RNA–Protein interactions for RNA: ENST00000438594.2

HMGB1P12-201, Transcript of high mobility group box 1 pseudogene 12, humanhuman

BASIC

Gene HMGB1P12, Length 598 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P12-201ENST00000438594 PFKPQ01813 784 aa4.25□□□□□ -1.73
HMGB1P12-201ENST00000438594 TRIM14Q14142 442 aa4.25□□□□□ -1.73
HMGB1P12-201ENST00000438594 FHL2Q14192 279 aa4.25□□□□□ -1.73
HMGB1P12-201ENST00000438594 KIF22Q14807 665 aa4.25□□□□□ -1.73
HMGB1P12-201ENST00000438594 ARHGAP29Q52LW3 1261 aa4.25□□□□□ -1.73
HMGB1P12-201ENST00000438594 ZC3H12BQ5HYM0 836 aaKnown RBP4.25□□□□□ -1.73
HMGB1P12-201ENST00000438594 PKN3Q6P5Z2 889 aa4.25□□□□□ -1.73
HMGB1P12-201ENST00000438594 C6orf15Q6UXA7 325 aaPredicted RBP4.25□□□□□ -1.73
HMGB1P12-201ENST00000438594 GALNT5Q7Z7M9 940 aa4.25□□□□□ -1.73
HMGB1P12-201ENST00000438594 TTC30AQ86WT1 665 aa4.25□□□□□ -1.73
HMGB1P12-201ENST00000438594 SLC41A1Q8IVJ1 513 aa4.25□□□□□ -1.73
HMGB1P12-201ENST00000438594 FAM178BQ8IXR5 827 aa4.25□□□□□ -1.73
HMGB1P12-201ENST00000438594 TAB3Q8N5C8 712 aaPredicted RBP4.25□□□□□ -1.73
HMGB1P12-201ENST00000438594 HVCN1Q96D96 273 aa4.25□□□□□ -1.73
HMGB1P12-201ENST00000438594 CLIP3Q96DZ5 547 aa4.25□□□□□ -1.73
HMGB1P12-201ENST00000438594 TNIP3Q96KP6 325 aa4.25□□□□□ -1.73
HMGB1P12-201ENST00000438594 DHRS4Q9BTZ2 278 aa4.25□□□□□ -1.73
HMGB1P12-201ENST00000438594 TMEM168Q9H0V1 697 aa4.25□□□□□ -1.73
HMGB1P12-201ENST00000438594 PRKRIP1Q9H875 184 aaPredicted RBP4.25□□□□□ -1.73
HMGB1P12-201ENST00000438594 MAN1C1Q9NR34 630 aa4.25□□□□□ -1.73
HMGB1P12-201ENST00000438594 CLEC1BQ9P126 229 aa4.25□□□□□ -1.73
HMGB1P12-201ENST00000438594 RCAN3Q9UKA8 241 aa4.25□□□□□ -1.73
HMGB1P12-201ENST00000438594 CROTQ9UKG9 612 aa4.25□□□□□ -1.73
HMGB1P12-201ENST00000438594 ZNF214Q9UL59 606 aaPredicted RBP4.25□□□□□ -1.73
HMGB1P12-201ENST00000438594 PNMA8BQ9ULN7 279 aaPredicted RBP4.25□□□□□ -1.73
HMGB1P12-201ENST00000438594 GPR52Q9Y2T5 361 aa4.25□□□□□ -1.73
HMGB1P12-201ENST00000438594 ZDHHC9Q9Y397 364 aa4.25□□□□□ -1.73
HMGB1P12-201ENST00000438594 AFG3L2Q9Y4W6 797 aa4.25□□□□□ -1.73
HMGB1P12-201ENST00000438594 MAGED1Q9Y5V3 778 aaPredicted RBP4.25□□□□□ -1.73
HMGB1P12-201ENST00000438594 hCG_1642624A0A1W2PR95 340 aa4.24□□□□□ -1.73
HMGB1P12-201ENST00000438594 C9orf118A6NHY6 69 aa4.24□□□□□ -1.73
HMGB1P12-201ENST00000438594 GOLGA6L6A8MZA4 724 aa4.24□□□□□ -1.73
HMGB1P12-201ENST00000438594 C22orf46C9J442 243 aa4.24□□□□□ -1.73
HMGB1P12-201ENST00000438594 ERC2O15083 957 aa4.24□□□□□ -1.73
HMGB1P12-201ENST00000438594 BRINP1O60477 761 aa4.24□□□□□ -1.73
HMGB1P12-201ENST00000438594 B4GALT4O60513 344 aa4.24□□□□□ -1.73
HMGB1P12-201ENST00000438594 TLR5O60602 858 aa4.24□□□□□ -1.73
HMGB1P12-201ENST00000438594 GFPT2O94808 682 aa4.24□□□□□ -1.73
HMGB1P12-201ENST00000438594 MBD4O95243 580 aa4.24□□□□□ -1.73
HMGB1P12-201ENST00000438594 ARIH2O95376 493 aa4.24□□□□□ -1.73
HMGB1P12-201ENST00000438594 IFIT1P09914 478 aaKnown RBP4.24□□□□□ -1.73
HMGB1P12-201ENST00000438594 PF4V1P10720 104 aa4.24□□□□□ -1.73
HMGB1P12-201ENST00000438594 ZNF131P52739 623 aa4.24□□□□□ -1.73
HMGB1P12-201ENST00000438594 PPP2CBP62714 309 aa4.24□□□□□ -1.73
HMGB1P12-201ENST00000438594 PPP2CAP67775 309 aa4.24□□□□□ -1.73
HMGB1P12-201ENST00000438594 NKX3-2P78367 333 aa4.24□□□□□ -1.73
HMGB1P12-201ENST00000438594 MPP1Q00013 466 aa4.24□□□□□ -1.73
HMGB1P12-201ENST00000438594 PRKG2Q13237 762 aa4.24□□□□□ -1.73
HMGB1P12-201ENST00000438594 PCBP1Q15365 356 aaKnown RBP eCLIP4.24□□□□□ -1.73
HMGB1P12-201ENST00000438594 DHCR24Q15392 516 aa4.24□□□□□ -1.73
HMGB1P12-201ENST00000438594 PTPN21Q16825 1174 aa4.24□□□□□ -1.73
HMGB1P12-201ENST00000438594 ABCB5Q2M3G0 1257 aa4.24□□□□□ -1.73
HMGB1P12-201ENST00000438594 INTS11Q5TA45 600 aaKnown RBP4.24□□□□□ -1.73
HMGB1P12-201ENST00000438594 SWSAP1Q6NVH7 229 aa4.24□□□□□ -1.73
HMGB1P12-201ENST00000438594 ZCCHC8Q6NZY4 707 aaKnown RBP4.24□□□□□ -1.73
HMGB1P12-201ENST00000438594 CCDC129Q6ZRS4 1044 aa4.24□□□□□ -1.73
HMGB1P12-201ENST00000438594 C11orf74Q86VG3 221 aa4.24□□□□□ -1.73
HMGB1P12-201ENST00000438594 LCA5Q86VQ0 697 aa4.24□□□□□ -1.73
HMGB1P12-201ENST00000438594 ANKRD13BQ86YJ7 626 aa4.24□□□□□ -1.73
HMGB1P12-201ENST00000438594 KBTBD2Q8IY47 623 aa4.24□□□□□ -1.73
HMGB1P12-201ENST00000438594 ZNF513Q8N8E2 541 aaPredicted RBP4.24□□□□□ -1.73
HMGB1P12-201ENST00000438594 SEC14L1Q92503 715 aa4.24□□□□□ -1.73
HMGB1P12-201ENST00000438594 CCDC34Q96HJ3 373 aa4.24□□□□□ -1.73
HMGB1P12-201ENST00000438594 EXOC2Q96KP1 924 aa4.24□□□□□ -1.73
HMGB1P12-201ENST00000438594 CRBNQ96SW2 442 aa4.24□□□□□ -1.73
HMGB1P12-201ENST00000438594 MYD88Q99836 296 aa4.24□□□□□ -1.73
HMGB1P12-201ENST00000438594 PTPN18Q99952 460 aa4.24□□□□□ -1.73
HMGB1P12-201ENST00000438594 SLC12A5Q9H2X9 1139 aa4.24□□□□□ -1.73
HMGB1P12-201ENST00000438594 XPO5Q9HAV4 1204 aaKnown RBP eCLIP4.24□□□□□ -1.73
HMGB1P12-201ENST00000438594 TRMT13Q9NUP7 481 aaKnown RBP4.24□□□□□ -1.73
HMGB1P12-201ENST00000438594 INTS7Q9NVH2 962 aaKnown RBP4.24□□□□□ -1.73
HMGB1P12-201ENST00000438594 C11orf21Q9P2W6 132 aa4.24□□□□□ -1.73
HMGB1P12-201ENST00000438594 CGGBP1Q9UFW8 167 aaPredicted RBP4.24□□□□□ -1.73
HMGB1P12-201ENST00000438594 GJD2Q9UKL4 321 aa4.24□□□□□ -1.73
HMGB1P12-201ENST00000438594 MAFFQ9ULX9 164 aa4.24□□□□□ -1.73
HMGB1P12-201ENST00000438594 TTLL3Q9Y4R7 772 aa4.24□□□□□ -1.73
HMGB1P12-201ENST00000438594 LRRFIP2Q9Y608 721 aaKnown RBP4.24□□□□□ -1.73
HMGB1P12-201ENST00000438594 ITIH6Q6UXX5 1313 aa4.23□□□□□ -1.73
HMGB1P12-201ENST00000438594 SMTNL1A8MU46 457 aa4.23□□□□□ -1.73
HMGB1P12-201ENST00000438594 NPIPB8E9PQR5 432 aa4.23□□□□□ -1.73
HMGB1P12-201ENST00000438594 FZD9O00144 591 aa4.23□□□□□ -1.73
HMGB1P12-201ENST00000438594 ZNF623O75123 536 aa4.23□□□□□ -1.73
HMGB1P12-201ENST00000438594 CD4P01730 458 aa4.23□□□□□ -1.73
HMGB1P12-201ENST00000438594 THBDP07204 575 aa4.23□□□□□ -1.73
HMGB1P12-201ENST00000438594 NAT2P11245 290 aa4.23□□□□□ -1.73
HMGB1P12-201ENST00000438594 HSD3B1P14060 373 aa4.23□□□□□ -1.73
HMGB1P12-201ENST00000438594 ZNF28P17035 718 aa4.23□□□□□ -1.73
HMGB1P12-201ENST00000438594 GALNSP34059 522 aa4.23□□□□□ -1.73
HMGB1P12-201ENST00000438594 IL13P35225 146 aa4.23□□□□□ -1.73
HMGB1P12-201ENST00000438594 SNX16P57768 344 aa4.23□□□□□ -1.73
HMGB1P12-201ENST00000438594 KRT83P78385 493 aa4.23□□□□□ -1.73
HMGB1P12-201ENST00000438594 TMPRSS15P98073 1019 aa4.23□□□□□ -1.73
HMGB1P12-201ENST00000438594 ADCY1Q08828 1119 aa4.23□□□□□ -1.73
HMGB1P12-201ENST00000438594 SEPT7Q16181 437 aaKnown RBP4.23□□□□□ -1.73
HMGB1P12-201ENST00000438594 SLC10A6Q3KNW5 377 aa4.23□□□□□ -1.73
HMGB1P12-201ENST00000438594 PRR31Q5SQ13 230 aa4.23□□□□□ -1.73
HMGB1P12-201ENST00000438594 VPS53Q5VIR6 699 aa4.23□□□□□ -1.73
HMGB1P12-201ENST00000438594 PLBD1Q6P4A8 553 aa4.23□□□□□ -1.73
HMGB1P12-201ENST00000438594 MIB1Q86YT6 1006 aa4.23□□□□□ -1.73
HMGB1P12-201ENST00000438594 BRSK2Q8IWQ3 736 aa4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms