RNA–Protein interactions for RNA: ENST00000435083.5

CHRNA1-207, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 3

Gene CHRNA1, Length 1,596 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-207ENST00000435083 DNAJB4Q9UDY4 337 aa13.05□□□□□ -0.32
CHRNA1-207ENST00000435083 MEIS3P2A8K0S8 358 aa13.04□□□□□ -0.32
CHRNA1-207ENST00000435083 DDX11L8A8MPP1 907 aa13.04□□□□□ -0.32
CHRNA1-207ENST00000435083 EDIL3O43854 480 aa13.04□□□□□ -0.32
CHRNA1-207ENST00000435083 OFD1O75665 1012 aa13.04□□□□□ -0.32
CHRNA1-207ENST00000435083 SSBP05455 408 aaKnown RBP eCLIP13.04□□□□□ -0.32
CHRNA1-207ENST00000435083 KLRC2P26717 231 aa13.04□□□□□ -0.32
CHRNA1-207ENST00000435083 SLC11A1P49279 550 aa13.04□□□□□ -0.32
CHRNA1-207ENST00000435083 USP11P51784 963 aa13.04□□□□□ -0.32
CHRNA1-207ENST00000435083 FOXK2Q01167 660 aa13.04□□□□□ -0.32
CHRNA1-207ENST00000435083 PTPN14Q15678 1187 aa13.04□□□□□ -0.32
CHRNA1-207ENST00000435083 CCDC149Q6ZUS6 474 aa13.04□□□□□ -0.32
CHRNA1-207ENST00000435083 OTOP3Q7RTS5 596 aa13.04□□□□□ -0.32
CHRNA1-207ENST00000435083 CATSPER4Q7RTX7 472 aa13.04□□□□□ -0.32
CHRNA1-207ENST00000435083 GPR149Q86SP6 731 aa13.04□□□□□ -0.32
CHRNA1-207ENST00000435083 RHPN2Q8IUC4 686 aa13.04□□□□□ -0.32
CHRNA1-207ENST00000435083 CCDC148Q8NFR7 591 aa13.04□□□□□ -0.32
CHRNA1-207ENST00000435083 TRAIPQ9BWF2 469 aa13.04□□□□□ -0.32
CHRNA1-207ENST00000435083 EMILIN2Q9BXX0 1053 aa13.04□□□□□ -0.32
CHRNA1-207ENST00000435083 NIFKQ9BYG3 293 aaKnown RBP13.04□□□□□ -0.32
CHRNA1-207ENST00000435083 SFXN1Q9H9B4 322 aa13.04□□□□□ -0.32
CHRNA1-207ENST00000435083 VPS54Q9P1Q0 977 aa13.04□□□□□ -0.32
CHRNA1-207ENST00000435083 SUCLA2Q9P2R7 463 aaPredicted RBP13.04□□□□□ -0.32
CHRNA1-207ENST00000435083 FBXL21Q9UKT6 434 aa13.04□□□□□ -0.32
CHRNA1-207ENST00000435083 PI15O43692 258 aa13.03□□□□□ -0.32
CHRNA1-207ENST00000435083 RAB27AP51159 221 aa13.03□□□□□ -0.32
CHRNA1-207ENST00000435083 TDGQ13569 410 aa13.03□□□□□ -0.32
CHRNA1-207ENST00000435083 CWF19L1Q69YN2 538 aaKnown RBP13.03□□□□□ -0.32
CHRNA1-207ENST00000435083 ZNF410Q86VK4 478 aa13.03□□□□□ -0.32
CHRNA1-207ENST00000435083 ZNF280BQ86YH2 543 aa13.03□□□□□ -0.32
CHRNA1-207ENST00000435083 KSR1Q8IVT5 923 aa13.03□□□□□ -0.32
CHRNA1-207ENST00000435083 PGBD4Q96DM1 585 aa13.03□□□□□ -0.32
CHRNA1-207ENST00000435083 NLRP4Q96MN2 994 aa13.03□□□□□ -0.32
CHRNA1-207ENST00000435083 KLHL5Q96PQ7 755 aa13.03□□□□□ -0.32
CHRNA1-207ENST00000435083 VN1R3Q9BXE9 311 aa13.03□□□□□ -0.32
CHRNA1-207ENST00000435083 SLC26A6Q9BXS9 759 aa13.03□□□□□ -0.32
CHRNA1-207ENST00000435083 DENND4AQ7Z401 1863 aa13.03□□□□□ -0.32
CHRNA1-207ENST00000435083 IGKV6-21A0A0C4DH24 114 aa13.03□□□□□ -0.32
CHRNA1-207ENST00000435083 B4GALT3O60512 393 aa13.03□□□□□ -0.32
CHRNA1-207ENST00000435083 ZNF623O75123 536 aa13.03□□□□□ -0.32
CHRNA1-207ENST00000435083 PSMD10O75832 226 aa13.03□□□□□ -0.32
CHRNA1-207ENST00000435083 STBD1O95210 358 aa13.03□□□□□ -0.32
CHRNA1-207ENST00000435083 CNPP09543 421 aaKnown RBP13.03□□□□□ -0.32
CHRNA1-207ENST00000435083 NLRP5P59047 1200 aa13.03□□□□□ -0.32
CHRNA1-207ENST00000435083 BMP2KLQ5H9B9 411 aa13.03□□□□□ -0.32
CHRNA1-207ENST00000435083 ADSSL1Q8N142 457 aa13.03□□□□□ -0.32
CHRNA1-207ENST00000435083 RDM1Q8NG50 284 aa13.03□□□□□ -0.32
CHRNA1-207ENST00000435083 URGCPQ8TCY9 931 aa13.03□□□□□ -0.32
CHRNA1-207ENST00000435083 TBCKQ8TEA7 893 aa13.03□□□□□ -0.32
CHRNA1-207ENST00000435083 FAM193BQ96PV7 902 aaPredicted RBP13.03□□□□□ -0.32
CHRNA1-207ENST00000435083 CEP89Q96ST8 783 aa13.03□□□□□ -0.32
CHRNA1-207ENST00000435083 USP34Q70CQ2 3546 aa13.02□□□□□ -0.33
CHRNA1-207ENST00000435083 STK25O00506 426 aa13.02□□□□□ -0.33
CHRNA1-207ENST00000435083 MAFO75444 373 aaPredicted RBP13.02□□□□□ -0.33
CHRNA1-207ENST00000435083 DDHD2O94830 711 aa13.02□□□□□ -0.33
CHRNA1-207ENST00000435083 ALDH2P05091 517 aa13.02□□□□□ -0.33
CHRNA1-207ENST00000435083 NPR3P17342 541 aa13.02□□□□□ -0.33
CHRNA1-207ENST00000435083 AOC1P19801 751 aa13.02□□□□□ -0.33
CHRNA1-207ENST00000435083 CLCN4P51793 760 aa13.02□□□□□ -0.33
CHRNA1-207ENST00000435083 SIX5Q8N196 739 aa13.02□□□□□ -0.33
CHRNA1-207ENST00000435083 JAKMIP1Q96N16 626 aaKnown RBP13.02□□□□□ -0.33
CHRNA1-207ENST00000435083 RNF26Q9BY78 433 aaPredicted RBP13.02□□□□□ -0.33
CHRNA1-207ENST00000435083 KCNK12Q9HB15 430 aa13.02□□□□□ -0.33
CHRNA1-207ENST00000435083 MRPL17Q9NRX2 175 aaKnown RBP13.02□□□□□ -0.33
CHRNA1-207ENST00000435083 FAN1Q9Y2M0 1017 aa13.02□□□□□ -0.33
CHRNA1-207ENST00000435083 PCDHB2Q9Y5E7 798 aa13.02□□□□□ -0.33
CHRNA1-207ENST00000435083 PTPRZ1P23471 2315 aaPredicted RBP13.01□□□□□ -0.33
CHRNA1-207ENST00000435083 C2CD2LO14523 706 aa13.01□□□□□ -0.33
CHRNA1-207ENST00000435083 TDP2O95551 362 aa13.01□□□□□ -0.33
CHRNA1-207ENST00000435083 NTRK3Q16288 839 aa13.01□□□□□ -0.33
CHRNA1-207ENST00000435083 LETM2Q2VYF4 491 aa13.01□□□□□ -0.33
CHRNA1-207ENST00000435083 Q4G0T1 1027 aa13.01□□□□□ -0.33
CHRNA1-207ENST00000435083 BLOC1S2Q6QNY1 142 aa13.01□□□□□ -0.33
CHRNA1-207ENST00000435083 AGMOQ6ZNB7 445 aa13.01□□□□□ -0.33
CHRNA1-207ENST00000435083 SKAP1Q86WV1 359 aa13.01□□□□□ -0.33
CHRNA1-207ENST00000435083 CCDC105Q8IYK2 499 aa13.01□□□□□ -0.33
CHRNA1-207ENST00000435083 DTWD2Q8NBA8 298 aa13.01□□□□□ -0.33
CHRNA1-207ENST00000435083 RTP3Q9BQQ7 232 aa13.01□□□□□ -0.33
CHRNA1-207ENST00000435083 STK39Q9UEW8 545 aa13.01□□□□□ -0.33
CHRNA1-207ENST00000435083 DUSP12Q9UNI6 340 aa13.01□□□□□ -0.33
CHRNA1-207ENST00000435083 C2orf16Q68DN1 1984 aa13.01□□□□□ -0.33
CHRNA1-207ENST00000435083 NID2Q14112 1375 aa13□□□□□ -0.33
CHRNA1-207ENST00000435083 NRP1O14786 923 aa13□□□□□ -0.33
CHRNA1-207ENST00000435083 POMCP01189 267 aa13□□□□□ -0.33
CHRNA1-207ENST00000435083 MYBP10242 640 aa13□□□□□ -0.33
CHRNA1-207ENST00000435083 GBP2P32456 591 aaPredicted RBP13□□□□□ -0.33
CHRNA1-207ENST00000435083 ID4P47928 161 aa13□□□□□ -0.33
CHRNA1-207ENST00000435083 AFF1P51825 1210 aaKnown RBP13□□□□□ -0.33
CHRNA1-207ENST00000435083 CCT2P78371 535 aaKnown RBP13□□□□□ -0.33
CHRNA1-207ENST00000435083 ANGPT1Q15389 498 aa13□□□□□ -0.33
CHRNA1-207ENST00000435083 PLA2G4FQ68DD2 849 aa13□□□□□ -0.33
CHRNA1-207ENST00000435083 C15orf39Q6ZRI6 1047 aa13□□□□□ -0.33
CHRNA1-207ENST00000435083 JPH2Q9BR39 696 aaPredicted RBP13□□□□□ -0.33
CHRNA1-207ENST00000435083 TMEM175Q9BSA9 504 aa13□□□□□ -0.33
CHRNA1-207ENST00000435083 C22orf23Q9BZE7 217 aa13□□□□□ -0.33
CHRNA1-207ENST00000435083 RSAD1Q9HA92 442 aa13□□□□□ -0.33
CHRNA1-207ENST00000435083 NCOA5Q9HCD5 579 aaKnown RBP13□□□□□ -0.33
CHRNA1-207ENST00000435083 SH3GLB2Q9NR46 395 aa13□□□□□ -0.33
CHRNA1-207ENST00000435083 AGPAT5Q9NUQ2 364 aa13□□□□□ -0.33
CHRNA1-207ENST00000435083 IGSF9Q9P2J2 1179 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms