RNA–Protein interactions for RNA: ENST00000427897.1

HSPG2-205, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 589 nt, Biotype non stop decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-205ENST00000427897 MCPH1Q8NEM0 835 aa22.95■■□□□ 1.26
HSPG2-205ENST00000427897 SPPL3Q8TCT6 385 aa22.95■■□□□ 1.26
HSPG2-205ENST00000427897 ZNF558Q96NG5 402 aa22.95■■□□□ 1.26
HSPG2-205ENST00000427897 KIAA1671Q9BY89 1806 aa22.95■■□□□ 1.26
HSPG2-205ENST00000427897 MRPL9Q9BYD2 267 aaKnown RBP22.95■■□□□ 1.26
HSPG2-205ENST00000427897 POLR3FQ9H1D9 316 aaPredicted RBP22.95■■□□□ 1.26
HSPG2-205ENST00000427897 XPNPEP1Q9NQW7 623 aa22.95■■□□□ 1.26
HSPG2-205ENST00000427897 FGF18O76093 207 aa22.94■■□□□ 1.26
HSPG2-205ENST00000427897 MUTP22033 750 aa22.94■■□□□ 1.26
HSPG2-205ENST00000427897 TOB1P50616 345 aaPredicted RBP22.94■■□□□ 1.26
HSPG2-205ENST00000427897 KRT17Q04695 432 aa22.94■■□□□ 1.26
HSPG2-205ENST00000427897 RNASELQ05823 741 aaKnown RBP22.94■■□□□ 1.26
HSPG2-205ENST00000427897 KRT79Q5XKE5 535 aa22.94■■□□□ 1.26
HSPG2-205ENST00000427897 GLB1LQ6UWU2 654 aa22.94■■□□□ 1.26
HSPG2-205ENST00000427897 SNX29Q8TEQ0 813 aa22.94■■□□□ 1.26
HSPG2-205ENST00000427897 UHRF1Q96T88 793 aaPredicted RBP22.94■■□□□ 1.26
HSPG2-205ENST00000427897 CWH43Q9H720 699 aa22.94■■□□□ 1.26
HSPG2-205ENST00000427897 CLDND1Q9NY35 253 aa22.94■■□□□ 1.26
HSPG2-205ENST00000427897 LRRIQ4A6NIV6 560 aa22.93■■□□□ 1.26
HSPG2-205ENST00000427897 AXLP30530 894 aa22.93■■□□□ 1.26
HSPG2-205ENST00000427897 ARL2P36404 184 aa22.93■■□□□ 1.26
HSPG2-205ENST00000427897 PTENP60484 403 aa22.93■■□□□ 1.26
HSPG2-205ENST00000427897 UBE3AQ05086 875 aa22.93■■□□□ 1.26
HSPG2-205ENST00000427897 PCBP1Q15365 356 aaKnown RBP eCLIP22.93■■□□□ 1.264e-6■■■■□ 20.1
HSPG2-205ENST00000427897 CLLU1OSQ5K130 101 aa22.93■■□□□ 1.26
HSPG2-205ENST00000427897 KCNT2Q6UVM3 1135 aa22.93■■□□□ 1.26
HSPG2-205ENST00000427897 C4orf32Q8N8J7 132 aa22.93■■□□□ 1.26
HSPG2-205ENST00000427897 RSPH1Q8WYR4 309 aa22.93■■□□□ 1.26
HSPG2-205ENST00000427897 LPPQ93052 612 aa22.93■■□□□ 1.26
HSPG2-205ENST00000427897 PABPC5Q96DU9 382 aaKnown RBP22.93■■□□□ 1.26
HSPG2-205ENST00000427897 TRAIPQ9BWF2 469 aa22.93■■□□□ 1.26
HSPG2-205ENST00000427897 MINDY3Q9H8M7 445 aa22.93■■□□□ 1.26
HSPG2-205ENST00000427897 HCSTQ9UBK5 93 aa22.93■■□□□ 1.26
HSPG2-205ENST00000427897 KIAA1024Q9UPX6 916 aa22.93■■□□□ 1.26
HSPG2-205ENST00000427897 INPP5FQ9Y2H2 1132 aa22.93■■□□□ 1.26
HSPG2-205ENST00000427897 PCDHB2Q9Y5E7 798 aa22.93■■□□□ 1.26
HSPG2-205ENST00000427897 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP22.92■■□□□ 1.26
HSPG2-205ENST00000427897 BMP1P13497 986 aa22.92■■□□□ 1.26
HSPG2-205ENST00000427897 PPM1AP35813 382 aa22.92■■□□□ 1.26
HSPG2-205ENST00000427897 ALDH7A1P49419 539 aaKnown RBP22.92■■□□□ 1.26
HSPG2-205ENST00000427897 POU5F1BQ06416 359 aa22.92■■□□□ 1.26
HSPG2-205ENST00000427897 CAPSQ13938 189 aa22.92■■□□□ 1.26
HSPG2-205ENST00000427897 TMEM132AQ24JP5 1023 aa22.92■■□□□ 1.26
HSPG2-205ENST00000427897 PADI6Q6TGC4 694 aa22.92■■□□□ 1.26
HSPG2-205ENST00000427897 ZNF598Q86UK7 904 aaKnown RBP22.92■■□□□ 1.26
HSPG2-205ENST00000427897 ZBTB8OSQ8IWT0 167 aa22.92■■□□□ 1.26
HSPG2-205ENST00000427897 URGCPQ8TCY9 931 aa22.92■■□□□ 1.26
HSPG2-205ENST00000427897 TRIM6Q9C030 488 aaPredicted RBP22.92■■□□□ 1.26
HSPG2-205ENST00000427897 EIF4ENIF1Q9NRA8 985 aaKnown RBP22.92■■□□□ 1.26
HSPG2-205ENST00000427897 GLRA2P23416 452 aa22.91■■□□□ 1.26
HSPG2-205ENST00000427897 DNAJB1P25685 340 aa22.91■■□□□ 1.26
HSPG2-205ENST00000427897 PRPHP41219 470 aa22.91■■□□□ 1.26
HSPG2-205ENST00000427897 ZRSR1Q15695 479 aaKnown RBP22.91■■□□□ 1.26
HSPG2-205ENST00000427897 NOTUMQ6P988 496 aa22.91■■□□□ 1.26
HSPG2-205ENST00000427897 LRRC55Q6ZSA7 311 aa22.91■■□□□ 1.26
HSPG2-205ENST00000427897 CNNM3Q8NE01 707 aa22.91■■□□□ 1.26
HSPG2-205ENST00000427897 ASAP3Q8TDY4 903 aa22.91■■□□□ 1.26
HSPG2-205ENST00000427897 TLR9Q9NR96 1032 aa22.91■■□□□ 1.26
HSPG2-205ENST00000427897 DDX19AQ9NUU7 478 aaKnown RBP22.91■■□□□ 1.26
HSPG2-205ENST00000427897 RNF19AQ9NV58 838 aa22.91■■□□□ 1.26
HSPG2-205ENST00000427897 SPG21Q9NZD8 308 aa22.91■■□□□ 1.26
HSPG2-205ENST00000427897 DNM3Q9UQ16 869 aa22.91■■□□□ 1.26
HSPG2-205ENST00000427897 TNFRSF10AO00220 468 aa22.9■■□□□ 1.26
HSPG2-205ENST00000427897 ZNF623O75123 536 aa22.9■■□□□ 1.26
HSPG2-205ENST00000427897 ATF7P17544 494 aaPredicted RBP22.9■■□□□ 1.26
HSPG2-205ENST00000427897 PDCP20941 246 aa22.9■■□□□ 1.26
HSPG2-205ENST00000427897 BMS1Q14692 1282 aaKnown RBP22.9■■□□□ 1.26
HSPG2-205ENST00000427897 NOMO2Q5JPE7 1267 aa22.9■■□□□ 1.26
HSPG2-205ENST00000427897 PDE12Q6L8Q7 609 aaKnown RBP22.9■■□□□ 1.26
HSPG2-205ENST00000427897 RBM23Q86U06 439 aaKnown RBP22.9■■□□□ 1.26
HSPG2-205ENST00000427897 HACE1Q8IYU2 909 aa22.9■■□□□ 1.26
HSPG2-205ENST00000427897 CPB2Q96IY4 423 aa22.9■■□□□ 1.26
HSPG2-205ENST00000427897 FAM193BQ96PV7 902 aaPredicted RBP22.9■■□□□ 1.26
HSPG2-205ENST00000427897 GPRC5CQ9NQ84 441 aa22.9■■□□□ 1.26
HSPG2-205ENST00000427897 FAM50BQ9Y247 325 aa22.9■■□□□ 1.26
HSPG2-205ENST00000427897 TCF20Q9UGU0 1960 aaKnown RBP22.89■■□□□ 1.26
HSPG2-205ENST00000427897 VPS37CA5D8V6 355 aaPredicted RBP22.89■■□□□ 1.25
HSPG2-205ENST00000427897 CARNS1A5YM72 827 aa22.89■■□□□ 1.25
HSPG2-205ENST00000427897 H3BQ06 376 aaPredicted RBP22.89■■□□□ 1.25
HSPG2-205ENST00000427897 ITGA4P13612 1032 aa22.89■■□□□ 1.25
HSPG2-205ENST00000427897 CYP11B2P19099 503 aa22.89■■□□□ 1.25
HSPG2-205ENST00000427897 CA8P35219 290 aa22.89■■□□□ 1.25
HSPG2-205ENST00000427897 HYAL1Q12794 435 aa22.89■■□□□ 1.25
HSPG2-205ENST00000427897 PUS10Q3MIT2 529 aaKnown RBP22.89■■□□□ 1.25
HSPG2-205ENST00000427897 LEXMQ3ZCV2 418 aa22.89■■□□□ 1.25
HSPG2-205ENST00000427897 IGSF22Q8N9C0 903 aa22.89■■□□□ 1.25
HSPG2-205ENST00000427897 MRPS27Q92552 414 aaKnown RBP22.89■■□□□ 1.25
HSPG2-205ENST00000427897 CDK5RAP3Q96JB5 506 aa22.89■■□□□ 1.25
HSPG2-205ENST00000427897 IFT74Q96LB3 600 aa22.89■■□□□ 1.25
HSPG2-205ENST00000427897 GBP3Q9H0R5 595 aa22.89■■□□□ 1.25
HSPG2-205ENST00000427897 BHMT2Q9H2M3 363 aa22.89■■□□□ 1.25
HSPG2-205ENST00000427897 TLE6Q9H808 572 aa22.89■■□□□ 1.25
HSPG2-205ENST00000427897 UBN1Q9NPG3 1134 aa22.89■■□□□ 1.25
HSPG2-205ENST00000427897 ENTPD7Q9NQZ7 604 aa22.89■■□□□ 1.25
HSPG2-205ENST00000427897 REV3LO60673 3130 aa22.89■■□□□ 1.25
HSPG2-205ENST00000427897 A0A0C4DFX4 3053 aa22.88■■□□□ 1.25
HSPG2-205ENST00000427897 PLXNA4Q9HCM2 1894 aa22.88■■□□□ 1.25
HSPG2-205ENST00000427897 TSPAN1O60635 241 aa22.88■■□□□ 1.25
HSPG2-205ENST00000427897 ZC3H11AO75152 810 aaKnown RBP eCLIP22.88■■□□□ 1.25
HSPG2-205ENST00000427897 LIG1P18858 919 aa22.88■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms