RNA–Protein interactions for RNA: ENST00000432057.2

VRK2-205, Transcript of vaccinia related kinase 2, humanhuman

TSL 1 (best)

Gene VRK2, Length 1,870 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-205ENST00000432057 PLEKHO2Q8TD55 490 aa21.32■■□□□ 1
VRK2-205ENST00000432057 SLC10A4Q96EP9 437 aa21.32■■□□□ 1
VRK2-205ENST00000432057 MAP7D2Q96T17 732 aa21.32■■□□□ 1
VRK2-205ENST00000432057 PCYT2Q99447 389 aa21.32■■□□□ 1
VRK2-205ENST00000432057 NTPCRQ9BSD7 190 aaKnown RBP21.32■■□□□ 1
VRK2-205ENST00000432057 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP21.32■■□□□ 1
VRK2-205ENST00000432057 HDAC6Q9UBN7 1215 aa21.32■■□□□ 1
VRK2-205ENST00000432057 A0A087X0T9 212 aa21.31■■□□□ 1
VRK2-205ENST00000432057 FAM228BP0C875 321 aa21.31■■□□□ 1
VRK2-205ENST00000432057 PNMA6AP0CW24 399 aaPredicted RBP21.31■■□□□ 1
VRK2-205ENST00000432057 ADSSP30520 456 aa21.31■■□□□ 1
VRK2-205ENST00000432057 VAMP7P51809 220 aa21.31■■□□□ 1
VRK2-205ENST00000432057 RTP1P59025 263 aa21.31■■□□□ 1
VRK2-205ENST00000432057 TUBB2AQ13885 445 aa21.31■■□□□ 1
VRK2-205ENST00000432057 NEDD9Q14511 834 aa21.31■■□□□ 1
VRK2-205ENST00000432057 SLC18A3Q16572 532 aa21.31■■□□□ 1
VRK2-205ENST00000432057 LY6KQ17RY6 165 aa21.31■■□□□ 1
VRK2-205ENST00000432057 TEX35Q5T0J7 233 aa21.31■■□□□ 1
VRK2-205ENST00000432057 SLC39A4Q6P5W5 647 aa21.31■■□□□ 1
VRK2-205ENST00000432057 TUBB2BQ9BVA1 445 aa21.31■■□□□ 1
VRK2-205ENST00000432057 PUF60Q9UHX1 559 aaKnown RBP21.31■■□□□ 1
VRK2-205ENST00000432057 CAPN6Q9Y6Q1 641 aa21.31■■□□□ 1
VRK2-205ENST00000432057 DNAJC25-GNG10A0A024R161 153 aa21.3■■□□□ 1
VRK2-205ENST00000432057 ARIH2O95376 493 aa21.3■■□□□ 1
VRK2-205ENST00000432057 MOCS3O95396 460 aa21.3■■□□□ 1
VRK2-205ENST00000432057 CYP2C8P10632 490 aa21.3■■□□□ 1
VRK2-205ENST00000432057 ERVK-9P63128 1117 aa21.3■■□□□ 1
VRK2-205ENST00000432057 PTK2Q05397 1052 aa21.3■■□□□ 1
VRK2-205ENST00000432057 C1orf220Q5T0J3 134 aa21.3■■□□□ 1
VRK2-205ENST00000432057 RSRC2Q7L4I2 434 aaKnown RBP21.3■■□□□ 1
VRK2-205ENST00000432057 ZNF571Q7Z3V5 609 aaPredicted RBP21.3■■□□□ 1
VRK2-205ENST00000432057 SRGAP1Q7Z6B7 1085 aa21.3■■□□□ 1
VRK2-205ENST00000432057 SAAL1Q96ER3 474 aa21.3■■□□□ 1
VRK2-205ENST00000432057 IFT74Q96LB3 600 aa21.3■■□□□ 1
VRK2-205ENST00000432057 MAPK13O15264 365 aa21.3■■□□□ 1
VRK2-205ENST00000432057 PPP3CAQ08209 521 aa21.3■■□□□ 1
VRK2-205ENST00000432057 FBXO38Q6PIJ6 1188 aa21.3■■□□□ 1
VRK2-205ENST00000432057 TRAPPC11Q7Z392 1133 aa21.3■■□□□ 1
VRK2-205ENST00000432057 ANKRD13CQ8N6S4 541 aa21.3■■□□□ 1
VRK2-205ENST00000432057 MPHOSPH6Q99547 160 aaKnown RBP21.3■■□□□ 1
VRK2-205ENST00000432057 CNGA1P29973 690 aa21.29■■□□□ 1
VRK2-205ENST00000432057 PRKCIP41743 596 aa21.29■■□□□ 1
VRK2-205ENST00000432057 TAS1R3Q7RTX0 852 aa21.29■■□□□ 1
VRK2-205ENST00000432057 CBWD2Q8IUF1 395 aa21.29■■□□□ 1
VRK2-205ENST00000432057 CEP112Q8N8E3 955 aa21.29■■□□□ 1
VRK2-205ENST00000432057 GOLGA1Q92805 767 aa21.29■■□□□ 1
VRK2-205ENST00000432057 TMEM143Q96AN5 459 aa21.29■■□□□ 1
VRK2-205ENST00000432057 MROH8Q9H579 483 aa21.29■■□□□ 1
VRK2-205ENST00000432057 ADAMTS1Q9UHI8 967 aa21.29■■□□□ 1
VRK2-205ENST00000432057 SALL4Q9UJQ4 1053 aa21.29■■□□□ 1
VRK2-205ENST00000432057 DNAJC12Q9UKB3 198 aa21.29■■□□□ 1
VRK2-205ENST00000432057 TGFB3P10600 412 aa21.28■■□□□ 1
VRK2-205ENST00000432057 TCF7P36402 384 aaPredicted RBP21.28■■□□□ 1
VRK2-205ENST00000432057 GCLMP48507 274 aa21.28■■□□□ 1
VRK2-205ENST00000432057 WHAMMP3Q1A5X7 153 aa21.28■■□□□ 1
VRK2-205ENST00000432057 METTL7BQ6UX53 244 aa21.28■■□□□ 1
VRK2-205ENST00000432057 FBXO16Q8IX29 292 aaPredicted RBP21.28■■□□□ 1
VRK2-205ENST00000432057 TXLNBQ8N3L3 684 aa21.28■■□□□ 1
VRK2-205ENST00000432057 CEP89Q96ST8 783 aa21.28■■□□□ 1
VRK2-205ENST00000432057 PORCNQ9H237 461 aa21.28■■□□□ 1
VRK2-205ENST00000432057 DHX33Q9H6R0 707 aaKnown RBP21.28■■□□□ 1
VRK2-205ENST00000432057 ARHGAP28Q9P2N2 729 aa21.28■■□□□ 1
VRK2-205ENST00000432057 APEX2Q9UBZ4 518 aa21.28■■□□□ 1
VRK2-205ENST00000432057 F8VZ95 297 aa21.28■■□□□ 1
VRK2-205ENST00000432057 RRP9O43818 475 aaKnown RBP21.28■■□□□ 1
VRK2-205ENST00000432057 TACC1O75410 805 aa21.28■■□□□ 1
VRK2-205ENST00000432057 GFPT2O94808 682 aa21.28■■□□□ 1
VRK2-205ENST00000432057 CHMP4BP1P59074 171 aa21.28■■□□□ 1
VRK2-205ENST00000432057 MKRN3Q13064 507 aaKnown RBP21.28■■□□□ 1
VRK2-205ENST00000432057 SNRNP35Q16560 246 aaKnown RBP21.28■■□□□ 1
VRK2-205ENST00000432057 FAM160B1Q5W0V3 765 aa21.28■■□□□ 1
VRK2-205ENST00000432057 PAPD7Q5XG87 772 aaKnown RBP21.28■■□□□ 1
VRK2-205ENST00000432057 TRIM58Q8NG06 486 aa21.28■■□□□ 1
VRK2-205ENST00000432057 LMO3Q8TAP4 145 aa21.28■■□□□ 1
VRK2-205ENST00000432057 ASAP3Q8TDY4 903 aa21.28■■□□□ 1
VRK2-205ENST00000432057 NIFKQ9BYG3 293 aaKnown RBP21.28■■□□□ 1
VRK2-205ENST00000432057 EPC1Q9H2F5 836 aa21.28■■□□□ 1
VRK2-205ENST00000432057 EFCC1Q9HA90 598 aa21.28■■□□□ 1
VRK2-205ENST00000432057 DDX41Q9UJV9 622 aaKnown RBP21.28■■□□□ 1
VRK2-205ENST00000432057 PNMA3Q9UL41 463 aa21.28■■□□□ 1
VRK2-205ENST00000432057 BZW2Q9Y6E2 419 aaKnown RBP21.28■■□□□ 1
VRK2-205ENST00000432057 ANO9A1A5B4 782 aa21.27■■□□□ 1
VRK2-205ENST00000432057 HNRNPDLO14979 420 aaKnown RBP21.27■■□□□ 1
VRK2-205ENST00000432057 N4BP1O75113 896 aaKnown RBP21.27■■□□□ 1
VRK2-205ENST00000432057 STAT1P42224 750 aa21.27■■□□□ 1
VRK2-205ENST00000432057 HSP90AA2PQ14568 343 aaPredicted RBP21.27■■□□□ 1
VRK2-205ENST00000432057 PACSIN1Q9BY11 444 aa21.27■■□□□ 1
VRK2-205ENST00000432057 STK33Q9BYT3 514 aa21.27■■□□□ 1
VRK2-205ENST00000432057 GPR88Q9GZN0 384 aa21.27■■□□□ 1
VRK2-205ENST00000432057 LUC7LQ9NQ29 371 aaKnown RBP21.27■■□□□ 1
VRK2-205ENST00000432057 FERP16591 822 aa21.26■□□□□ 0.99
VRK2-205ENST00000432057 SOX5P35711 763 aa21.26■□□□□ 0.99
VRK2-205ENST00000432057 STAT5BP51692 787 aa21.26■□□□□ 0.99
VRK2-205ENST00000432057 DRAP1Q14919 205 aaPredicted RBP21.26■□□□□ 0.99
VRK2-205ENST00000432057 EPC2Q52LR7 807 aa21.26■□□□□ 0.99
VRK2-205ENST00000432057 SHCBP1Q8NEM2 672 aa21.26■□□□□ 0.99
VRK2-205ENST00000432057 AFAP1L1Q8TED9 768 aa21.26■□□□□ 0.99
VRK2-205ENST00000432057 SEPT1Q8WYJ6 367 aa21.26■□□□□ 0.99
VRK2-205ENST00000432057 POMGNT1Q8WZA1 660 aa21.26■□□□□ 0.99
VRK2-205ENST00000432057 BICD1Q96G01 975 aa21.26■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms