RNA–Protein interactions for RNA: ENST00000431460.1

TRERNA1-201, translation regulatory long non-coding RNA 1, humanhuman

TSL 2 BASIC

Gene TRERNA1, Length 462 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRERNA1-201ENST00000431460 PIN4Q9Y237 131 aaKnown RBP13.23□□□□□ -0.29
TRERNA1-201ENST00000431460 VCANP13611 3396 aa13.23□□□□□ -0.29
TRERNA1-201ENST00000431460 ARID2Q68CP9 1835 aa13.23□□□□□ -0.29
TRERNA1-201ENST00000431460 SPTBN5Q9NRC6 3674 aaKnown RBP13.22□□□□□ -0.29
TRERNA1-201ENST00000431460 GRM6O15303 877 aa13.22□□□□□ -0.29
TRERNA1-201ENST00000431460 USO1O60763 962 aaKnown RBP13.22□□□□□ -0.29
TRERNA1-201ENST00000431460 UBA7P41226 1012 aa13.22□□□□□ -0.29
TRERNA1-201ENST00000431460 LAMTOR4Q0VGL1 99 aa13.22□□□□□ -0.29
TRERNA1-201ENST00000431460 TJAP1Q5JTD0 557 aa13.22□□□□□ -0.29
TRERNA1-201ENST00000431460 TWF2Q6IBS0 349 aaKnown RBP13.22□□□□□ -0.29
TRERNA1-201ENST00000431460 POTEGQ6S5H5 508 aa13.22□□□□□ -0.29
TRERNA1-201ENST00000431460 EP400NLQ6ZTU2 488 aa13.22□□□□□ -0.29
TRERNA1-201ENST00000431460 EXOC8Q8IYI6 725 aa13.22□□□□□ -0.29
TRERNA1-201ENST00000431460 ZNF710Q8N1W2 664 aa13.22□□□□□ -0.29
TRERNA1-201ENST00000431460 MRPL38Q96DV4 380 aaKnown RBP13.22□□□□□ -0.29
TRERNA1-201ENST00000431460 CLIC6Q96NY7 704 aa13.22□□□□□ -0.29
TRERNA1-201ENST00000431460 C11orf84Q9BUA3 381 aaPredicted RBP13.22□□□□□ -0.29
TRERNA1-201ENST00000431460 CCSER1Q9C0I3 900 aa13.22□□□□□ -0.29
TRERNA1-201ENST00000431460 TMEM161AQ9NX61 479 aa13.22□□□□□ -0.29
TRERNA1-201ENST00000431460 DBR1Q9UK59 544 aaKnown RBP13.22□□□□□ -0.29
TRERNA1-201ENST00000431460 RWDD3Q9Y3V2 267 aa13.22□□□□□ -0.29
TRERNA1-201ENST00000431460 RALGAPA2Q2PPJ7 1873 aa13.22□□□□□ -0.29
TRERNA1-201ENST00000431460 XIRP2A4UGR9 3374 aa13.22□□□□□ -0.29
TRERNA1-201ENST00000431460 KIAA1671Q9BY89 1806 aa13.21□□□□□ -0.29
TRERNA1-201ENST00000431460 CUTAO60888 179 aa13.21□□□□□ -0.29
TRERNA1-201ENST00000431460 NCLP19338 710 aaKnown RBP13.21□□□□□ -0.29
TRERNA1-201ENST00000431460 KCNQ1P51787 676 aa13.21□□□□□ -0.29
TRERNA1-201ENST00000431460 MRPS5P82675 430 aaKnown RBP13.21□□□□□ -0.29
TRERNA1-201ENST00000431460 CDC42EP1Q00587 391 aa13.21□□□□□ -0.29
TRERNA1-201ENST00000431460 ECM1Q16610 540 aa13.21□□□□□ -0.29
TRERNA1-201ENST00000431460 CABP7Q86V35 215 aa13.21□□□□□ -0.29
TRERNA1-201ENST00000431460 ECHDC2Q86YB7 292 aa13.21□□□□□ -0.29
TRERNA1-201ENST00000431460 ABI1Q8IZP0 508 aa13.21□□□□□ -0.29
TRERNA1-201ENST00000431460 RNF149Q8NC42 400 aa13.21□□□□□ -0.29
TRERNA1-201ENST00000431460 LEO1Q8WVC0 666 aaPredicted RBP13.21□□□□□ -0.29
TRERNA1-201ENST00000431460 ATXN2LQ8WWM7 1075 aaKnown RBP13.21□□□□□ -0.29
TRERNA1-201ENST00000431460 TCP11Q8WWU5 503 aa13.21□□□□□ -0.29
TRERNA1-201ENST00000431460 CLP1Q92989 425 aaKnown RBP13.21□□□□□ -0.29
TRERNA1-201ENST00000431460 HLA-CQ95604 372 aa13.21□□□□□ -0.29
TRERNA1-201ENST00000431460 SPATA32Q96LK8 384 aa13.21□□□□□ -0.29
TRERNA1-201ENST00000431460 ASB2Q96Q27 587 aa13.21□□□□□ -0.29
TRERNA1-201ENST00000431460 NT5C3AQ9H0P0 336 aa13.21□□□□□ -0.29
TRERNA1-201ENST00000431460 XPNPEP1Q9NQW7 623 aa13.21□□□□□ -0.29
TRERNA1-201ENST00000431460 DDX19AQ9NUU7 478 aaKnown RBP13.21□□□□□ -0.29
TRERNA1-201ENST00000431460 RNF216Q9NWF9 866 aaPredicted RBP13.21□□□□□ -0.29
TRERNA1-201ENST00000431460 LMCD1Q9NZU5 365 aa13.21□□□□□ -0.29
TRERNA1-201ENST00000431460 KIAA1024Q9UPX6 916 aa13.21□□□□□ -0.29
TRERNA1-201ENST00000431460 DNM3Q9UQ16 869 aa13.21□□□□□ -0.29
TRERNA1-201ENST00000431460 C5orf67F2Z3F1 127 aa13.2□□□□□ -0.3
TRERNA1-201ENST00000431460 ME1P48163 572 aa13.2□□□□□ -0.3
TRERNA1-201ENST00000431460 RARRES1P49788 294 aa13.2□□□□□ -0.3
TRERNA1-201ENST00000431460 TIGD5Q53EQ6 642 aa13.2□□□□□ -0.3
TRERNA1-201ENST00000431460 TCEAL5Q5H9L2 206 aa13.2□□□□□ -0.3
TRERNA1-201ENST00000431460 AXDND1Q5T1B0 1012 aaPredicted RBP13.2□□□□□ -0.3
TRERNA1-201ENST00000431460 KLHL23Q8NBE8 558 aa13.2□□□□□ -0.3
TRERNA1-201ENST00000431460 HELQQ8TDG4 1101 aa13.2□□□□□ -0.3
TRERNA1-201ENST00000431460 LPPQ93052 612 aa13.2□□□□□ -0.3
TRERNA1-201ENST00000431460 CALML4Q96GE6 196 aa13.2□□□□□ -0.3
TRERNA1-201ENST00000431460 EPSTI1Q96J88 318 aa13.2□□□□□ -0.3
TRERNA1-201ENST00000431460 CHAMP1Q96JM3 812 aa13.2□□□□□ -0.3
TRERNA1-201ENST00000431460 PNMA5Q96PV4 448 aa13.2□□□□□ -0.3
TRERNA1-201ENST00000431460 INO80BQ9C086 356 aaPredicted RBP13.2□□□□□ -0.3
TRERNA1-201ENST00000431460 POLR3FQ9H1D9 316 aaPredicted RBP13.2□□□□□ -0.3
TRERNA1-201ENST00000431460 MINDY3Q9H8M7 445 aa13.2□□□□□ -0.3
TRERNA1-201ENST00000431460 IFT122Q9HBG6 1241 aa13.2□□□□□ -0.3
TRERNA1-201ENST00000431460 GPRC5CQ9NQ84 441 aa13.2□□□□□ -0.3
TRERNA1-201ENST00000431460 TYW1Q9NV66 732 aaKnown RBP13.2□□□□□ -0.3
TRERNA1-201ENST00000431460 DACT1Q9NYF0 836 aa13.2□□□□□ -0.3
TRERNA1-201ENST00000431460 PCDHA7Q9UN72 937 aa13.2□□□□□ -0.3
TRERNA1-201ENST00000431460 GAS2O43903 313 aaKnown RBP13.19□□□□□ -0.3
TRERNA1-201ENST00000431460 EYA4O95677 639 aa13.19□□□□□ -0.3
TRERNA1-201ENST00000431460 ITGB1P05556 798 aa13.19□□□□□ -0.3
TRERNA1-201ENST00000431460 RB1P06400 928 aa13.19□□□□□ -0.3
TRERNA1-201ENST00000431460 ATF7P17544 494 aaPredicted RBP13.19□□□□□ -0.3
TRERNA1-201ENST00000431460 TXLNAP40222 546 aa13.19□□□□□ -0.3
TRERNA1-201ENST00000431460 PBX3P40426 434 aa13.19□□□□□ -0.3
TRERNA1-201ENST00000431460 PHKA2P46019 1235 aa13.19□□□□□ -0.3
TRERNA1-201ENST00000431460 FAM189BP81408 668 aa13.19□□□□□ -0.3
TRERNA1-201ENST00000431460 TMEM119Q4V9L6 283 aa13.19□□□□□ -0.3
TRERNA1-201ENST00000431460 CLLU1OSQ5K130 101 aa13.19□□□□□ -0.3
TRERNA1-201ENST00000431460 SPECC1Q5M775 1068 aa13.19□□□□□ -0.3
TRERNA1-201ENST00000431460 USP49Q70CQ1 688 aa13.19□□□□□ -0.3
TRERNA1-201ENST00000431460 ASAP3Q8TDY4 903 aa13.19□□□□□ -0.3
TRERNA1-201ENST00000431460 SYMPKQ92797 1274 aaKnown RBP13.19□□□□□ -0.3
TRERNA1-201ENST00000431460 CDK5RAP3Q96JB5 506 aa13.19□□□□□ -0.3
TRERNA1-201ENST00000431460 PLVAPQ9BX97 442 aa13.19□□□□□ -0.3
TRERNA1-201ENST00000431460 TMEM117Q9H0C3 514 aa13.19□□□□□ -0.3
TRERNA1-201ENST00000431460 NSUN3Q9H649 340 aaKnown RBP13.19□□□□□ -0.3
TRERNA1-201ENST00000431460 ELAC1Q9H777 363 aaKnown RBP13.19□□□□□ -0.3
TRERNA1-201ENST00000431460 RNF19AQ9NV58 838 aa13.19□□□□□ -0.3
TRERNA1-201ENST00000431460 PLAGL2Q9UPG8 496 aa13.19□□□□□ -0.3
TRERNA1-201ENST00000431460 INPP5FQ9Y2H2 1132 aa13.19□□□□□ -0.3
TRERNA1-201ENST00000431460 A0A0U1RQF3 1178 aa13.18□□□□□ -0.3
TRERNA1-201ENST00000431460 ARHGEF35A5YM69 484 aa13.18□□□□□ -0.3
TRERNA1-201ENST00000431460 INO80B-WBP1J3KQ70 363 aa13.18□□□□□ -0.3
TRERNA1-201ENST00000431460 HOXA2O43364 376 aa13.18□□□□□ -0.3
TRERNA1-201ENST00000431460 DGAT1O75907 488 aa13.18□□□□□ -0.3
TRERNA1-201ENST00000431460 ERLIN2O94905 339 aa13.18□□□□□ -0.3
TRERNA1-201ENST00000431460 KCNA5P22460 613 aa13.18□□□□□ -0.3
TRERNA1-201ENST00000431460 DNAJB1P25685 340 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms