RNA–Protein interactions for RNA: ENST00000434205.7

TSEN54-202, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

TSL 5

Gene TSEN54, Length 627 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-202ENST00000434205 DNM3Q9UQ16 869 aa18.34■□□□□ 0.53
TSEN54-202ENST00000434205 LRRIQ4A6NIV6 560 aa18.33■□□□□ 0.52
TSEN54-202ENST00000434205 INO80B-WBP1J3KQ70 363 aa18.33■□□□□ 0.52
TSEN54-202ENST00000434205 TSPAN1O60635 241 aa18.33■□□□□ 0.52
TSEN54-202ENST00000434205 EOMESO95936 686 aa18.33■□□□□ 0.52
TSEN54-202ENST00000434205 RB1P06400 928 aa18.33■□□□□ 0.52
TSEN54-202ENST00000434205 SKIP12755 728 aa18.33■□□□□ 0.52
TSEN54-202ENST00000434205 RAB27AP51159 221 aa18.33■□□□□ 0.52
TSEN54-202ENST00000434205 GPM6BQ13491 265 aa18.33■□□□□ 0.52
TSEN54-202ENST00000434205 PTPAQ15257 358 aa18.33■□□□□ 0.52
TSEN54-202ENST00000434205 AMHR2Q16671 573 aa18.33■□□□□ 0.52
TSEN54-202ENST00000434205 CDCA2Q69YH5 1023 aaPredicted RBP18.33■□□□□ 0.52
TSEN54-202ENST00000434205 KCTD17Q8N5Z5 321 aa18.33■□□□□ 0.52
TSEN54-202ENST00000434205 RNF169Q8NCN4 708 aa18.33■□□□□ 0.52
TSEN54-202ENST00000434205 PPM1EQ8WY54 764 aa18.33■□□□□ 0.52
TSEN54-202ENST00000434205 PNMA5Q96PV4 448 aa18.33■□□□□ 0.52
TSEN54-202ENST00000434205 C11orf84Q9BUA3 381 aaPredicted RBP18.33■□□□□ 0.52
TSEN54-202ENST00000434205 TMEM117Q9H0C3 514 aa18.33■□□□□ 0.52
TSEN54-202ENST00000434205 FAM105AQ9NUU6 356 aa18.33■□□□□ 0.52
TSEN54-202ENST00000434205 CLIC4Q9Y696 253 aa18.33■□□□□ 0.52
TSEN54-202ENST00000434205 SLC26A4O43511 780 aa18.32■□□□□ 0.52
TSEN54-202ENST00000434205 AXLP30530 894 aa18.32■□□□□ 0.52
TSEN54-202ENST00000434205 HOXA11P31270 313 aaPredicted RBP18.32■□□□□ 0.52
TSEN54-202ENST00000434205 LONP1P36776 959 aaKnown RBP18.32■□□□□ 0.52
TSEN54-202ENST00000434205 NAMPTP43490 491 aa18.32■□□□□ 0.52
TSEN54-202ENST00000434205 GRIN1Q05586 938 aa18.32■□□□□ 0.52
TSEN54-202ENST00000434205 ZRSR1Q15695 479 aaKnown RBP18.32■□□□□ 0.52
TSEN54-202ENST00000434205 CCDC85BQ15834 202 aaPredicted RBP18.32■□□□□ 0.52
TSEN54-202ENST00000434205 TMEM119Q4V9L6 283 aa18.32■□□□□ 0.52
TSEN54-202ENST00000434205 CLLU1OSQ5K130 101 aa18.32■□□□□ 0.52
TSEN54-202ENST00000434205 CABP7Q86V35 215 aa18.32■□□□□ 0.52
TSEN54-202ENST00000434205 ABI1Q8IZP0 508 aa18.32■□□□□ 0.52
TSEN54-202ENST00000434205 BSNDQ8WZ55 320 aa18.32■□□□□ 0.52
TSEN54-202ENST00000434205 CASD1Q96PB1 797 aa18.32■□□□□ 0.52
TSEN54-202ENST00000434205 PLVAPQ9BX97 442 aa18.32■□□□□ 0.52
TSEN54-202ENST00000434205 PRRC2BQ5JSZ5 2229 aaKnown RBP18.32■□□□□ 0.52
TSEN54-202ENST00000434205 PLXNA4Q9HCM2 1894 aa18.32■□□□□ 0.52
TSEN54-202ENST00000434205 PPP2R5AQ15172 486 aa18.31■□□□□ 0.52
TSEN54-202ENST00000434205 UBXN11Q5T124 520 aa18.31■□□□□ 0.52
TSEN54-202ENST00000434205 NOTUMQ6P988 496 aa18.31■□□□□ 0.52
TSEN54-202ENST00000434205 PHF6Q8IWS0 365 aaKnown RBP eCLIP18.31■□□□□ 0.52
TSEN54-202ENST00000434205 ZBTB8OSQ8IWT0 167 aa18.31■□□□□ 0.52
TSEN54-202ENST00000434205 LRRC43Q8N309 656 aa18.31■□□□□ 0.52
TSEN54-202ENST00000434205 SLC17A8Q8NDX2 589 aa18.31■□□□□ 0.52
TSEN54-202ENST00000434205 RSPH1Q8WYR4 309 aa18.31■□□□□ 0.52
TSEN54-202ENST00000434205 KIFAP3Q92845 792 aa18.31■□□□□ 0.52
TSEN54-202ENST00000434205 P2RX5Q93086 422 aa18.31■□□□□ 0.52
TSEN54-202ENST00000434205 MRPL38Q96DV4 380 aaKnown RBP18.31■□□□□ 0.52
TSEN54-202ENST00000434205 CCDC51Q96ER9 411 aa18.31■□□□□ 0.52
TSEN54-202ENST00000434205 CDK5RAP3Q96JB5 506 aa18.31■□□□□ 0.52
TSEN54-202ENST00000434205 HCSTQ9UBK5 93 aa18.31■□□□□ 0.52
TSEN54-202ENST00000434205 ZNF623O75123 536 aa18.3■□□□□ 0.52
TSEN54-202ENST00000434205 PDIA4P13667 645 aaKnown RBP18.3■□□□□ 0.52
TSEN54-202ENST00000434205 PTPROQ16827 1216 aa18.3■□□□□ 0.52
TSEN54-202ENST00000434205 HELQQ8TDG4 1101 aa18.3■□□□□ 0.52
TSEN54-202ENST00000434205 USP28Q96RU2 1077 aa18.3■□□□□ 0.52
TSEN54-202ENST00000434205 RUSC1Q9BVN2 902 aa18.3■□□□□ 0.52
TSEN54-202ENST00000434205 C2orf40Q9H1Z8 148 aa18.3■□□□□ 0.52
TSEN54-202ENST00000434205 CWH43Q9H720 699 aa18.3■□□□□ 0.52
TSEN54-202ENST00000434205 TYW1Q9NV66 732 aaKnown RBP18.3■□□□□ 0.52
TSEN54-202ENST00000434205 PRMT7Q9NVM4 692 aaPredicted RBP18.3■□□□□ 0.52
TSEN54-202ENST00000434205 PCDHB2Q9Y5E7 798 aa18.3■□□□□ 0.52
TSEN54-202ENST00000434205 MORC2Q9Y6X9 1032 aaPredicted RBP18.3■□□□□ 0.52
TSEN54-202ENST00000434205 CNTNAP2Q9UHC6 1331 aa18.29■□□□□ 0.52
TSEN54-202ENST00000434205 B4GALT5O43286 388 aa18.29■□□□□ 0.52
TSEN54-202ENST00000434205 ARF4P18085 180 aaPredicted RBP18.29■□□□□ 0.52
TSEN54-202ENST00000434205 MARCKSP29966 332 aaPredicted RBP18.29■□□□□ 0.52
TSEN54-202ENST00000434205 UBA7P41226 1012 aa18.29■□□□□ 0.52
TSEN54-202ENST00000434205 NCBP1Q09161 790 aaKnown RBP18.29■□□□□ 0.52
TSEN54-202ENST00000434205 NAALADL2Q58DX5 795 aa18.29■□□□□ 0.52
TSEN54-202ENST00000434205 SPOUT1Q5T280 376 aaKnown RBP18.29■□□□□ 0.52
TSEN54-202ENST00000434205 RINT1Q6NUQ1 792 aa18.29■□□□□ 0.52
TSEN54-202ENST00000434205 PPP4R3CPQ6ZMV5 832 aa18.29■□□□□ 0.52
TSEN54-202ENST00000434205 LRRC55Q6ZSA7 311 aa18.29■□□□□ 0.52
TSEN54-202ENST00000434205 C1orf186Q6ZWK4 172 aa18.29■□□□□ 0.52
TSEN54-202ENST00000434205 DEPTORQ8TB45 409 aa18.29■□□□□ 0.52
TSEN54-202ENST00000434205 LPPQ93052 612 aa18.29■□□□□ 0.52
TSEN54-202ENST00000434205 PGBD4Q96DM1 585 aa18.29■□□□□ 0.52
TSEN54-202ENST00000434205 CALML4Q96GE6 196 aa18.29■□□□□ 0.52
TSEN54-202ENST00000434205 CPB2Q96IY4 423 aa18.29■□□□□ 0.52
TSEN54-202ENST00000434205 IFT74Q96LB3 600 aa18.29■□□□□ 0.52
TSEN54-202ENST00000434205 PRIMPOLQ96LW4 560 aa18.29■□□□□ 0.52
TSEN54-202ENST00000434205 PLIN2Q99541 437 aa18.29■□□□□ 0.52
TSEN54-202ENST00000434205 MRPL9Q9BYD2 267 aaKnown RBP18.29■□□□□ 0.52
TSEN54-202ENST00000434205 LMAN2LQ9H0V9 348 aa18.29■□□□□ 0.52
TSEN54-202ENST00000434205 PRDM6Q9NQX0 595 aa18.29■□□□□ 0.52
TSEN54-202ENST00000434205 AAASQ9NRG9 546 aa18.29■□□□□ 0.52
TSEN54-202ENST00000434205 FBXO2Q9UK22 296 aaPredicted RBP18.29■□□□□ 0.52
TSEN54-202ENST00000434205 MEIS3P2A8K0S8 358 aa18.28■□□□□ 0.52
TSEN54-202ENST00000434205 GRM6O15303 877 aa18.28■□□□□ 0.52
TSEN54-202ENST00000434205 HIP1RO75146 1068 aa18.28■□□□□ 0.52
TSEN54-202ENST00000434205 LAG3P18627 525 aa18.28■□□□□ 0.52
TSEN54-202ENST00000434205 GUCY2CP25092 1073 aa18.28■□□□□ 0.52
TSEN54-202ENST00000434205 SLC12A3P55017 1021 aa18.28■□□□□ 0.52
TSEN54-202ENST00000434205 CEBPZQ03701 1054 aaKnown RBP18.28■□□□□ 0.52
TSEN54-202ENST00000434205 FAM187BQ17R55 369 aa18.28■□□□□ 0.52
TSEN54-202ENST00000434205 TIGD5Q53EQ6 642 aa18.28■□□□□ 0.52
TSEN54-202ENST00000434205 MRPL10Q7Z7H8 261 aaKnown RBP18.28■□□□□ 0.52
TSEN54-202ENST00000434205 DAW1Q8N136 415 aa18.28■□□□□ 0.52
TSEN54-202ENST00000434205 SYT2Q8N9I0 419 aaPredicted RBP18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms