RNA–Protein interactions for RNA: ENST00000435197.2

SMG1P3-201, Transcript of SMG1 pseudogene 3, humanhuman

TSL 3

Gene SMG1P3, Length 416 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1P3-201ENST00000435197 GIT2Q14161 759 aa20.37■□□□□ 0.85
SMG1P3-201ENST00000435197 ANGPT1Q15389 498 aa20.37■□□□□ 0.85
SMG1P3-201ENST00000435197 NTRK3Q16288 839 aa20.37■□□□□ 0.85
SMG1P3-201ENST00000435197 TMC5Q6UXY8 1006 aa20.37■□□□□ 0.85
SMG1P3-201ENST00000435197 ACSF2Q96CM8 615 aaPredicted RBP20.37■□□□□ 0.85
SMG1P3-201ENST00000435197 BARHL2Q9NY43 387 aa20.37■□□□□ 0.85
SMG1P3-201ENST00000435197 DACT1Q9NYF0 836 aa20.37■□□□□ 0.85
SMG1P3-201ENST00000435197 PCDHA10Q9Y5I2 948 aa20.37■□□□□ 0.85
SMG1P3-201ENST00000435197 ZC3H11AO75152 810 aaKnown RBP eCLIP20.36■□□□□ 0.85
SMG1P3-201ENST00000435197 FGFR4P22455 802 aa20.36■□□□□ 0.85
SMG1P3-201ENST00000435197 SETQ01105 290 aaPredicted RBP20.36■□□□□ 0.85
SMG1P3-201ENST00000435197 AKAP17AQ02040 695 aaKnown RBP20.36■□□□□ 0.85
SMG1P3-201ENST00000435197 SSRP1Q08945 709 aaKnown RBP20.36■□□□□ 0.85
SMG1P3-201ENST00000435197 TDGQ13569 410 aa20.36■□□□□ 0.85
SMG1P3-201ENST00000435197 JAKMIP3Q5VZ66 844 aa20.36■□□□□ 0.85
SMG1P3-201ENST00000435197 DDX53Q86TM3 631 aaKnown RBP20.36■□□□□ 0.85
SMG1P3-201ENST00000435197 CABP7Q86V35 215 aa20.36■□□□□ 0.85
SMG1P3-201ENST00000435197 CCDC83Q8IWF9 413 aa20.36■□□□□ 0.85
SMG1P3-201ENST00000435197 TRIM22Q8IYM9 498 aa20.36■□□□□ 0.85
SMG1P3-201ENST00000435197 SCLT1Q96NL6 688 aa20.36■□□□□ 0.85
SMG1P3-201ENST00000435197 RTP3Q9BQQ7 232 aa20.36■□□□□ 0.85
SMG1P3-201ENST00000435197 SFXN1Q9H9B4 322 aa20.36■□□□□ 0.85
SMG1P3-201ENST00000435197 TCEAL9Q9UHQ7 104 aa20.36■□□□□ 0.85
SMG1P3-201ENST00000435197 DUSP12Q9UNI6 340 aa20.36■□□□□ 0.85
SMG1P3-201ENST00000435197 V9GY48 417 aaPredicted RBP20.36■□□□□ 0.85
SMG1P3-201ENST00000435197 CCDC149Q6ZUS6 474 aa20.35■□□□□ 0.85
SMG1P3-201ENST00000435197 OTOP3Q7RTS5 596 aa20.35■□□□□ 0.85
SMG1P3-201ENST00000435197 GPR149Q86SP6 731 aa20.35■□□□□ 0.85
SMG1P3-201ENST00000435197 DTWD2Q8NBA8 298 aa20.35■□□□□ 0.85
SMG1P3-201ENST00000435197 BCL7CQ8WUZ0 217 aaPredicted RBP20.35■□□□□ 0.85
SMG1P3-201ENST00000435197 IGSF21Q96ID5 467 aa20.35■□□□□ 0.85
SMG1P3-201ENST00000435197 ZSCAN21Q9Y5A6 473 aaPredicted RBP20.35■□□□□ 0.85
SMG1P3-201ENST00000435197 CARNS1A5YM72 827 aa20.34■□□□□ 0.85
SMG1P3-201ENST00000435197 PRPF3O43395 683 aaKnown RBP20.34■□□□□ 0.85
SMG1P3-201ENST00000435197 OATP04181 439 aa20.34■□□□□ 0.85
SMG1P3-201ENST00000435197 CUL4AQ13619 759 aa20.34■□□□□ 0.85
SMG1P3-201ENST00000435197 PPFIBP1Q86W92 1011 aa20.34■□□□□ 0.85
SMG1P3-201ENST00000435197 SIX5Q8N196 739 aa20.34■□□□□ 0.85
SMG1P3-201ENST00000435197 RSPH1Q8WYR4 309 aa20.34■□□□□ 0.85
SMG1P3-201ENST00000435197 RNF26Q9BY78 433 aaPredicted RBP20.34■□□□□ 0.85
SMG1P3-201ENST00000435197 FBXL21Q9UKT6 434 aa20.34■□□□□ 0.85
SMG1P3-201ENST00000435197 RBM19Q9Y4C8 960 aaKnown RBP20.34■□□□□ 0.85
SMG1P3-201ENST00000435197 CACNA1AO00555 2505 aa20.33■□□□□ 0.85
SMG1P3-201ENST00000435197 DCHS1Q96JQ0 3298 aa20.33■□□□□ 0.85
SMG1P3-201ENST00000435197 ZNF862O60290 1169 aa20.33■□□□□ 0.85
SMG1P3-201ENST00000435197 PHKA2P46019 1235 aa20.33■□□□□ 0.85
SMG1P3-201ENST00000435197 PTPN14Q15678 1187 aa20.33■□□□□ 0.85
SMG1P3-201ENST00000435197 NLRP7Q8WX94 980 aa20.33■□□□□ 0.85
SMG1P3-201ENST00000435197 SLC26A6Q9BXS9 759 aa20.33■□□□□ 0.85
SMG1P3-201ENST00000435197 NRDE2Q9H7Z3 1164 aa20.33■□□□□ 0.85
SMG1P3-201ENST00000435197 KCNK12Q9HB15 430 aa20.33■□□□□ 0.85
SMG1P3-201ENST00000435197 TBC1D13Q9NVG8 400 aa20.33■□□□□ 0.85
SMG1P3-201ENST00000435197 SAMM50Q9Y512 469 aa20.33■□□□□ 0.85
SMG1P3-201ENST00000435197 SPDYE4A6NLX3 237 aa20.32■□□□□ 0.84
SMG1P3-201ENST00000435197 WDR64B1ANS9 1081 aa20.32■□□□□ 0.84
SMG1P3-201ENST00000435197 CSDE1O75534 798 aaKnown RBP20.32■□□□□ 0.84
SMG1P3-201ENST00000435197 CTDNEP1O95476 244 aa20.32■□□□□ 0.84
SMG1P3-201ENST00000435197 GALTP07902 379 aa20.32■□□□□ 0.84
SMG1P3-201ENST00000435197 HMGN5P82970 282 aaKnown RBP20.32■□□□□ 0.84
SMG1P3-201ENST00000435197 PRKCEQ02156 737 aa20.32■□□□□ 0.84
SMG1P3-201ENST00000435197 ST3GAL1Q11201 340 aa20.32■□□□□ 0.84
SMG1P3-201ENST00000435197 NSUN7Q8NE18 718 aaKnown RBP20.32■□□□□ 0.84
SMG1P3-201ENST00000435197 LPPQ93052 612 aa20.32■□□□□ 0.84
SMG1P3-201ENST00000435197 PHKBQ93100 1093 aa20.32■□□□□ 0.84
SMG1P3-201ENST00000435197 INTS4Q96HW7 963 aaKnown RBP20.32■□□□□ 0.84
SMG1P3-201ENST00000435197 TRAIPQ9BWF2 469 aa20.32■□□□□ 0.84
SMG1P3-201ENST00000435197 VN1R3Q9BXE9 311 aa20.32■□□□□ 0.84
SMG1P3-201ENST00000435197 CHST12Q9NRB3 414 aa20.32■□□□□ 0.84
SMG1P3-201ENST00000435197 NRBP2Q9NSY0 501 aa20.32■□□□□ 0.84
SMG1P3-201ENST00000435197 STK36Q9NRP7 1315 aa20.31■□□□□ 0.84
SMG1P3-201ENST00000435197 ADAMTS3O15072 1205 aa20.31■□□□□ 0.84
SMG1P3-201ENST00000435197 DEXIO95424 95 aa20.31■□□□□ 0.84
SMG1P3-201ENST00000435197 HSP90AA1P07900 732 aaKnown RBP20.31■□□□□ 0.84
SMG1P3-201ENST00000435197 PRR16Q569H4 304 aa20.31■□□□□ 0.84
SMG1P3-201ENST00000435197 GLB1LQ6UWU2 654 aa20.31■□□□□ 0.84
SMG1P3-201ENST00000435197 WASF1Q92558 559 aa20.31■□□□□ 0.84
SMG1P3-201ENST00000435197 IGSF9Q9P2J2 1179 aa20.31■□□□□ 0.84
SMG1P3-201ENST00000435197 KIF3AQ9Y496 699 aa20.31■□□□□ 0.84
SMG1P3-201ENST00000435197 VPS13AQ96RL7 3174 aa20.31■□□□□ 0.84
SMG1P3-201ENST00000435197 FANCMQ8IYD8 2048 aa20.31■□□□□ 0.84
SMG1P3-201ENST00000435197 NARSO43776 548 aaKnown RBP20.3■□□□□ 0.84
SMG1P3-201ENST00000435197 SLC11A1P49279 550 aa20.3■□□□□ 0.84
SMG1P3-201ENST00000435197 CLCN4P51793 760 aa20.3■□□□□ 0.84
SMG1P3-201ENST00000435197 TBC1D8BQ0IIM8 1120 aa20.3■□□□□ 0.84
SMG1P3-201ENST00000435197 DRP2Q13474 957 aa20.3■□□□□ 0.84
SMG1P3-201ENST00000435197 UGCGQ16739 394 aa20.3■□□□□ 0.84
SMG1P3-201ENST00000435197 LETM2Q2VYF4 491 aa20.3■□□□□ 0.84
SMG1P3-201ENST00000435197 LONRF3Q496Y0 759 aa20.3■□□□□ 0.84
SMG1P3-201ENST00000435197 NOMO2Q5JPE7 1267 aa20.3■□□□□ 0.84
SMG1P3-201ENST00000435197 TWF2Q6IBS0 349 aaKnown RBP20.3■□□□□ 0.84
SMG1P3-201ENST00000435197 KLHL5Q96PQ7 755 aa20.3■□□□□ 0.84
SMG1P3-201ENST00000435197 EMILIN2Q9BXX0 1053 aa20.3■□□□□ 0.84
SMG1P3-201ENST00000435197 GCOM2Q9BZD3 368 aaPredicted RBP20.3■□□□□ 0.84
SMG1P3-201ENST00000435197 SEMA4AQ9H3S1 761 aa20.3■□□□□ 0.84
SMG1P3-201ENST00000435197 DISC1Q9NRI5 854 aa20.3■□□□□ 0.84
SMG1P3-201ENST00000435197 ORC3Q9UBD5 711 aaPredicted RBP20.3■□□□□ 0.84
SMG1P3-201ENST00000435197 DNAJB4Q9UDY4 337 aa20.3■□□□□ 0.84
SMG1P3-201ENST00000435197 INPP5FQ9Y2H2 1132 aa20.3■□□□□ 0.84
SMG1P3-201ENST00000435197 ESYT2A0FGR8 921 aa20.29■□□□□ 0.84
SMG1P3-201ENST00000435197 MEIS3P2A8K0S8 358 aa20.29■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms