RNA–Protein interactions for RNA: ENST00000438066.1

SPEN-202, Transcript of spen family transcriptional repressor, humanhuman

TSL 3

Gene SPEN, Length 1,733 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPEN-202ENST00000438066 ZBTB34Q8NCN2 500 aa7.5□□□□□ -1.21
SPEN-202ENST00000438066 MYRIPQ8NFW9 859 aa7.5□□□□□ -1.21
SPEN-202ENST00000438066 WFDC12Q8WWY7 111 aa7.5□□□□□ -1.21
SPEN-202ENST00000438066 RAPGEF4Q8WZA2 1011 aa7.5□□□□□ -1.21
SPEN-202ENST00000438066 DPF3Q92784 378 aa7.5□□□□□ -1.21
SPEN-202ENST00000438066 SLC2A13Q96QE2 648 aa7.5□□□□□ -1.21
SPEN-202ENST00000438066 STK31Q9BXU1 1019 aa7.5□□□□□ -1.21
SPEN-202ENST00000438066 LDHAL6BQ9BYZ2 381 aaPredicted RBP7.5□□□□□ -1.21
SPEN-202ENST00000438066 CSRNP2Q9H175 543 aa7.5□□□□□ -1.21
SPEN-202ENST00000438066 PTPN22Q9Y2R2 807 aa7.5□□□□□ -1.21
SPEN-202ENST00000438066 COL14A1Q05707 1796 aaKnown RBP7.5□□□□□ -1.21
SPEN-202ENST00000438066 WDR17Q8IZU2 1322 aa7.5□□□□□ -1.21
SPEN-202ENST00000438066 NKRFO15226 690 aaKnown RBP eCLIP7.49□□□□□ -1.21
SPEN-202ENST00000438066 SRSF2Q01130 221 aaKnown RBP7.49□□□□□ -1.21
SPEN-202ENST00000438066 NUCB1Q02818 461 aa7.49□□□□□ -1.21
SPEN-202ENST00000438066 ESRP1Q6NXG1 681 aaKnown RBP7.49□□□□□ -1.21
SPEN-202ENST00000438066 EP400NLQ6ZTU2 488 aa7.49□□□□□ -1.21
SPEN-202ENST00000438066 FRMD7Q6ZUT3 714 aa7.49□□□□□ -1.21
SPEN-202ENST00000438066 TOGARAM2Q6ZUX3 1019 aa7.49□□□□□ -1.21
SPEN-202ENST00000438066 SRLQ86TD4 932 aa7.49□□□□□ -1.21
SPEN-202ENST00000438066 GTPBP4Q9BZE4 634 aaKnown RBP7.49□□□□□ -1.21
SPEN-202ENST00000438066 KLHL11Q9NVR0 708 aa7.49□□□□□ -1.21
SPEN-202ENST00000438066 TOGARAM1Q9Y4F4 1720 aa7.49□□□□□ -1.21
SPEN-202ENST00000438066 BTBD11A6QL63 1104 aa7.49□□□□□ -1.21
SPEN-202ENST00000438066 HMGB1P1B2RPK0 211 aaPredicted RBP7.49□□□□□ -1.21
SPEN-202ENST00000438066 KCNQ3O43525 872 aa7.49□□□□□ -1.21
SPEN-202ENST00000438066 C5AR1P21730 350 aa7.49□□□□□ -1.21
SPEN-202ENST00000438066 ANP32AP39687 249 aaKnown RBP7.49□□□□□ -1.21
SPEN-202ENST00000438066 CCT4P50991 539 aaKnown RBP7.49□□□□□ -1.21
SPEN-202ENST00000438066 SPIRE1Q08AE8 756 aa7.49□□□□□ -1.21
SPEN-202ENST00000438066 IFI16Q16666 785 aaKnown RBP7.49□□□□□ -1.21
SPEN-202ENST00000438066 C1orf228Q6PIY5 440 aa7.49□□□□□ -1.21
SPEN-202ENST00000438066 BEND4Q6ZU67 534 aa7.49□□□□□ -1.21
SPEN-202ENST00000438066 TEX2Q8IWB9 1127 aa7.49□□□□□ -1.21
SPEN-202ENST00000438066 GRAMD1CQ8IYS0 662 aa7.49□□□□□ -1.21
SPEN-202ENST00000438066 TBC1D32Q96NH3 1257 aa7.49□□□□□ -1.21
SPEN-202ENST00000438066 NAA15Q9BXJ9 866 aaKnown RBP7.49□□□□□ -1.21
SPEN-202ENST00000438066 NLRC4Q9NPP4 1024 aa7.49□□□□□ -1.21
SPEN-202ENST00000438066 MSRAQ9UJ68 235 aa7.49□□□□□ -1.21
SPEN-202ENST00000438066 DMTF1Q9Y222 760 aa7.49□□□□□ -1.21
SPEN-202ENST00000438066 IGF2BP3O00425 579 aaKnown RBP eCLIP7.48□□□□□ -1.21
SPEN-202ENST00000438066 MAN2B1O00754 1011 aa7.48□□□□□ -1.21
SPEN-202ENST00000438066 TBX3O15119 743 aa7.48□□□□□ -1.21
SPEN-202ENST00000438066 CYP27B1O15528 508 aa7.48□□□□□ -1.21
SPEN-202ENST00000438066 NPHS1O60500 1241 aa7.48□□□□□ -1.21
SPEN-202ENST00000438066 TMEM253P0C7T8 217 aa7.48□□□□□ -1.21
SPEN-202ENST00000438066 FXR1P51114 621 aaKnown RBP eCLIP7.48□□□□□ -1.21
SPEN-202ENST00000438066 GJA9P57773 515 aa7.48□□□□□ -1.21
SPEN-202ENST00000438066 CHAF1AQ13111 956 aaPredicted RBP7.48□□□□□ -1.21
SPEN-202ENST00000438066 LONRF1Q17RB8 773 aa7.48□□□□□ -1.21
SPEN-202ENST00000438066 TOR2AQ5JU69 321 aa7.48□□□□□ -1.21
SPEN-202ENST00000438066 XRRA1Q6P2D8 792 aa7.48□□□□□ -1.21
SPEN-202ENST00000438066 LILRA6Q6PI73 481 aa7.48□□□□□ -1.21
SPEN-202ENST00000438066 OGFOD3Q6PK18 319 aa7.48□□□□□ -1.21
SPEN-202ENST00000438066 SVOPQ8N4V2 548 aa7.48□□□□□ -1.21
SPEN-202ENST00000438066 DIS3LQ8TF46 1054 aaKnown RBP7.48□□□□□ -1.21
SPEN-202ENST00000438066 GCC1Q96CN9 775 aa7.48□□□□□ -1.21
SPEN-202ENST00000438066 TRMT2BQ96GJ1 504 aaKnown RBP7.48□□□□□ -1.21
SPEN-202ENST00000438066 ZNF496Q96IT1 587 aaPredicted RBP7.48□□□□□ -1.21
SPEN-202ENST00000438066 MEIS3Q99687 375 aa7.48□□□□□ -1.21
SPEN-202ENST00000438066 QRSL1Q9H0R6 528 aaKnown RBP7.48□□□□□ -1.21
SPEN-202ENST00000438066 MARCH2Q9P0N8 246 aa7.48□□□□□ -1.21
SPEN-202ENST00000438066 MKL2Q9ULH7 1088 aa7.48□□□□□ -1.21
SPEN-202ENST00000438066 CD40P25942 277 aa7.47□□□□□ -1.21
SPEN-202ENST00000438066 ADMP35318 185 aa7.47□□□□□ -1.21
SPEN-202ENST00000438066 STK3Q13188 491 aa7.47□□□□□ -1.21
SPEN-202ENST00000438066 TMEM132BQ14DG7 1078 aa7.47□□□□□ -1.21
SPEN-202ENST00000438066 TMEM95Q3KNT9 176 aa7.47□□□□□ -1.21
SPEN-202ENST00000438066 ATAT1Q5SQI0 421 aa7.47□□□□□ -1.21
SPEN-202ENST00000438066 CEP85Q6P2H3 762 aa7.47□□□□□ -1.21
SPEN-202ENST00000438066 CYP2R1Q6VVX0 501 aa7.47□□□□□ -1.21
SPEN-202ENST00000438066 FAM186BQ8IYM0 893 aa7.47□□□□□ -1.21
SPEN-202ENST00000438066 ANKRD44Q8N8A2 993 aa7.47□□□□□ -1.21
SPEN-202ENST00000438066 ANKRD42Q8N9B4 389 aa7.47□□□□□ -1.21
SPEN-202ENST00000438066 FAM156AQ8NDB6 213 aa7.47□□□□□ -1.21
SPEN-202ENST00000438066 SH3RF2Q8TEC5 729 aa7.47□□□□□ -1.21
SPEN-202ENST00000438066 HPS3Q969F9 1004 aa7.47□□□□□ -1.21
SPEN-202ENST00000438066 ACAP3Q96P50 834 aa7.47□□□□□ -1.21
SPEN-202ENST00000438066 NAP1L4Q99733 375 aaKnown RBP7.47□□□□□ -1.21
SPEN-202ENST00000438066 ZSWIM5Q9P217 1185 aa7.47□□□□□ -1.21
SPEN-202ENST00000438066 GULP1Q9UBP9 304 aa7.47□□□□□ -1.21
SPEN-202ENST00000438066 EDARQ9UNE0 448 aa7.47□□□□□ -1.21
SPEN-202ENST00000438066 GPR45Q9Y5Y3 372 aa7.47□□□□□ -1.21
SPEN-202ENST00000438066 TUBGCP6Q96RT7 1819 aa7.47□□□□□ -1.21
SPEN-202ENST00000438066 PHLPP1O60346 1717 aa7.47□□□□□ -1.21
SPEN-202ENST00000438066 NRAPQ86VF7 1730 aa7.47□□□□□ -1.21
SPEN-202ENST00000438066 TMEM82A0PJX8 343 aa7.47□□□□□ -1.21
SPEN-202ENST00000438066 H7BY64 318 aa7.47□□□□□ -1.21
SPEN-202ENST00000438066 PIK3R2O00459 728 aa7.47□□□□□ -1.21
SPEN-202ENST00000438066 POU2F2P09086 479 aa7.47□□□□□ -1.21
SPEN-202ENST00000438066 CLEC2LP0C7M8 214 aa7.47□□□□□ -1.21
SPEN-202ENST00000438066 AGXTP21549 392 aa7.47□□□□□ -1.21
SPEN-202ENST00000438066 ENPP1P22413 925 aa7.47□□□□□ -1.21
SPEN-202ENST00000438066 AK2P54819 239 aa7.47□□□□□ -1.21
SPEN-202ENST00000438066 ZNF385CQ66K41 422 aaPredicted RBP7.47□□□□□ -1.21
SPEN-202ENST00000438066 CCDC149Q6ZUS6 474 aa7.47□□□□□ -1.21
SPEN-202ENST00000438066 OTOP3Q7RTS5 596 aa7.47□□□□□ -1.21
SPEN-202ENST00000438066 CHD1LQ86WJ1 897 aa7.47□□□□□ -1.21
SPEN-202ENST00000438066 IFNL2Q8IZJ0 200 aa7.47□□□□□ -1.21
SPEN-202ENST00000438066 CAMKK1Q8N5S9 505 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms