RNA–Protein interactions for RNA: ENST00000435781.5

GTF3A-203, Transcript of general transcription factor IIIA, humanhuman

TSL 5

Gene GTF3A, Length 688 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-203ENST00000435781 DACT1Q9NYF0 836 aa23.22■■□□□ 1.31
GTF3A-203ENST00000435781 PRRC2BQ5JSZ5 2229 aaKnown RBP23.22■■□□□ 1.31
GTF3A-203ENST00000435781 EPOPA6NHQ4 379 aa23.21■■□□□ 1.31
GTF3A-203ENST00000435781 INO80B-WBP1J3KQ70 363 aa23.21■■□□□ 1.31
GTF3A-203ENST00000435781 YEATS4O95619 227 aa23.21■■□□□ 1.31
GTF3A-203ENST00000435781 BRD1O95696 1058 aa23.21■■□□□ 1.31
GTF3A-203ENST00000435781 SSBP05455 408 aaKnown RBP eCLIP23.21■■□□□ 1.31
GTF3A-203ENST00000435781 PLA2G4BP0C869 781 aa23.21■■□□□ 1.31
GTF3A-203ENST00000435781 PLCG1P19174 1290 aa23.21■■□□□ 1.31
GTF3A-203ENST00000435781 GATMP50440 423 aa23.21■■□□□ 1.31
GTF3A-203ENST00000435781 SLC12A3P55017 1021 aa23.21■■□□□ 1.31
GTF3A-203ENST00000435781 ERVK-21P61565 698 aa23.21■■□□□ 1.31
GTF3A-203ENST00000435781 TWF2Q6IBS0 349 aaKnown RBP23.21■■□□□ 1.31
GTF3A-203ENST00000435781 C1orf186Q6ZWK4 172 aa23.21■■□□□ 1.31
GTF3A-203ENST00000435781 ECHDC2Q86YB7 292 aa23.21■■□□□ 1.31
GTF3A-203ENST00000435781 RASSF8Q8NHQ8 419 aa23.21■■□□□ 1.31
GTF3A-203ENST00000435781 ARNTL2Q8WYA1 636 aa23.21■■□□□ 1.31
GTF3A-203ENST00000435781 STXBP5LQ9Y2K9 1186 aa23.21■■□□□ 1.31
GTF3A-203ENST00000435781 ZDHHC9Q9Y397 364 aa23.21■■□□□ 1.31
GTF3A-203ENST00000435781 EYSQ5T1H1 3165 aa23.21■■□□□ 1.31
GTF3A-203ENST00000435781 A0A0U1RQF3 1178 aa23.2■■□□□ 1.3
GTF3A-203ENST00000435781 SPTLC2O15270 562 aa23.2■■□□□ 1.3
GTF3A-203ENST00000435781 ERLIN2O94905 339 aa23.2■■□□□ 1.3
GTF3A-203ENST00000435781 HOXA11P31270 313 aaPredicted RBP23.2■■□□□ 1.3
GTF3A-203ENST00000435781 BTG3Q14201 252 aaPredicted RBP23.2■■□□□ 1.3
GTF3A-203ENST00000435781 PCBP1Q15365 356 aaKnown RBP eCLIP23.2■■□□□ 1.3
GTF3A-203ENST00000435781 CDCA2Q69YH5 1023 aaPredicted RBP23.2■■□□□ 1.3
GTF3A-203ENST00000435781 DAW1Q8N136 415 aa23.2■■□□□ 1.3
GTF3A-203ENST00000435781 FIBCD1Q8N539 461 aa23.2■■□□□ 1.3
GTF3A-203ENST00000435781 SYMPKQ92797 1274 aaKnown RBP23.2■■□□□ 1.3
GTF3A-203ENST00000435781 C17orf80Q9BSJ5 609 aa23.2■■□□□ 1.3
GTF3A-203ENST00000435781 TRAIPQ9BWF2 469 aa23.2■■□□□ 1.3
GTF3A-203ENST00000435781 DAXXQ9UER7 740 aaPredicted RBP23.2■■□□□ 1.3
GTF3A-203ENST00000435781 MTUS1Q9ULD2 1270 aa23.2■■□□□ 1.3
GTF3A-203ENST00000435781 TSPAN1O60635 241 aa23.19■■□□□ 1.3
GTF3A-203ENST00000435781 HIP1RO75146 1068 aa23.19■■□□□ 1.3
GTF3A-203ENST00000435781 GUCY2CP25092 1073 aa23.19■■□□□ 1.3
GTF3A-203ENST00000435781 NAMPTP43490 491 aa23.19■■□□□ 1.3
GTF3A-203ENST00000435781 MAPK7Q13164 816 aa23.19■■□□□ 1.3
GTF3A-203ENST00000435781 PPP2R5AQ15172 486 aa23.19■■□□□ 1.3
GTF3A-203ENST00000435781 AMHR2Q16671 573 aa23.19■■□□□ 1.3
GTF3A-203ENST00000435781 CMTR2Q8IYT2 770 aaKnown RBP23.19■■□□□ 1.3
GTF3A-203ENST00000435781 IFT74Q96LB3 600 aa23.19■■□□□ 1.3
GTF3A-203ENST00000435781 BLOC1S4Q9NUP1 217 aa23.19■■□□□ 1.3
GTF3A-203ENST00000435781 RFXAPO00287 272 aa23.18■■□□□ 1.3
GTF3A-203ENST00000435781 PPP6R2O75170 966 aa23.18■■□□□ 1.3
GTF3A-203ENST00000435781 LINC00271P0C7V0 271 aa23.18■■□□□ 1.3
GTF3A-203ENST00000435781 FGFR1P11362 822 aa23.18■■□□□ 1.3
GTF3A-203ENST00000435781 FOSL2P15408 326 aa23.18■■□□□ 1.3
GTF3A-203ENST00000435781 ATF7P17544 494 aaPredicted RBP23.18■■□□□ 1.3
GTF3A-203ENST00000435781 ADGRE1Q14246 886 aa23.18■■□□□ 1.3
GTF3A-203ENST00000435781 PAN2Q504Q3 1202 aaKnown RBP23.18■■□□□ 1.3
GTF3A-203ENST00000435781 ATL3Q6DD88 541 aa23.18■■□□□ 1.3
GTF3A-203ENST00000435781 ZNF598Q86UK7 904 aaKnown RBP23.18■■□□□ 1.3
GTF3A-203ENST00000435781 ZBTB8OSQ8IWT0 167 aa23.18■■□□□ 1.3
GTF3A-203ENST00000435781 RAD54LQ92698 747 aa23.18■■□□□ 1.3
GTF3A-203ENST00000435781 DRC1Q96MC2 740 aa23.18■■□□□ 1.3
GTF3A-203ENST00000435781 GAS2L1Q99501 681 aaPredicted RBP23.18■■□□□ 1.3
GTF3A-203ENST00000435781 TIPINQ9BVW5 301 aa23.18■■□□□ 1.3
GTF3A-203ENST00000435781 C2orf40Q9H1Z8 148 aa23.18■■□□□ 1.3
GTF3A-203ENST00000435781 RNF19AQ9NV58 838 aa23.18■■□□□ 1.3
GTF3A-203ENST00000435781 REV3LO60673 3130 aa23.18■■□□□ 1.3
GTF3A-203ENST00000435781 ATG2AQ2TAZ0 1938 aa23.18■■□□□ 1.3
GTF3A-203ENST00000435781 PRUNE2Q8WUY3 3088 aa23.17■■□□□ 1.3
GTF3A-203ENST00000435781 MYO7AQ13402 2215 aa23.17■■□□□ 1.3
GTF3A-203ENST00000435781 AXLP30530 894 aa23.17■■□□□ 1.3
GTF3A-203ENST00000435781 TXLNAP40222 546 aa23.17■■□□□ 1.3
GTF3A-203ENST00000435781 DNM1Q05193 864 aaKnown RBP23.17■■□□□ 1.3
GTF3A-203ENST00000435781 RNF169Q8NCN4 708 aa23.17■■□□□ 1.3
GTF3A-203ENST00000435781 DEPTORQ8TB45 409 aa23.17■■□□□ 1.3
GTF3A-203ENST00000435781 SAMD11Q96NU1 681 aa23.17■■□□□ 1.3
GTF3A-203ENST00000435781 FAM105AQ9NUU6 356 aa23.17■■□□□ 1.3
GTF3A-203ENST00000435781 KCND2Q9NZV8 630 aa23.17■■□□□ 1.3
GTF3A-203ENST00000435781 TBKBP1A7MCY6 615 aa23.16■■□□□ 1.3
GTF3A-203ENST00000435781 EOMESO95936 686 aa23.16■■□□□ 1.3
GTF3A-203ENST00000435781 RAB27AP51159 221 aa23.16■■□□□ 1.3
GTF3A-203ENST00000435781 RAD51AP2Q09MP3 1159 aa23.16■■□□□ 1.3
GTF3A-203ENST00000435781 MCM6Q14566 821 aa23.16■■□□□ 1.3
GTF3A-203ENST00000435781 EPC2Q52LR7 807 aa23.16■■□□□ 1.3
GTF3A-203ENST00000435781 ARSHQ5FYA8 562 aa23.16■■□□□ 1.3
GTF3A-203ENST00000435781 UBXN11Q5T124 520 aa23.16■■□□□ 1.3
GTF3A-203ENST00000435781 PPP4R3CPQ6ZMV5 832 aa23.16■■□□□ 1.3
GTF3A-203ENST00000435781 TMEM192Q8IY95 271 aa23.16■■□□□ 1.3
GTF3A-203ENST00000435781 CLP1Q92989 425 aaKnown RBP23.16■■□□□ 1.3
GTF3A-203ENST00000435781 CPB2Q96IY4 423 aa23.16■■□□□ 1.3
GTF3A-203ENST00000435781 KIFC3Q9BVG8 833 aa23.16■■□□□ 1.3
GTF3A-203ENST00000435781 CCDC113Q9H0I3 377 aa23.16■■□□□ 1.3
GTF3A-203ENST00000435781 CCDC39Q9UFE4 941 aa23.16■■□□□ 1.3
GTF3A-203ENST00000435781 MRPL42Q9Y6G3 142 aaKnown RBP23.16■■□□□ 1.3
GTF3A-203ENST00000435781 B4GALT5O43286 388 aa23.15■■□□□ 1.3
GTF3A-203ENST00000435781 HOXA2O43364 376 aa23.15■■□□□ 1.3
GTF3A-203ENST00000435781 ZNF623O75123 536 aa23.15■■□□□ 1.3
GTF3A-203ENST00000435781 SKIP12755 728 aa23.15■■□□□ 1.3
GTF3A-203ENST00000435781 ARF4P18085 180 aaPredicted RBP23.15■■□□□ 1.3
GTF3A-203ENST00000435781 PEX3P56589 373 aa23.15■■□□□ 1.3
GTF3A-203ENST00000435781 NCBP1Q09161 790 aaKnown RBP23.15■■□□□ 1.3
GTF3A-203ENST00000435781 DHX8Q14562 1220 aaKnown RBP23.15■■□□□ 1.3
GTF3A-203ENST00000435781 FAM187BQ17R55 369 aa23.15■■□□□ 1.3
GTF3A-203ENST00000435781 NOTUMQ6P988 496 aa23.15■■□□□ 1.3
GTF3A-203ENST00000435781 GPBP1Q86WP2 473 aa23.15■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms