENST00000438700 FASTKD5Q7L8L6 764 aaKnown RBP15.1■□□□□ 0.01
PTCHD3-201ENST00000438700 IRF2BP2Q7Z5L9 587 aa15.1■□□□□ 0.01
PTCHD3-201ENST00000438700 RNF10Q8N5U6 811 aaKnown RBP15.1■□□□□ 0.01
PTCHD3-201ENST00000438700 MOV10L1Q9BXT6 1211 aaKnown RBP15.1■□□□□ 0.01
PTCHD3-201ENST00000438700 R3HDMLQ9H3Y0 253 aa15.1■□□□□ 0.01
PTCHD3-201ENST00000438700 TXNRD2Q9NNW7 524 aa15.1■□□□□ 0.01
PTCHD3-201ENST00000438700 PLCB1Q9NQ66 1216 aa15.1■□□□□ 0.01
PTCHD3-201ENST00000438700 KCND2Q9NZV8 630 aa15.1■□□□□ 0.01
PTCHD3-201ENST00000438700 MAFGO15525 162 aa15.1■□□□□ 0.01
PTCHD3-201ENST00000438700 PRLRP16471 622 aa15.1■□□□□ 0.01
PTCHD3-201ENST00000438700 SFNP31947 248 aa15.1■□□□□ 0.01
PTCHD3-201ENST00000438700 AARSP49588 968 aaKnown RBP eCLIP15.1■□□□□ 0.01
PTCHD3-201ENST00000438700 CYP2J2P51589 502 aa15.1■□□□□ 0.01
PTCHD3-201ENST00000438700 FSTL1Q12841 308 aa15.1■□□□□ 0.01
PTCHD3-201ENST00000438700 MAP9Q49MG5 647 aa15.1■□□□□ 0.01
PTCHD3-201ENST00000438700 GBP6Q6ZN66 633 aa15.1■□□□□ 0.01
PTCHD3-201ENST00000438700 FAM186BQ8IYM0 893 aa15.1■□□□□ 0.01
PTCHD3-201ENST00000438700 DNERQ8NFT8 737 aa15.1■□□□□ 0.01
PTCHD3-201ENST00000438700 SLC10A4Q96EP9 437 aa15.1■□□□□ 0.01
PTCHD3-201ENST00000438700 METTL14Q9HCE5 456 aaKnown RBP15.1■□□□□ 0.01
PTCHD3-201ENST00000438700 DMGDHQ9UI17 866 aaKnown RBP15.1■□□□□ 0.01
PTCHD3-201ENST00000438700 FAM170AA1A519 330 aa15.09■□□□□ 0.01
PTCHD3-201ENST00000438700 SLC16A3O15427 465 aaKnown RBP15.09■□□□□ 0.01
PTCHD3-201ENST00000438700 STAM2O75886 525 aa15.09■□□□□ 0.01
PTCHD3-201ENST00000438700 MCM3P25205 808 aa15.09■□□□□ 0.01
PTCHD3-201ENST00000438700 PTPROQ16827 1216 aa15.09■□□□□ 0.01
PTCHD3-201ENST00000438700 GNPTABQ3T906 1256 aa15.09■□□□□ 0.01
PTCHD3-201ENST00000438700 GPAT2Q6NUI2 795 aa15.09■□□□□ 0.01
PTCHD3-201ENST00000438700 PADI6Q6TGC4 694 aa15.09■□□□□ 0.01
PTCHD3-201ENST00000438700 MICALL1Q8N3F8 863 aa15.09■□□□□ 0.01
PTCHD3-201ENST00000438700 FIZ1Q96SL8 496 aa15.09■□□□□ 0.01
PTCHD3-201ENST00000438700 IWS1Q96ST2 819 aa15.09■□□□□ 0.01
PTCHD3-201ENST00000438700 SH2D3AQ9BRG2 576 aa15.09■□□□□ 0.01
PTCHD3-201ENST00000438700 GOLPH3Q9H4A6 298 aa15.09■□□□□ 0.01
PTCHD3-201ENST00000438700 TMEM150BA6NC51 233 aa15.09■□□□□ 0.01
PTCHD3-201ENST00000438700 EIF3DO15371 548 aaKnown RBP eCLIP15.09■□□□□ 0.01
PTCHD3-201ENST00000438700 LYPLA2O95372 231 aa15.09■□□□□ 0.01
PTCHD3-201ENST00000438700 CCT5P48643 541 aa15.09■□□□□ 0.01
PTCHD3-201ENST00000438700 SNAPC2Q13487 334 aa15.09■□□□□ 0.01
PTCHD3-201ENST00000438700 CCDC70Q6NSX1 233 aa15.09■□□□□ 0.01
PTCHD3-201ENST00000438700 ZNF746Q6NUN9 644 aaPredicted RBP15.09■□□□□ 0.01
PTCHD3-201ENST00000438700 CDHR1Q96JP9 859 aa15.09■□□□□ 0.01
PTCHD3-201ENST00000438700 SELENOOQ9BVL4 669 aa15.09■□□□□ 0.01
PTCHD3-201ENST00000438700 SIX2Q9NPC8 291 aa15.09■□□□□ 0.01
PTCHD3-201ENST00000438700 RBM12Q9NTZ6 932 aaKnown RBP15.09■□□□□ 0.01
PTCHD3-201ENST00000438700 DBR1Q9UK59 544 aaKnown RBP15.09■□□□□ 0.01
PTCHD3-201ENST00000438700 ODF2LQ9ULJ1 636 aa15.09■□□□□ 0.01
PTCHD3-201ENST00000438700 SORBS3O60504 671 aa15.08■□□□□ 0.01
PTCHD3-201ENST00000438700 HIP1RO75146 1068 aa15.08■□□□□ 0.01
PTCHD3-201ENST00000438700 OSBPP22059 807 aa15.08■□□□□ 0.01
PTCHD3-201ENST00000438700 GUCY2CP25092 1073 aa15.08■□□□□ 0.01
PTCHD3-201ENST00000438700 YWHABP31946 246 aaKnown RBP15.08■□□□□ 0.01
PTCHD3-201ENST00000438700 PAFAH1B1P43034 410 aa15.08■□□□□ 0.01
PTCHD3-201ENST00000438700 RARRES1P49788 294 aa15.08■□□□□ 0.01
PTCHD3-201ENST00000438700 ALDH5A1P51649 535 aaPredicted RBP15.08■□□□□ 0.01
PTCHD3-201ENST00000438700 ZNF131P52739 623 aa15.08■□□□□ 0.01
PTCHD3-201ENST00000438700 RNASE9P60153 205 aaKnown RBP15.08■□□□□ 0.01
PTCHD3-201ENST00000438700 PSMC5P62195 406 aa15.08■□□□□ 0.01
PTCHD3-201ENST00000438700 SP4Q02446 784 aa15.08■□□□□ 0.01
PTCHD3-201ENST00000438700 STXBP2Q15833 593 aa15.08■□□□□ 0.01
PTCHD3-201ENST00000438700 ZNF720Q7Z2F6 126 aa15.08■□□□□ 0.01
PTCHD3-201ENST00000438700 MMGT1Q8N4V1 131 aa15.08■□□□□ 0.01
PTCHD3-201ENST00000438700 ACBD3Q9H3P7 528 aa15.08■□□□□ 0.01
PTCHD3-201ENST00000438700 RBPJLQ9UBG7 517 aa15.08■□□□□ 0.01
PTCHD3-201ENST00000438700 TELO2Q9Y4R8 837 aa15.08■□□□□ 0.01
PTCHD3-201ENST00000438700 SPATA31C2B4DYI2 1134 aa15.08■□□□□ 0
PTCHD3-201ENST00000438700 TRIM49P0CI25 452 aa15.08■□□□□ 0
PTCHD3-201ENST00000438700 TRIM49CP0CI26 452 aa15.08■□□□□ 0
PTCHD3-201ENST00000438700 PSMC2P35998 433 aaKnown RBP15.08■□□□□ 0
PTCHD3-201ENST00000438700 LIG3P49916 1009 aa15.08■□□□□ 0
PTCHD3-201ENST00000438700 DNAJC21Q5F1R6 531 aaKnown RBP15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms