RNA–Protein interactions for RNA: ENST00000437340.5

CPNE1-216, Transcript of copine 1, humanhuman

TSL 1 (best)

Gene CPNE1, Length 1,755 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-216ENST00000437340 VAMP7P51809 220 aa27.99■■■□□ 2.07
CPNE1-216ENST00000437340 SP4Q02446 784 aa27.99■■■□□ 2.07
CPNE1-216ENST00000437340 CTAGE6Q86UF2 777 aa27.99■■■□□ 2.07
CPNE1-216ENST00000437340 CTAGE4Q8IX94 777 aa27.99■■■□□ 2.07
CPNE1-216ENST00000437340 PCIF1Q9H4Z3 704 aa27.99■■■□□ 2.07
CPNE1-216ENST00000437340 PUF60Q9UHX1 559 aaKnown RBP27.99■■■□□ 2.07
CPNE1-216ENST00000437340 ATP8B3O60423 1300 aa27.99■■■□□ 2.07
CPNE1-216ENST00000437340 A0A087X0T9 212 aa27.99■■■□□ 2.07
CPNE1-216ENST00000437340 SOWAHBA6NEL2 793 aa27.99■■■□□ 2.07
CPNE1-216ENST00000437340 ENC1O14682 589 aa27.99■■■□□ 2.07
CPNE1-216ENST00000437340 PMM2O15305 246 aa27.99■■■□□ 2.07
CPNE1-216ENST00000437340 PEX10O60683 326 aa27.99■■■□□ 2.07
CPNE1-216ENST00000437340 FAM228BP0C875 321 aa27.99■■■□□ 2.07
CPNE1-216ENST00000437340 TGFB3P10600 412 aa27.99■■■□□ 2.07
CPNE1-216ENST00000437340 STAT1P42224 750 aa27.99■■■□□ 2.07
CPNE1-216ENST00000437340 PTK2Q05397 1052 aa27.99■■■□□ 2.07
CPNE1-216ENST00000437340 CETN1Q12798 172 aa27.99■■■□□ 2.07
CPNE1-216ENST00000437340 MKRN3Q13064 507 aaKnown RBP27.99■■■□□ 2.07
CPNE1-216ENST00000437340 GPAT2Q6NUI2 795 aa27.99■■■□□ 2.07
CPNE1-216ENST00000437340 SEPT14Q6ZU15 432 aa27.99■■■□□ 2.07
CPNE1-216ENST00000437340 MPHOSPH6Q99547 160 aaKnown RBP27.99■■■□□ 2.07
CPNE1-216ENST00000437340 PAGR1Q9BTK6 254 aa27.99■■■□□ 2.07
CPNE1-216ENST00000437340 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP27.99■■■□□ 2.07
CPNE1-216ENST00000437340 GPBP1L1Q9HC44 474 aaPredicted RBP27.99■■■□□ 2.07
CPNE1-216ENST00000437340 ZNF302Q9NR11 478 aa27.99■■■□□ 2.07
CPNE1-216ENST00000437340 ADAMTS1Q9UHI8 967 aa27.99■■■□□ 2.07
CPNE1-216ENST00000437340 TELO2Q9Y4R8 837 aa27.99■■■□□ 2.07
CPNE1-216ENST00000437340 IGKV6D-21A0A0A0MT36 114 aa27.98■■■□□ 2.07
CPNE1-216ENST00000437340 FSTL1Q12841 308 aa27.98■■■□□ 2.07
CPNE1-216ENST00000437340 RDH13Q8NBN7 331 aa27.98■■■□□ 2.07
CPNE1-216ENST00000437340 KCNN1Q92952 543 aa27.98■■■□□ 2.07
CPNE1-216ENST00000437340 NOX5Q96PH1 765 aa27.98■■■□□ 2.07
CPNE1-216ENST00000437340 INTS2Q9H0H0 1204 aaKnown RBP27.98■■■□□ 2.07
CPNE1-216ENST00000437340 MLXIPQ9HAP2 919 aa27.98■■■□□ 2.07
CPNE1-216ENST00000437340 XPNPEP1Q9NQW7 623 aa27.98■■■□□ 2.07
CPNE1-216ENST00000437340 CAPN6Q9Y6Q1 641 aa27.98■■■□□ 2.07
CPNE1-216ENST00000437340 ARID2Q68CP9 1835 aa27.98■■■□□ 2.07
CPNE1-216ENST00000437340 DENND3A2RUS2 1198 aa27.97■■■□□ 2.07
CPNE1-216ENST00000437340 TISP43B9A030 160 aa27.97■■■□□ 2.07
CPNE1-216ENST00000437340 GFPT2O94808 682 aa27.97■■■□□ 2.07
CPNE1-216ENST00000437340 SCP2P22307 547 aa27.97■■■□□ 2.07
CPNE1-216ENST00000437340 NEDD9Q14511 834 aa27.97■■■□□ 2.07
CPNE1-216ENST00000437340 ZNF571Q7Z3V5 609 aaPredicted RBP27.97■■■□□ 2.07
CPNE1-216ENST00000437340 VPS36Q86VN1 386 aa27.97■■■□□ 2.07
CPNE1-216ENST00000437340 BSNDQ8WZ55 320 aa27.97■■■□□ 2.07
CPNE1-216ENST00000437340 APEX2Q9UBZ4 518 aa27.97■■■□□ 2.07
CPNE1-216ENST00000437340 PRLRP16471 622 aa27.96■■■□□ 2.07
CPNE1-216ENST00000437340 OSBPP22059 807 aa27.96■■■□□ 2.07
CPNE1-216ENST00000437340 UBA1P22314 1058 aaKnown RBP27.96■■■□□ 2.07
CPNE1-216ENST00000437340 VTI1AQ96AJ9 217 aa27.96■■■□□ 2.07
CPNE1-216ENST00000437340 RPGRIP1Q96KN7 1286 aa27.96■■■□□ 2.07
CPNE1-216ENST00000437340 IFT74Q96LB3 600 aa27.96■■■□□ 2.07
CPNE1-216ENST00000437340 HDAC6Q9UBN7 1215 aa27.96■■■□□ 2.07
CPNE1-216ENST00000437340 AJAP1Q9UKB5 411 aaPredicted RBP27.96■■■□□ 2.07
CPNE1-216ENST00000437340 BTNL10A8MVZ5 291 aa27.96■■■□□ 2.07
CPNE1-216ENST00000437340 MOCS3O95396 460 aa27.96■■■□□ 2.07
CPNE1-216ENST00000437340 OATP04181 439 aa27.96■■■□□ 2.07
CPNE1-216ENST00000437340 CNGA1P29973 690 aa27.96■■■□□ 2.07
CPNE1-216ENST00000437340 CKAP4Q07065 602 aaKnown RBP27.96■■■□□ 2.07
CPNE1-216ENST00000437340 MS4A4AQ96JQ5 239 aa27.96■■■□□ 2.07
CPNE1-216ENST00000437340 DOCK5Q9H7D0 1870 aa27.95■■■□□ 2.07
CPNE1-216ENST00000437340 F8VZ95 297 aa27.95■■■□□ 2.06
CPNE1-216ENST00000437340 CCDC172P0C7W6 258 aa27.95■■■□□ 2.06
CPNE1-216ENST00000437340 SOX5P35711 763 aa27.95■■■□□ 2.06
CPNE1-216ENST00000437340 NAB2Q15742 525 aa27.95■■■□□ 2.06
CPNE1-216ENST00000437340 GJB7Q6PEY0 223 aa27.95■■■□□ 2.06
CPNE1-216ENST00000437340 LMO3Q8TAP4 145 aa27.95■■■□□ 2.06
CPNE1-216ENST00000437340 RBPJLQ9UBG7 517 aa27.95■■■□□ 2.06
CPNE1-216ENST00000437340 DNAJC12Q9UKB3 198 aa27.95■■■□□ 2.06
CPNE1-216ENST00000437340 EMSYQ7Z589 1322 aa27.95■■■□□ 2.06
CPNE1-216ENST00000437340 PASKQ96RG2 1323 aa27.95■■■□□ 2.06
CPNE1-216ENST00000437340 KIF3CO14782 793 aa27.94■■■□□ 2.06
CPNE1-216ENST00000437340 FARP2O94887 1054 aaPredicted RBP27.94■■■□□ 2.06
CPNE1-216ENST00000437340 ATP4AP20648 1035 aa27.94■■■□□ 2.06
CPNE1-216ENST00000437340 ADSSP30520 456 aa27.94■■■□□ 2.06
CPNE1-216ENST00000437340 CLCN6P51797 869 aa27.94■■■□□ 2.06
CPNE1-216ENST00000437340 HUNKP57058 714 aa27.94■■■□□ 2.06
CPNE1-216ENST00000437340 SPRYD7Q5W111 196 aa27.94■■■□□ 2.06
CPNE1-216ENST00000437340 NIFKQ9BYG3 293 aaKnown RBP27.94■■■□□ 2.06
CPNE1-216ENST00000437340 ENPEPQ07075 957 aa27.94■■■□□ 2.06
CPNE1-216ENST00000437340 BMS1Q14692 1282 aaKnown RBP27.94■■■□□ 2.06
CPNE1-216ENST00000437340 ENOX2Q16206 610 aaKnown RBP27.94■■■□□ 2.06
CPNE1-216ENST00000437340 MTERF2Q49AM1 385 aa27.94■■■□□ 2.06
CPNE1-216ENST00000437340 BRDTQ58F21 947 aaPredicted RBP27.94■■■□□ 2.06
CPNE1-216ENST00000437340 KIFC3Q9BVG8 833 aa27.94■■■□□ 2.06
CPNE1-216ENST00000437340 ARHGAP28Q9P2N2 729 aa27.94■■■□□ 2.06
CPNE1-216ENST00000437340 SALL4Q9UJQ4 1053 aa27.94■■■□□ 2.06
CPNE1-216ENST00000437340 SNX12Q9UMY4 172 aa27.94■■■□□ 2.06
CPNE1-216ENST00000437340 USP20Q9Y2K6 914 aa27.94■■■□□ 2.06
CPNE1-216ENST00000437340 ANKRD63C9JTQ0 380 aa27.93■■■□□ 2.06
CPNE1-216ENST00000437340 SORBS3O60504 671 aa27.93■■■□□ 2.06
CPNE1-216ENST00000437340 ZSCAN20P17040 1043 aaPredicted RBP27.93■■■□□ 2.06
CPNE1-216ENST00000437340 GTF2A2P52657 109 aa27.93■■■□□ 2.06
CPNE1-216ENST00000437340 POLGP54098 1239 aaPredicted RBP27.93■■■□□ 2.06
CPNE1-216ENST00000437340 DLG4P78352 724 aa27.93■■■□□ 2.06
CPNE1-216ENST00000437340 EMC2Q15006 297 aa27.93■■■□□ 2.06
CPNE1-216ENST00000437340 C1orf220Q5T0J3 134 aa27.93■■■□□ 2.06
CPNE1-216ENST00000437340 KCNV1Q6PIU1 500 aa27.93■■■□□ 2.06
CPNE1-216ENST00000437340 FBXL18Q96ME1 805 aa27.93■■■□□ 2.06
CPNE1-216ENST00000437340 POLR3FQ9H1D9 316 aaPredicted RBP27.93■■■□□ 2.06
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms