RNA–Protein interactions for RNA: ENST00000429921.5

RPE-206, Transcript of ribulose-5-phosphate-3-epimerase, humanhuman

TSL 1 (best) BASIC

Gene RPE, Length 2,511 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPE-206ENST00000429921 TMEM161BQ8NDZ6 487 aa11.02□□□□□ -0.64
RPE-206ENST00000429921 NEK9Q8TD19 979 aa11.02□□□□□ -0.64
RPE-206ENST00000429921 PPP1R13LQ8WUF5 828 aa11.02□□□□□ -0.64
RPE-206ENST00000429921 HDAC7Q8WUI4 952 aa11.02□□□□□ -0.64
RPE-206ENST00000429921 SLC20A1Q8WUM9 679 aa11.02□□□□□ -0.64
RPE-206ENST00000429921 RABGGTAQ92696 567 aa11.02□□□□□ -0.64
RPE-206ENST00000429921 BICD1Q96G01 975 aa11.02□□□□□ -0.64
RPE-206ENST00000429921 ZBTB45Q96K62 511 aaPredicted RBP11.02□□□□□ -0.64
RPE-206ENST00000429921 PI4K2AQ9BTU6 479 aa11.02□□□□□ -0.64
RPE-206ENST00000429921 POLR3FQ9H1D9 316 aaPredicted RBP11.02□□□□□ -0.64
RPE-206ENST00000429921 ZCCHC17Q9NP64 241 aaKnown RBP11.02□□□□□ -0.64
RPE-206ENST00000429921 AIPL1Q9NZN9 384 aa11.02□□□□□ -0.64
RPE-206ENST00000429921 MYO1AQ9UBC5 1043 aa11.02□□□□□ -0.64
RPE-206ENST00000429921 TBX20Q9UMR3 447 aa11.02□□□□□ -0.64
RPE-206ENST00000429921 PAPPA2Q9BXP8 1791 aa11.02□□□□□ -0.64
RPE-206ENST00000429921 SPATA31C2B4DYI2 1134 aa11.02□□□□□ -0.65
RPE-206ENST00000429921 CLSTN1O94985 981 aa11.02□□□□□ -0.65
RPE-206ENST00000429921 LCA5LO95447 670 aa11.02□□□□□ -0.65
RPE-206ENST00000429921 PSAPP07602 524 aa11.02□□□□□ -0.65
RPE-206ENST00000429921 KRT13P13646 458 aa11.02□□□□□ -0.65
RPE-206ENST00000429921 SSTR3P32745 418 aaPredicted RBP11.02□□□□□ -0.65
RPE-206ENST00000429921 STXBP2Q15833 593 aa11.02□□□□□ -0.65
RPE-206ENST00000429921 GJC2Q5T442 439 aaPredicted RBP11.02□□□□□ -0.65
RPE-206ENST00000429921 PAPD7Q5XG87 772 aaKnown RBP11.02□□□□□ -0.65
RPE-206ENST00000429921 ABHD15Q6UXT9 468 aa11.02□□□□□ -0.65
RPE-206ENST00000429921 LBX2Q6XYB7 198 aa11.02□□□□□ -0.65
RPE-206ENST00000429921 LNX1Q8TBB1 728 aaPredicted RBP11.02□□□□□ -0.65
RPE-206ENST00000429921 OPTNQ96CV9 577 aa11.02□□□□□ -0.65
RPE-206ENST00000429921 GPRASP2Q96D09 838 aa11.02□□□□□ -0.65
RPE-206ENST00000429921 SPATC1LQ9H0A9 340 aa11.02□□□□□ -0.65
RPE-206ENST00000429921 ABCB6Q9NP58 842 aa11.02□□□□□ -0.65
RPE-206ENST00000429921 POTEB2H3BUK9 544 aa11.01□□□□□ -0.65
RPE-206ENST00000429921 DDX3XO00571 662 aaKnown RBP eCLIP11.01□□□□□ -0.656e-10■■■□□ 15.3
RPE-206ENST00000429921 POLR3GO15318 223 aaPredicted RBP11.01□□□□□ -0.65
RPE-206ENST00000429921 ARIH2O95376 493 aa11.01□□□□□ -0.65
RPE-206ENST00000429921 CNGA1P29973 690 aa11.01□□□□□ -0.65
RPE-206ENST00000429921 SFNP31947 248 aa11.01□□□□□ -0.65
RPE-206ENST00000429921 ALDH5A1P51649 535 aaPredicted RBP11.01□□□□□ -0.65
RPE-206ENST00000429921 WNT7BP56706 349 aa11.01□□□□□ -0.65
RPE-206ENST00000429921 WHAMMP3Q1A5X7 153 aa11.01□□□□□ -0.65
RPE-206ENST00000429921 NOL9Q5SY16 702 aaKnown RBP11.01□□□□□ -0.65
RPE-206ENST00000429921 POMGNT1Q8WZA1 660 aa11.01□□□□□ -0.65
RPE-206ENST00000429921 SEMA4DQ92854 862 aa11.01□□□□□ -0.65
RPE-206ENST00000429921 PPP1R16BQ96T49 567 aa11.01□□□□□ -0.65
RPE-206ENST00000429921 GPR88Q9GZN0 384 aa11.01□□□□□ -0.65
RPE-206ENST00000429921 CYP26B1Q9NR63 512 aa11.01□□□□□ -0.65
RPE-206ENST00000429921 KCND2Q9NZV8 630 aa11.01□□□□□ -0.65
RPE-206ENST00000429921 LCTP09848 1927 aa11.01□□□□□ -0.65
RPE-206ENST00000429921 SSU72P8A0A1W2PR75 194 aa11.01□□□□□ -0.65
RPE-206ENST00000429921 CNMDO75829 334 aa11.01□□□□□ -0.65
RPE-206ENST00000429921 GJB1P08034 283 aa11.01□□□□□ -0.65
RPE-206ENST00000429921 MUTP22033 750 aa11.01□□□□□ -0.65
RPE-206ENST00000429921 GYS2P54840 703 aa11.01□□□□□ -0.65
RPE-206ENST00000429921 JAM2P57087 298 aa11.01□□□□□ -0.65
RPE-206ENST00000429921 DMP1Q13316 513 aaPredicted RBP11.01□□□□□ -0.65
RPE-206ENST00000429921 ALKBH5Q6P6C2 394 aaKnown RBP11.01□□□□□ -0.65
RPE-206ENST00000429921 PHLDB2Q86SQ0 1253 aa11.01□□□□□ -0.65
RPE-206ENST00000429921 CREG2Q8IUH2 290 aa11.01□□□□□ -0.65
RPE-206ENST00000429921 TMEM130Q8N3G9 435 aa11.01□□□□□ -0.65
RPE-206ENST00000429921 XXYLT1Q8NBI6 393 aa11.01□□□□□ -0.65
RPE-206ENST00000429921 TRAPPC12Q8WVT3 735 aa11.01□□□□□ -0.65
RPE-206ENST00000429921 OSBPL9Q96SU4 736 aa11.01□□□□□ -0.65
RPE-206ENST00000429921 FAM213AQ9BRX8 229 aa11.01□□□□□ -0.65
RPE-206ENST00000429921 TLR10Q9BXR5 811 aa11.01□□□□□ -0.65
RPE-206ENST00000429921 EDEM3Q9BZQ6 932 aa11.01□□□□□ -0.65
RPE-206ENST00000429921 TSGA10Q9BZW7 698 aa11.01□□□□□ -0.65
RPE-206ENST00000429921 PLCB1Q9NQ66 1216 aa11.01□□□□□ -0.65
RPE-206ENST00000429921 MAP3K20Q9NYL2 800 aaKnown RBP11.01□□□□□ -0.65
RPE-206ENST00000429921 NAGPAQ9UK23 515 aa11.01□□□□□ -0.65
RPE-206ENST00000429921 SNX12Q9UMY4 172 aa11.01□□□□□ -0.65
RPE-206ENST00000429921 LRRIQ4A6NIV6 560 aa11□□□□□ -0.65
RPE-206ENST00000429921 TTLL13PA6NNM8 815 aa11□□□□□ -0.65
RPE-206ENST00000429921 F8VZ95 297 aa11□□□□□ -0.65
RPE-206ENST00000429921 UBA1P22314 1058 aaKnown RBP11□□□□□ -0.65
RPE-206ENST00000429921 EPHX2P34913 555 aa11□□□□□ -0.65
RPE-206ENST00000429921 GJA5P36382 358 aa11□□□□□ -0.65
RPE-206ENST00000429921 PLA2G4AP47712 749 aa11□□□□□ -0.65
RPE-206ENST00000429921 IREB2P48200 963 aaKnown RBP11□□□□□ -0.65
RPE-206ENST00000429921 ACOT2P49753 483 aa11□□□□□ -0.65
RPE-206ENST00000429921 POLGP54098 1239 aaPredicted RBP11□□□□□ -0.65
RPE-206ENST00000429921 GTF2BQ00403 316 aa11□□□□□ -0.65
RPE-206ENST00000429921 EPC2Q52LR7 807 aa11□□□□□ -0.65
RPE-206ENST00000429921 ZBTB41Q5SVQ8 909 aa11□□□□□ -0.65
RPE-206ENST00000429921 MAP1SQ66K74 1059 aaPredicted RBP11□□□□□ -0.65
RPE-206ENST00000429921 TAS1R3Q7RTX0 852 aa11□□□□□ -0.65
RPE-206ENST00000429921 TRIM58Q8NG06 486 aa11□□□□□ -0.65
RPE-206ENST00000429921 ASAP3Q8TDY4 903 aa11□□□□□ -0.65
RPE-206ENST00000429921 DHX38Q92620 1227 aaKnown RBP11□□□□□ -0.65
RPE-206ENST00000429921 NOX5Q96PH1 765 aa11□□□□□ -0.65
RPE-206ENST00000429921 OSGEPQ9NPF4 335 aa11□□□□□ -0.65
RPE-206ENST00000429921 ZNF302Q9NR11 478 aa11□□□□□ -0.65
RPE-206ENST00000429921 PDGFCQ9NRA1 345 aa11□□□□□ -0.65
RPE-206ENST00000429921 ARGLU1Q9NWB6 273 aaPredicted RBP11□□□□□ -0.65
RPE-206ENST00000429921 WDR90Q96KV7 1748 aa11□□□□□ -0.65
RPE-206ENST00000429921 WDR81Q562E7 1941 aa11□□□□□ -0.65
RPE-206ENST00000429921 GRID2IPA4D2P6 1211 aa11□□□□□ -0.65
RPE-206ENST00000429921 HNRNPDLO14979 420 aaKnown RBP11□□□□□ -0.65
RPE-206ENST00000429921 LYPLA2O95372 231 aa11□□□□□ -0.65
RPE-206ENST00000429921 TBC1D8O95759 1140 aa11□□□□□ -0.65
RPE-206ENST00000429921 EDN1P05305 212 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms