RNA–Protein interactions for RNA: ENST00000431429.1

HMGB1P27-201, Transcript of high mobility group box 1 pseudogene 27, humanhuman

BASIC

Gene HMGB1P27, Length 603 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P27-201ENST00000431429 KLHL18O94889 574 aa4.07□□□□□ -1.76
HMGB1P27-201ENST00000431429 PLA2G1BP04054 148 aaKnown RBP4.07□□□□□ -1.76
HMGB1P27-201ENST00000431429 SLC16A1P53985 500 aa4.07□□□□□ -1.76
HMGB1P27-201ENST00000431429 EPHB3P54753 998 aa4.07□□□□□ -1.76
HMGB1P27-201ENST00000431429 CDK17Q00537 523 aa4.07□□□□□ -1.76
HMGB1P27-201ENST00000431429 CAP1Q01518 475 aa4.07□□□□□ -1.76
HMGB1P27-201ENST00000431429 TOP3AQ13472 1001 aaPredicted RBP4.07□□□□□ -1.76
HMGB1P27-201ENST00000431429 SEPT2Q15019 361 aa4.07□□□□□ -1.76
HMGB1P27-201ENST00000431429 EIF4HQ15056 248 aaKnown RBP4.07□□□□□ -1.76
HMGB1P27-201ENST00000431429 ZNF827Q17R98 1081 aa4.07□□□□□ -1.76
HMGB1P27-201ENST00000431429 ARHGAP29Q52LW3 1261 aa4.07□□□□□ -1.76
HMGB1P27-201ENST00000431429 MUM1L1Q5H9M0 696 aa4.07□□□□□ -1.76
HMGB1P27-201ENST00000431429 SYCP2LQ5T4T6 812 aa4.07□□□□□ -1.76
HMGB1P27-201ENST00000431429 PHF19Q5T6S3 580 aa4.07□□□□□ -1.76
HMGB1P27-201ENST00000431429 TRIM68Q6AZZ1 485 aa4.07□□□□□ -1.76
HMGB1P27-201ENST00000431429 GRAMD4Q6IC98 578 aa4.07□□□□□ -1.76
HMGB1P27-201ENST00000431429 TMEFF1Q8IYR6 380 aa4.07□□□□□ -1.76
HMGB1P27-201ENST00000431429 STPG3Q8N7X2 389 aa4.07□□□□□ -1.76
HMGB1P27-201ENST00000431429 TTLL6Q8N841 843 aa4.07□□□□□ -1.76
HMGB1P27-201ENST00000431429 ABCF1Q8NE71 845 aaKnown RBP eCLIP4.07□□□□□ -1.76
HMGB1P27-201ENST00000431429 ZCCHC14Q8WYQ9 949 aaKnown RBP4.07□□□□□ -1.76
HMGB1P27-201ENST00000431429 FAM168AQ92567 244 aa4.07□□□□□ -1.76
HMGB1P27-201ENST00000431429 TTC17Q96AE7 1141 aa4.07□□□□□ -1.76
HMGB1P27-201ENST00000431429 RPS6KC1Q96S38 1066 aa4.07□□□□□ -1.76
HMGB1P27-201ENST00000431429 DMRTA2Q96SC8 542 aa4.07□□□□□ -1.76
HMGB1P27-201ENST00000431429 PTPN18Q99952 460 aa4.07□□□□□ -1.76
HMGB1P27-201ENST00000431429 MAN1C1Q9NR34 630 aa4.07□□□□□ -1.76
HMGB1P27-201ENST00000431429 POLR3BQ9NW08 1133 aaPredicted RBP4.07□□□□□ -1.76
HMGB1P27-201ENST00000431429 FBXO10Q9UK96 956 aa4.07□□□□□ -1.76
HMGB1P27-201ENST00000431429 SYNPO2Q9UMS6 1093 aa4.07□□□□□ -1.76
HMGB1P27-201ENST00000431429 USP18Q9UMW8 372 aa4.07□□□□□ -1.76
HMGB1P27-201ENST00000431429 A0A0G2JNJ9 132 aa4.06□□□□□ -1.76
HMGB1P27-201ENST00000431429 APAF1O14727 1248 aa4.06□□□□□ -1.76
HMGB1P27-201ENST00000431429 B3GALT2O43825 422 aa4.06□□□□□ -1.76
HMGB1P27-201ENST00000431429 PLIN1O60240 522 aa4.06□□□□□ -1.76
HMGB1P27-201ENST00000431429 LY86O95711 162 aa4.06□□□□□ -1.76
HMGB1P27-201ENST00000431429 SLC5A1P13866 664 aa4.06□□□□□ -1.76
HMGB1P27-201ENST00000431429 ZNF28P17035 718 aa4.06□□□□□ -1.76
HMGB1P27-201ENST00000431429 PFKLP17858 780 aa4.06□□□□□ -1.76
HMGB1P27-201ENST00000431429 IL12RB1P42701 662 aa4.06□□□□□ -1.76
HMGB1P27-201ENST00000431429 HTR3AP46098 478 aa4.06□□□□□ -1.76
HMGB1P27-201ENST00000431429 SLC6A9P48067 706 aa4.06□□□□□ -1.76
HMGB1P27-201ENST00000431429 NCKAP1LP55160 1127 aa4.06□□□□□ -1.76
HMGB1P27-201ENST00000431429 MLLT6P55198 1093 aaPredicted RBP4.06□□□□□ -1.76
HMGB1P27-201ENST00000431429 ZNF280AP59817 542 aaPredicted RBP4.06□□□□□ -1.76
HMGB1P27-201ENST00000431429 FOXO4P98177 505 aa4.06□□□□□ -1.76
HMGB1P27-201ENST00000431429 MAP3K12Q12852 859 aa4.06□□□□□ -1.76
HMGB1P27-201ENST00000431429 HDAC1Q13547 482 aaPredicted RBP4.06□□□□□ -1.76
HMGB1P27-201ENST00000431429 PGS1Q32NB8 556 aa4.06□□□□□ -1.76
HMGB1P27-201ENST00000431429 UAP1L1Q3KQV9 507 aa4.06□□□□□ -1.76
HMGB1P27-201ENST00000431429 GJC2Q5T442 439 aaPredicted RBP4.06□□□□□ -1.76
HMGB1P27-201ENST00000431429 KLHDC10Q6PID8 442 aa4.06□□□□□ -1.76
HMGB1P27-201ENST00000431429 SLC4A10Q6U841 1118 aa4.06□□□□□ -1.76
HMGB1P27-201ENST00000431429 KSR2Q6VAB6 950 aa4.06□□□□□ -1.76
HMGB1P27-201ENST00000431429 PRR23BQ6ZRT6 265 aa4.06□□□□□ -1.76
HMGB1P27-201ENST00000431429 DENND1CQ8IV53 801 aa4.06□□□□□ -1.76
HMGB1P27-201ENST00000431429 GLB1L2Q8IW92 636 aa4.06□□□□□ -1.76
HMGB1P27-201ENST00000431429 UNC5BQ8IZJ1 945 aa4.06□□□□□ -1.76
HMGB1P27-201ENST00000431429 PPM1NQ8N819 430 aa4.06□□□□□ -1.76
HMGB1P27-201ENST00000431429 PIK3C3Q8NEB9 887 aa4.06□□□□□ -1.76
HMGB1P27-201ENST00000431429 PPP1R35Q8TAP8 253 aa4.06□□□□□ -1.76
HMGB1P27-201ENST00000431429 NSUN6Q8TEA1 469 aaKnown RBP4.06□□□□□ -1.76
HMGB1P27-201ENST00000431429 DYDC2Q96IM9 177 aa4.06□□□□□ -1.76
HMGB1P27-201ENST00000431429 CLIC6Q96NY7 704 aa4.06□□□□□ -1.76
HMGB1P27-201ENST00000431429 MAP3K14Q99558 947 aa4.06□□□□□ -1.76
HMGB1P27-201ENST00000431429 KATNBL1Q9H079 304 aa4.06□□□□□ -1.76
HMGB1P27-201ENST00000431429 EPB41L4AQ9HCS5 686 aaPredicted RBP4.06□□□□□ -1.76
HMGB1P27-201ENST00000431429 DMRT3Q9NQL9 472 aa4.06□□□□□ -1.76
HMGB1P27-201ENST00000431429 RBM12Q9NTZ6 932 aaKnown RBP4.06□□□□□ -1.76
HMGB1P27-201ENST00000431429 SPATA6Q9NWH7 488 aaPredicted RBP4.06□□□□□ -1.76
HMGB1P27-201ENST00000431429 Q9UFV3 132 aa4.06□□□□□ -1.76
HMGB1P27-201ENST00000431429 SAP30BPQ9UHR5 308 aaKnown RBP4.06□□□□□ -1.76
HMGB1P27-201ENST00000431429 L1RE1Q9UN81 338 aa4.06□□□□□ -1.76
HMGB1P27-201ENST00000431429 SIK3Q9Y2K2 1263 aa4.06□□□□□ -1.76
HMGB1P27-201ENST00000431429 CFAP20Q9Y6A4 193 aaKnown RBP4.06□□□□□ -1.76
HMGB1P27-201ENST00000431429 LOC102724159A0A0B4J2E5 919 aa4.05□□□□□ -1.76
HMGB1P27-201ENST00000431429 FAM227AF5H4B4 570 aa4.05□□□□□ -1.76
HMGB1P27-201ENST00000431429 SGTAO43765 313 aa4.05□□□□□ -1.76
HMGB1P27-201ENST00000431429 DTNBO60941 627 aa4.05□□□□□ -1.76
HMGB1P27-201ENST00000431429 UBXN7O94888 489 aa4.05□□□□□ -1.76
HMGB1P27-201ENST00000431429 ALDH2P05091 517 aa4.05□□□□□ -1.76
HMGB1P27-201ENST00000431429 GAAP10253 952 aa4.05□□□□□ -1.76
HMGB1P27-201ENST00000431429 CTSSP25774 331 aa4.05□□□□□ -1.76
HMGB1P27-201ENST00000431429 ETV4P43268 484 aa4.05□□□□□ -1.76
HMGB1P27-201ENST00000431429 GLRBP48167 497 aa4.05□□□□□ -1.76
HMGB1P27-201ENST00000431429 CCT2P78371 535 aaKnown RBP4.05□□□□□ -1.76
HMGB1P27-201ENST00000431429 CD69Q07108 199 aa4.05□□□□□ -1.76
HMGB1P27-201ENST00000431429 SEMA5AQ13591 1074 aa4.05□□□□□ -1.76
HMGB1P27-201ENST00000431429 PWP2Q15269 919 aaKnown RBP4.05□□□□□ -1.76
HMGB1P27-201ENST00000431429 SAFBQ15424 915 aaKnown RBP eCLIP4.05□□□□□ -1.76
HMGB1P27-201ENST00000431429 VPS72Q15906 364 aa4.05□□□□□ -1.76
HMGB1P27-201ENST00000431429 MST1LQ2TV78 715 aa4.05□□□□□ -1.76
HMGB1P27-201ENST00000431429 C19orf54Q5BKX5 351 aa4.05□□□□□ -1.76
HMGB1P27-201ENST00000431429 SWSAP1Q6NVH7 229 aa4.05□□□□□ -1.76
HMGB1P27-201ENST00000431429 Q6ZVL8 140 aa4.05□□□□□ -1.76
HMGB1P27-201ENST00000431429 LILRA3Q8N6C8 439 aaPredicted RBP4.05□□□□□ -1.76
HMGB1P27-201ENST00000431429 GPR156Q8NFN8 814 aa4.05□□□□□ -1.76
HMGB1P27-201ENST00000431429 DDX55Q8NHQ9 600 aaKnown RBP eCLIP4.05□□□□□ -1.76
HMGB1P27-201ENST00000431429 ZSWIM3Q96MP5 696 aa4.05□□□□□ -1.76
HMGB1P27-201ENST00000431429 STRBPQ96SI9 672 aaKnown RBP4.05□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms