RNA–Protein interactions for RNA: ENST00000428135.7

SNX13-203, Transcript of sorting nexin 13, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX13, Length 6,357 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-203ENST00000428135 SLC10A5Q5PT55 438 aa10.41□□□□□ -0.74
SNX13-203ENST00000428135 TRIM68Q6AZZ1 485 aa10.41□□□□□ -0.74
SNX13-203ENST00000428135 ZNF449Q6P9G9 518 aa10.41□□□□□ -0.74
SNX13-203ENST00000428135 IFT122Q9HBG6 1241 aa10.41□□□□□ -0.74
SNX13-203ENST00000428135 AK9Q5TCS8 1911 aa10.41□□□□□ -0.74
SNX13-203ENST00000428135 FRMPD1Q5SYB0 1578 aa10.41□□□□□ -0.74
SNX13-203ENST00000428135 SPATA31D1Q6ZQQ2 1576 aa10.41□□□□□ -0.74
SNX13-203ENST00000428135 NCK2O43639 380 aa10.41□□□□□ -0.74
SNX13-203ENST00000428135 SRGNP10124 158 aa10.41□□□□□ -0.74
SNX13-203ENST00000428135 FAM20AQ96MK3 541 aa10.41□□□□□ -0.74
SNX13-203ENST00000428135 MMTAG2Q9BU76 263 aaKnown RBP10.41□□□□□ -0.74
SNX13-203ENST00000428135 VCX3BQ9H321 246 aa10.41□□□□□ -0.74
SNX13-203ENST00000428135 SYNDIG1Q9H7V2 258 aa10.41□□□□□ -0.74
SNX13-203ENST00000428135 PRR12Q9ULL5 1215 aa10.41□□□□□ -0.74
SNX13-203ENST00000428135 ASB14A6NK59 587 aa10.41□□□□□ -0.74
SNX13-203ENST00000428135 PSMC1P62191 440 aaKnown RBP10.41□□□□□ -0.74
SNX13-203ENST00000428135 CFAP61Q8NHU2 1237 aa10.41□□□□□ -0.74
SNX13-203ENST00000428135 LBHD1Q9BQE6 289 aaPredicted RBP10.41□□□□□ -0.74
SNX13-203ENST00000428135 FSD1LQ9BXM9 530 aa10.41□□□□□ -0.74
SNX13-203ENST00000428135 CDC23Q9UJX2 597 aa10.41□□□□□ -0.74
SNX13-203ENST00000428135 EMSYQ7Z589 1322 aa10.41□□□□□ -0.74
SNX13-203ENST00000428135 RPAP1Q9BWH6 1393 aaPredicted RBP10.41□□□□□ -0.74
SNX13-203ENST00000428135 SERPINB6P35237 376 aa10.41□□□□□ -0.74
SNX13-203ENST00000428135 VSTM4Q8IW00 320 aa10.41□□□□□ -0.74
SNX13-203ENST00000428135 ATG4CQ96DT6 458 aa10.41□□□□□ -0.74
SNX13-203ENST00000428135 IFT43Q96FT9 208 aa10.41□□□□□ -0.74
SNX13-203ENST00000428135 NUDCD1Q96RS6 583 aa10.41□□□□□ -0.74
SNX13-203ENST00000428135 CCDC78A2IDD5 438 aa10.41□□□□□ -0.74
SNX13-203ENST00000428135 DFFAO00273 331 aa10.41□□□□□ -0.74
SNX13-203ENST00000428135 LMNB2Q03252 620 aa10.41□□□□□ -0.74
SNX13-203ENST00000428135 BRD3Q15059 726 aa10.41□□□□□ -0.74
SNX13-203ENST00000428135 PDIA6Q15084 440 aa10.41□□□□□ -0.74
SNX13-203ENST00000428135 TFRCP02786 760 aaKnown RBP10.4□□□□□ -0.74
SNX13-203ENST00000428135 PRKCBP05771 671 aa10.4□□□□□ -0.74
SNX13-203ENST00000428135 FGD4Q96M96 766 aa10.4□□□□□ -0.74
SNX13-203ENST00000428135 CAPS2Q9BXY5 557 aa10.4□□□□□ -0.74
SNX13-203ENST00000428135 INTS9Q9NV88 658 aaKnown RBP10.4□□□□□ -0.74
SNX13-203ENST00000428135 PLEKHG2Q9H7P9 1386 aa10.4□□□□□ -0.74
SNX13-203ENST00000428135 TADA2AO75478 443 aa10.4□□□□□ -0.74
SNX13-203ENST00000428135 SFNP31947 248 aa10.4□□□□□ -0.74
SNX13-203ENST00000428135 ATN1P54259 1190 aaPredicted RBP10.4□□□□□ -0.74
SNX13-203ENST00000428135 DRAP1Q14919 205 aaPredicted RBP10.4□□□□□ -0.74
SNX13-203ENST00000428135 CEP55Q53EZ4 464 aa10.4□□□□□ -0.74
SNX13-203ENST00000428135 FAM102AQ5T9C2 384 aaPredicted RBP10.4□□□□□ -0.74
SNX13-203ENST00000428135 HAUS6Q7Z4H7 955 aa10.4□□□□□ -0.74
SNX13-203ENST00000428135 BBOF1Q8ND07 529 aa10.4□□□□□ -0.74
SNX13-203ENST00000428135 TBRG4Q969Z0 631 aaKnown RBP eCLIP10.4□□□□□ -0.74
SNX13-203ENST00000428135 TEX13BQ9BXU2 312 aa10.4□□□□□ -0.74
SNX13-203ENST00000428135 KCNJ6P48051 423 aa10.4□□□□□ -0.74
SNX13-203ENST00000428135 DDR1Q08345 913 aa10.4□□□□□ -0.74
SNX13-203ENST00000428135 ATXN7L3BQ96GX2 97 aa10.4□□□□□ -0.74
SNX13-203ENST00000428135 ACAP3Q96P50 834 aa10.4□□□□□ -0.74
SNX13-203ENST00000428135 INTS2Q9H0H0 1204 aaKnown RBP10.4□□□□□ -0.74
SNX13-203ENST00000428135 HPCAL4Q9UM19 191 aa10.4□□□□□ -0.74
SNX13-203ENST00000428135 RGL2O15211 777 aa10.4□□□□□ -0.74
SNX13-203ENST00000428135 MT-ND3P03897 115 aa10.4□□□□□ -0.74
SNX13-203ENST00000428135 PGK2P07205 417 aa10.4□□□□□ -0.74
SNX13-203ENST00000428135 DR1Q01658 176 aa10.4□□□□□ -0.74
SNX13-203ENST00000428135 ZNF543Q08ER8 600 aa10.4□□□□□ -0.74
SNX13-203ENST00000428135 ALCAMQ13740 583 aa10.4□□□□□ -0.74
SNX13-203ENST00000428135 ZNF467Q7Z7K2 595 aaPredicted RBP10.4□□□□□ -0.74
SNX13-203ENST00000428135 GSPT2Q8IYD1 628 aaKnown RBP10.4□□□□□ -0.74
SNX13-203ENST00000428135 DHX35Q9H5Z1 703 aaKnown RBP10.4□□□□□ -0.74
SNX13-203ENST00000428135 CPA4Q9UI42 421 aa10.4□□□□□ -0.74
SNX13-203ENST00000428135 LAMC1P11047 1609 aa10.4□□□□□ -0.75
SNX13-203ENST00000428135 YWHAHQ04917 246 aaPredicted RBP10.4□□□□□ -0.75
SNX13-203ENST00000428135 GNASQ5JWF2 1037 aa10.4□□□□□ -0.75
SNX13-203ENST00000428135 NBPF12Q5TAG4 269 aaPredicted RBP10.4□□□□□ -0.75
SNX13-203ENST00000428135 RNF135Q8IUD6 432 aa10.4□□□□□ -0.75
SNX13-203ENST00000428135 ARHGAP24Q8N264 748 aa10.4□□□□□ -0.75
SNX13-203ENST00000428135 BCAS4Q8TDM0 211 aa10.4□□□□□ -0.75
SNX13-203ENST00000428135 PYROXD1Q8WU10 500 aa10.4□□□□□ -0.75
SNX13-203ENST00000428135 RSRC1Q96IZ7 334 aaKnown RBP10.4□□□□□ -0.75
SNX13-203ENST00000428135 TTC1Q99614 292 aa10.4□□□□□ -0.75
SNX13-203ENST00000428135 NUP85Q9BW27 656 aa10.4□□□□□ -0.75
SNX13-203ENST00000428135 SETBP1Q9Y6X0 1596 aa10.39□□□□□ -0.75
SNX13-203ENST00000428135 EXOC1LA0A1B0GW35 172 aa10.39□□□□□ -0.75
SNX13-203ENST00000428135 NCF2P19878 526 aaPredicted RBP10.39□□□□□ -0.75
SNX13-203ENST00000428135 SEZ6Q53EL9 994 aa10.39□□□□□ -0.75
SNX13-203ENST00000428135 ELMSAN1Q6PJG2 1045 aa10.39□□□□□ -0.75
SNX13-203ENST00000428135 DDX53Q86TM3 631 aaKnown RBP10.39□□□□□ -0.75
SNX13-203ENST00000428135 BAG5Q9UL15 447 aa10.39□□□□□ -0.75
SNX13-203ENST00000428135 AGAP1Q9UPQ3 857 aa10.39□□□□□ -0.75
SNX13-203ENST00000428135 SNX9Q9Y5X1 595 aa10.39□□□□□ -0.75
SNX13-203ENST00000428135 GRAP2O75791 330 aa10.39□□□□□ -0.75
SNX13-203ENST00000428135 PPP2R5EQ16537 467 aa10.39□□□□□ -0.75
SNX13-203ENST00000428135 EFCAB13Q8IY85 973 aa10.39□□□□□ -0.75
SNX13-203ENST00000428135 TMEM35BQ8NCS4 154 aa10.39□□□□□ -0.75
SNX13-203ENST00000428135 SLC30A5Q8TAD4 765 aa10.39□□□□□ -0.75
SNX13-203ENST00000428135 KIFC3Q9BVG8 833 aa10.39□□□□□ -0.75
SNX13-203ENST00000428135 ADAM33Q9BZ11 813 aa10.39□□□□□ -0.75
SNX13-203ENST00000428135 GBA2Q9HCG7 927 aaPredicted RBP10.39□□□□□ -0.75
SNX13-203ENST00000428135 ADARB2Q9NS39 739 aaKnown RBP10.39□□□□□ -0.75
SNX13-203ENST00000428135 COL5A2P05997 1499 aaPredicted RBP10.39□□□□□ -0.75
SNX13-203ENST00000428135 TEX33O43247 280 aa10.39□□□□□ -0.75
SNX13-203ENST00000428135 KRT3P12035 628 aa10.39□□□□□ -0.75
SNX13-203ENST00000428135 RWDD2BP57060 319 aa10.39□□□□□ -0.75
SNX13-203ENST00000428135 WDR72Q3MJ13 1102 aa10.39□□□□□ -0.75
SNX13-203ENST00000428135 TRIM67Q6ZTA4 783 aa10.39□□□□□ -0.75
SNX13-203ENST00000428135 SPDL1Q96EA4 605 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms