RNA–Protein interactions for RNA: ENST00000431918.1

CLDN4-202, Transcript of claudin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CLDN4, Length 4,108 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4-202ENST00000431918 TLR10Q9BXR5 811 aa12.34□□□□□ -0.43
CLDN4-202ENST00000431918 AZI2Q9H6S1 392 aa12.34□□□□□ -0.43
CLDN4-202ENST00000431918 OLFML3Q9NRN5 406 aa12.34□□□□□ -0.43
CLDN4-202ENST00000431918 APEX2Q9UBZ4 518 aa12.34□□□□□ -0.43
CLDN4-202ENST00000431918 RRP15Q9Y3B9 282 aaKnown RBP12.34□□□□□ -0.43
CLDN4-202ENST00000431918 MYH10P35580 1976 aa12.34□□□□□ -0.43
CLDN4-202ENST00000431918 LAMB2P55268 1798 aa12.33□□□□□ -0.44
CLDN4-202ENST00000431918 ZSCAN5CA6NGD5 496 aaPredicted RBP12.33□□□□□ -0.44
CLDN4-202ENST00000431918 EIF3DO15371 548 aaKnown RBP eCLIP12.33□□□□□ -0.44
CLDN4-202ENST00000431918 CTNND1O60716 968 aaKnown RBP12.33□□□□□ -0.44
CLDN4-202ENST00000431918 FTLP02792 175 aaPredicted RBP12.33□□□□□ -0.44
CLDN4-202ENST00000431918 PSAPP07602 524 aa12.33□□□□□ -0.44
CLDN4-202ENST00000431918 VPS41P49754 854 aa12.33□□□□□ -0.44
CLDN4-202ENST00000431918 SPIRE1Q08AE8 756 aa12.33□□□□□ -0.44
CLDN4-202ENST00000431918 CBWD6Q4V339 395 aa12.33□□□□□ -0.44
CLDN4-202ENST00000431918 CBWD3Q5JTY5 395 aa12.33□□□□□ -0.44
CLDN4-202ENST00000431918 CBWD5Q5RIA9 395 aa12.33□□□□□ -0.44
CLDN4-202ENST00000431918 PPP1R9AQ9ULJ8 1098 aa12.33□□□□□ -0.44
CLDN4-202ENST00000431918 ECM29Q5VYK3 1845 aa12.33□□□□□ -0.44
CLDN4-202ENST00000431918 IGLV3-22A0A075B6J6 115 aa12.33□□□□□ -0.44
CLDN4-202ENST00000431918 PIK3CDO00329 1044 aa12.33□□□□□ -0.44
CLDN4-202ENST00000431918 NOL4O94818 638 aa12.33□□□□□ -0.44
CLDN4-202ENST00000431918 KIF4AO95239 1232 aa12.33□□□□□ -0.44
CLDN4-202ENST00000431918 PSEN1P49768 467 aa12.33□□□□□ -0.44
CLDN4-202ENST00000431918 PPP2R5CQ13362 524 aa12.33□□□□□ -0.44
CLDN4-202ENST00000431918 PPP1R7Q15435 360 aa12.33□□□□□ -0.44
CLDN4-202ENST00000431918 COBLL1Q53SF7 1204 aa12.33□□□□□ -0.44
CLDN4-202ENST00000431918 C10orf76Q5T2E6 689 aa12.33□□□□□ -0.44
CLDN4-202ENST00000431918 METTL13Q8N6R0 699 aa12.33□□□□□ -0.44
CLDN4-202ENST00000431918 SLC7A3Q8WY07 619 aa12.33□□□□□ -0.44
CLDN4-202ENST00000431918 TMEM143Q96AN5 459 aa12.33□□□□□ -0.44
CLDN4-202ENST00000431918 PPP1R16BQ96T49 567 aa12.33□□□□□ -0.44
CLDN4-202ENST00000431918 POP1Q99575 1024 aaKnown RBP12.33□□□□□ -0.44
CLDN4-202ENST00000431918 COL20A1Q9P218 1284 aa12.33□□□□□ -0.44
CLDN4-202ENST00000431918 FOXN3O00409 490 aaPredicted RBP12.33□□□□□ -0.44
CLDN4-202ENST00000431918 CYP26A1O43174 497 aa12.33□□□□□ -0.44
CLDN4-202ENST00000431918 TGFB1I1O43294 461 aa12.33□□□□□ -0.44
CLDN4-202ENST00000431918 ATP9AO75110 1047 aa12.33□□□□□ -0.44
CLDN4-202ENST00000431918 PLS3P13797 630 aa12.33□□□□□ -0.44
CLDN4-202ENST00000431918 GUCY2CP25092 1073 aa12.33□□□□□ -0.44
CLDN4-202ENST00000431918 RARRES1P49788 294 aa12.33□□□□□ -0.44
CLDN4-202ENST00000431918 MMP14P50281 582 aa12.33□□□□□ -0.44
CLDN4-202ENST00000431918 MFAP3P55082 362 aa12.33□□□□□ -0.44
CLDN4-202ENST00000431918 CBWD2Q8IUF1 395 aa12.33□□□□□ -0.44
CLDN4-202ENST00000431918 CCDC105Q8IYK2 499 aa12.33□□□□□ -0.44
CLDN4-202ENST00000431918 PDCD2LQ9BRP1 358 aa12.33□□□□□ -0.44
CLDN4-202ENST00000431918 STK33Q9BYT3 514 aa12.33□□□□□ -0.44
CLDN4-202ENST00000431918 NHSQ6T4R5 1651 aa12.32□□□□□ -0.44
CLDN4-202ENST00000431918 H0YHG0 523 aa12.32□□□□□ -0.44
CLDN4-202ENST00000431918 ATMINO43313 823 aaPredicted RBP12.32□□□□□ -0.44
CLDN4-202ENST00000431918 FECHP22830 423 aa12.32□□□□□ -0.44
CLDN4-202ENST00000431918 NF2P35240 595 aa12.32□□□□□ -0.44
CLDN4-202ENST00000431918 OSTNP61366 133 aa12.32□□□□□ -0.44
CLDN4-202ENST00000431918 MKRN4PQ13434 485 aaPredicted RBP12.32□□□□□ -0.44
CLDN4-202ENST00000431918 ZBTB33Q86T24 672 aa12.32□□□□□ -0.44
CLDN4-202ENST00000431918 CCDC114Q96M63 670 aa12.32□□□□□ -0.44
CLDN4-202ENST00000431918 AGO4Q9HCK5 861 aaKnown RBP12.32□□□□□ -0.44
CLDN4-202ENST00000431918 OSGEPQ9NPF4 335 aa12.32□□□□□ -0.44
CLDN4-202ENST00000431918 PTPN22Q9Y2R2 807 aa12.32□□□□□ -0.44
CLDN4-202ENST00000431918 SLC26A4O43511 780 aa12.32□□□□□ -0.44
CLDN4-202ENST00000431918 MAP2K2P36507 400 aa12.32□□□□□ -0.44
CLDN4-202ENST00000431918 CARSP49589 748 aaKnown RBP12.32□□□□□ -0.44
CLDN4-202ENST00000431918 IGBP1P78318 339 aa12.32□□□□□ -0.44
CLDN4-202ENST00000431918 SUPT20HL1Q3ZLR7 823 aa12.32□□□□□ -0.44
CLDN4-202ENST00000431918 EPC2Q52LR7 807 aa12.32□□□□□ -0.44
CLDN4-202ENST00000431918 EAPPQ56P03 285 aaPredicted RBP12.32□□□□□ -0.44
CLDN4-202ENST00000431918 CREG2Q8IUH2 290 aa12.32□□□□□ -0.44
CLDN4-202ENST00000431918 C7orf43Q8WVR3 580 aa12.32□□□□□ -0.44
CLDN4-202ENST00000431918 SYN2Q92777 582 aaPredicted RBP12.32□□□□□ -0.44
CLDN4-202ENST00000431918 FAM84AQ96KN4 292 aa12.32□□□□□ -0.44
CLDN4-202ENST00000431918 PI4K2AQ9BTU6 479 aa12.32□□□□□ -0.44
CLDN4-202ENST00000431918 AMACRQ9UHK6 382 aa12.32□□□□□ -0.44
CLDN4-202ENST00000431918 RASAL2Q9UJF2 1139 aa12.32□□□□□ -0.44
CLDN4-202ENST00000431918 WNK3Q9BYP7 1800 aa12.32□□□□□ -0.44
CLDN4-202ENST00000431918 SRGAP2CP0DJJ0 459 aa12.32□□□□□ -0.44
CLDN4-202ENST00000431918 PIK3CAP42336 1068 aa12.32□□□□□ -0.44
CLDN4-202ENST00000431918 DDX42Q86XP3 938 aaKnown RBP eCLIP12.32□□□□□ -0.44
CLDN4-202ENST00000431918 SLC35G2Q8TBE7 412 aa12.32□□□□□ -0.44
CLDN4-202ENST00000431918 JPH1Q9HDC5 661 aaPredicted RBP12.32□□□□□ -0.44
CLDN4-202ENST00000431918 WRAP73Q9P2S5 460 aaPredicted RBP12.32□□□□□ -0.44
CLDN4-202ENST00000431918 RNF14Q9UBS8 474 aa12.32□□□□□ -0.44
CLDN4-202ENST00000431918 KRT19P08727 400 aa12.31□□□□□ -0.44
CLDN4-202ENST00000431918 CTNNA1P35221 906 aaKnown RBP12.31□□□□□ -0.44
CLDN4-202ENST00000431918 COPB2P35606 906 aa12.31□□□□□ -0.44
CLDN4-202ENST00000431918 PPFIA1Q13136 1202 aa12.31□□□□□ -0.44
CLDN4-202ENST00000431918 MIS18BP1Q6P0N0 1132 aa12.31□□□□□ -0.44
CLDN4-202ENST00000431918 DCPSQ96C86 337 aaKnown RBP12.31□□□□□ -0.44
CLDN4-202ENST00000431918 GANQ9H2C0 597 aa12.31□□□□□ -0.44
CLDN4-202ENST00000431918 ACAD9Q9H845 621 aa12.31□□□□□ -0.44
CLDN4-202ENST00000431918 MTUS1Q9ULD2 1270 aa12.31□□□□□ -0.44
CLDN4-202ENST00000431918 NOC2LQ9Y3T9 749 aaKnown RBP12.31□□□□□ -0.44
CLDN4-202ENST00000431918 GRID2IPA4D2P6 1211 aa12.31□□□□□ -0.44
CLDN4-202ENST00000431918 ANKRD65E5RJM6 399 aa12.31□□□□□ -0.44
CLDN4-202ENST00000431918 K7ERI5 159 aa12.31□□□□□ -0.44
CLDN4-202ENST00000431918 ACOT2P49753 483 aa12.31□□□□□ -0.44
CLDN4-202ENST00000431918 BACE1P56817 501 aa12.31□□□□□ -0.44
CLDN4-202ENST00000431918 DLG4P78352 724 aa12.31□□□□□ -0.44
CLDN4-202ENST00000431918 PGM5Q15124 567 aa12.31□□□□□ -0.44
CLDN4-202ENST00000431918 SNRNP35Q16560 246 aaKnown RBP12.31□□□□□ -0.44
CLDN4-202ENST00000431918 HGSNATQ68CP4 663 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms