RNA–Protein interactions for RNA: ENST00000428728.5

TRIM39-209, Transcript of tripartite motif containing 39, humanhuman

TSL 3

Gene TRIM39, Length 1,013 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-209ENST00000428728 SPIRE1Q08AE8 756 aa19.1■□□□□ 0.65
TRIM39-209ENST00000428728 CTTNQ14247 550 aaKnown RBP19.1■□□□□ 0.65
TRIM39-209ENST00000428728 EMC2Q15006 297 aa19.1■□□□□ 0.65
TRIM39-209ENST00000428728 TMC7Q7Z402 723 aa19.1■□□□□ 0.65
TRIM39-209ENST00000428728 RNF135Q8IUD6 432 aa19.1■□□□□ 0.65
TRIM39-209ENST00000428728 SLFN12Q8IYM2 578 aa19.1■□□□□ 0.65
TRIM39-209ENST00000428728 NSUN7Q8NE18 718 aaKnown RBP19.1■□□□□ 0.65
TRIM39-209ENST00000428728 PSPC1Q8WXF1 523 aaKnown RBP19.1■□□□□ 0.65
TRIM39-209ENST00000428728 TNFRSF25Q93038 417 aa19.1■□□□□ 0.65
TRIM39-209ENST00000428728 APOL5Q9BWW9 433 aa19.1■□□□□ 0.65
TRIM39-209ENST00000428728 DHX33Q9H6R0 707 aaKnown RBP19.1■□□□□ 0.65
TRIM39-209ENST00000428728 IFT122Q9HBG6 1241 aa19.1■□□□□ 0.65
TRIM39-209ENST00000428728 JAK2O60674 1132 aa19.09■□□□□ 0.65
TRIM39-209ENST00000428728 RFC5P40937 340 aa19.09■□□□□ 0.65
TRIM39-209ENST00000428728 TECP42680 631 aa19.09■□□□□ 0.65
TRIM39-209ENST00000428728 XKR9Q5GH70 373 aa19.09■□□□□ 0.65
TRIM39-209ENST00000428728 GLB1LQ6UWU2 654 aa19.09■□□□□ 0.65
TRIM39-209ENST00000428728 C4orf19Q8IY42 314 aa19.09■□□□□ 0.65
TRIM39-209ENST00000428728 NGRNQ9NPE2 291 aaKnown RBP19.09■□□□□ 0.65
TRIM39-209ENST00000428728 AGPAT5Q9NUQ2 364 aa19.09■□□□□ 0.65
TRIM39-209ENST00000428728 TECTAO75443 2155 aa19.08■□□□□ 0.65
TRIM39-209ENST00000428728 ZBTB39O15060 712 aa19.08■□□□□ 0.64
TRIM39-209ENST00000428728 SRGAP2CP0DJJ0 459 aa19.08■□□□□ 0.64
TRIM39-209ENST00000428728 SKIP12755 728 aa19.08■□□□□ 0.64
TRIM39-209ENST00000428728 ALDH7A1P49419 539 aaKnown RBP19.08■□□□□ 0.64
TRIM39-209ENST00000428728 RAB27AP51159 221 aa19.08■□□□□ 0.64
TRIM39-209ENST00000428728 NEK4P51957 841 aa19.08■□□□□ 0.64
TRIM39-209ENST00000428728 LAMTOR4Q0VGL1 99 aa19.08■□□□□ 0.64
TRIM39-209ENST00000428728 SMC1AQ14683 1233 aaKnown RBP19.08■□□□□ 0.64
TRIM39-209ENST00000428728 TPH2Q8IWU9 490 aa19.08■□□□□ 0.64
TRIM39-209ENST00000428728 PRPF31Q8WWY3 499 aaKnown RBP19.08■□□□□ 0.64
TRIM39-209ENST00000428728 TMEM169Q96HH4 297 aa19.08■□□□□ 0.64
TRIM39-209ENST00000428728 TRAIPQ9BWF2 469 aa19.08■□□□□ 0.64
TRIM39-209ENST00000428728 GBP3Q9H0R5 595 aa19.08■□□□□ 0.64
TRIM39-209ENST00000428728 MINDY3Q9H8M7 445 aa19.08■□□□□ 0.64
TRIM39-209ENST00000428728 TBC1D13Q9NVG8 400 aa19.08■□□□□ 0.64
TRIM39-209ENST00000428728 BTBD18B2RXH4 712 aa19.07■□□□□ 0.64
TRIM39-209ENST00000428728 WNT7AO00755 349 aa19.07■□□□□ 0.64
TRIM39-209ENST00000428728 RNASELQ05823 741 aaKnown RBP19.07■□□□□ 0.64
TRIM39-209ENST00000428728 KCNC3Q14003 757 aa19.07■□□□□ 0.64
TRIM39-209ENST00000428728 TRIM29Q14134 588 aa19.07■□□□□ 0.64
TRIM39-209ENST00000428728 CALCRLQ16602 461 aa19.07■□□□□ 0.64
TRIM39-209ENST00000428728 HERC4Q5GLZ8 1057 aaPredicted RBP19.07■□□□□ 0.64
TRIM39-209ENST00000428728 NOMO2Q5JPE7 1267 aa19.07■□□□□ 0.64
TRIM39-209ENST00000428728 ANKRD54Q6NXT1 300 aa19.07■□□□□ 0.64
TRIM39-209ENST00000428728 OTUD6AQ7L8S5 288 aa19.07■□□□□ 0.64
TRIM39-209ENST00000428728 TMEM173Q86WV6 379 aaPredicted RBP19.07■□□□□ 0.64
TRIM39-209ENST00000428728 DIS3L2Q8IYB7 885 aaKnown RBP19.07■□□□□ 0.64
TRIM39-209ENST00000428728 EXOC8Q8IYI6 725 aa19.07■□□□□ 0.64
TRIM39-209ENST00000428728 RNF149Q8NC42 400 aa19.07■□□□□ 0.64
TRIM39-209ENST00000428728 TCP11Q8WWU5 503 aa19.07■□□□□ 0.64
TRIM39-209ENST00000428728 RPGRIP1Q96KN7 1286 aa19.07■□□□□ 0.64
TRIM39-209ENST00000428728 MTRQ99707 1265 aa19.07■□□□□ 0.64
TRIM39-209ENST00000428728 PHF7Q9BWX1 381 aaPredicted RBP19.07■□□□□ 0.64
TRIM39-209ENST00000428728 ZSWIM4Q9H7M6 989 aa19.07■□□□□ 0.64
TRIM39-209ENST00000428728 PPME1Q9Y570 386 aa19.07■□□□□ 0.64
TRIM39-209ENST00000428728 PCDHB2Q9Y5E7 798 aa19.07■□□□□ 0.64
TRIM39-209ENST00000428728 DENND4AQ7Z401 1863 aa19.06■□□□□ 0.64
TRIM39-209ENST00000428728 LOC730098B7Z3J9 87 aa19.06■□□□□ 0.64
TRIM39-209ENST00000428728 GAS2O43903 313 aaKnown RBP19.06■□□□□ 0.64
TRIM39-209ENST00000428728 NEMFO60524 1076 aa19.06■□□□□ 0.64
TRIM39-209ENST00000428728 SRGAP1Q7Z6B7 1085 aa19.06■□□□□ 0.64
TRIM39-209ENST00000428728 FERMT3Q86UX7 667 aa19.06■□□□□ 0.64
TRIM39-209ENST00000428728 AUTS2Q8WXX7 1259 aa19.06■□□□□ 0.64
TRIM39-209ENST00000428728 SUSD6Q92537 303 aa19.06■□□□□ 0.64
TRIM39-209ENST00000428728 EIF2AK1Q9BQI3 630 aaKnown RBP19.06■□□□□ 0.64
TRIM39-209ENST00000428728 NRDE2Q9H7Z3 1164 aa19.06■□□□□ 0.64
TRIM39-209ENST00000428728 C2orf16Q68DN1 1984 aa19.06■□□□□ 0.64
TRIM39-209ENST00000428728 PLXNA3P51805 1871 aa19.05■□□□□ 0.64
TRIM39-209ENST00000428728 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP19.05■□□□□ 0.64
TRIM39-209ENST00000428728 C2orf71A6NGG8 1288 aa19.05■□□□□ 0.64
TRIM39-209ENST00000428728 SP100P23497 879 aaPredicted RBP19.05■□□□□ 0.64
TRIM39-209ENST00000428728 ST3GAL1Q11201 340 aa19.05■□□□□ 0.64
TRIM39-209ENST00000428728 CBX2Q14781 532 aaPredicted RBP19.05■□□□□ 0.64
TRIM39-209ENST00000428728 TMEM184AQ6ZMB5 413 aa19.05■□□□□ 0.64
TRIM39-209ENST00000428728 VPS52Q8N1B4 723 aa19.05■□□□□ 0.64
TRIM39-209ENST00000428728 BCL7CQ8WUZ0 217 aaPredicted RBP19.05■□□□□ 0.64
TRIM39-209ENST00000428728 PGBD4Q96DM1 585 aa19.05■□□□□ 0.64
TRIM39-209ENST00000428728 CCDC43Q96MW1 224 aaKnown RBP19.05■□□□□ 0.64
TRIM39-209ENST00000428728 TTC12Q9H892 705 aaPredicted RBP19.05■□□□□ 0.64
TRIM39-209ENST00000428728 DNAJB4Q9UDY4 337 aa19.05■□□□□ 0.64
TRIM39-209ENST00000428728 CDH22Q9UJ99 828 aa19.05■□□□□ 0.64
TRIM39-209ENST00000428728 PCDHA12Q9UN75 941 aa19.05■□□□□ 0.64
TRIM39-209ENST00000428728 HCFC2Q9Y5Z7 792 aa19.05■□□□□ 0.64
TRIM39-209ENST00000428728 ZNF318Q5VUA4 2279 aa19.05■□□□□ 0.64
TRIM39-209ENST00000428728 KMT2EQ8IZD2 1858 aa19.05■□□□□ 0.64
TRIM39-209ENST00000428728 B4GALT3O60512 393 aa19.04■□□□□ 0.64
TRIM39-209ENST00000428728 ZNF623O75123 536 aa19.04■□□□□ 0.64
TRIM39-209ENST00000428728 OFD1O75665 1012 aa19.04■□□□□ 0.64
TRIM39-209ENST00000428728 ERLIN2O94905 339 aa19.04■□□□□ 0.64
TRIM39-209ENST00000428728 SLITRK3O94933 977 aa19.04■□□□□ 0.64
TRIM39-209ENST00000428728 SEC24BO95487 1268 aa19.04■□□□□ 0.64
TRIM39-209ENST00000428728 TXKP42681 527 aa19.04■□□□□ 0.64
TRIM39-209ENST00000428728 GUCY1B3Q02153 619 aa19.04■□□□□ 0.64
TRIM39-209ENST00000428728 ERICH6BQ5W0A0 696 aa19.04■□□□□ 0.64
TRIM39-209ENST00000428728 SYCE2Q6PIF2 218 aa19.04■□□□□ 0.64
TRIM39-209ENST00000428728 AGMOQ6ZNB7 445 aa19.04■□□□□ 0.64
TRIM39-209ENST00000428728 HFE2Q6ZVN8 426 aa19.04■□□□□ 0.64
TRIM39-209ENST00000428728 MRPL43Q8N983 215 aaKnown RBP19.04■□□□□ 0.64
TRIM39-209ENST00000428728 URGCPQ8TCY9 931 aa19.04■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms