RNA–Protein interactions for RNA: ENST00000427183.6

HDLBP-214, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2 BASIC

Gene HDLBP, Length 6,238 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-214ENST00000427183 DCPSQ96C86 337 aaKnown RBP13.35□□□□□ -0.27
HDLBP-214ENST00000427183 SMAD5Q99717 465 aaKnown RBP13.35□□□□□ -0.27
HDLBP-214ENST00000427183 TSC22D4Q9Y3Q8 395 aa13.35□□□□□ -0.27
HDLBP-214ENST00000427183 PLEKHG1Q9ULL1 1385 aa13.35□□□□□ -0.27
HDLBP-214ENST00000427183 LRRC7Q96NW7 1537 aa13.35□□□□□ -0.27
HDLBP-214ENST00000427183 LAD1O00515 517 aa13.35□□□□□ -0.27
HDLBP-214ENST00000427183 NCK2O43639 380 aa13.35□□□□□ -0.27
HDLBP-214ENST00000427183 PHKA1P46020 1223 aa13.35□□□□□ -0.27
HDLBP-214ENST00000427183 OLFM3Q96PB7 478 aa13.35□□□□□ -0.27
HDLBP-214ENST00000427183 SH3GL3Q99963 347 aa13.35□□□□□ -0.27
HDLBP-214ENST00000427183 THAP9Q9H5L6 903 aa13.35□□□□□ -0.27
HDLBP-214ENST00000427183 BRAFP15056 766 aa13.35□□□□□ -0.27
HDLBP-214ENST00000427183 SSTR3P32745 418 aaPredicted RBP13.35□□□□□ -0.27
HDLBP-214ENST00000427183 ALDH18A1P54886 795 aaKnown RBP13.35□□□□□ -0.27
HDLBP-214ENST00000427183 MKRN3Q13064 507 aaKnown RBP13.35□□□□□ -0.27
HDLBP-214ENST00000427183 CEP78Q5JTW2 689 aa13.35□□□□□ -0.27
HDLBP-214ENST00000427183 RNF219Q5W0B1 726 aaPredicted RBP13.35□□□□□ -0.27
HDLBP-214ENST00000427183 LVRNQ6Q4G3 990 aa13.35□□□□□ -0.27
HDLBP-214ENST00000427183 PCSK1NQ9UHG2 260 aa13.35□□□□□ -0.27
HDLBP-214ENST00000427183 LOC102724159A0A0B4J2E5 919 aa13.34□□□□□ -0.27
HDLBP-214ENST00000427183 RASSF10A6NK89 507 aa13.34□□□□□ -0.27
HDLBP-214ENST00000427183 PWP2Q15269 919 aaKnown RBP13.34□□□□□ -0.27
HDLBP-214ENST00000427183 CCDC142Q17RM4 750 aa13.34□□□□□ -0.27
HDLBP-214ENST00000427183 NUP93Q8N1F7 819 aa13.34□□□□□ -0.27
HDLBP-214ENST00000427183 ARMC2Q8NEN0 867 aa13.34□□□□□ -0.27
HDLBP-214ENST00000427183 PAGE5Q96GU1 130 aa13.34□□□□□ -0.27
HDLBP-214ENST00000427183 ZCCHC17Q9NP64 241 aaKnown RBP13.34□□□□□ -0.27
HDLBP-214ENST00000427183 PODXLO00592 558 aa13.34□□□□□ -0.27
HDLBP-214ENST00000427183 KRT75O95678 551 aa13.34□□□□□ -0.27
HDLBP-214ENST00000427183 KRT17Q04695 432 aa13.34□□□□□ -0.27
HDLBP-214ENST00000427183 C1orf228Q6PIY5 440 aa13.34□□□□□ -0.27
HDLBP-214ENST00000427183 NLRP14Q86W24 1093 aa13.34□□□□□ -0.27
HDLBP-214ENST00000427183 PLD3Q8IV08 490 aa13.34□□□□□ -0.27
HDLBP-214ENST00000427183 THNSL1Q8IYQ7 743 aa13.34□□□□□ -0.27
HDLBP-214ENST00000427183 SH3KBP1Q96B97 665 aa13.34□□□□□ -0.27
HDLBP-214ENST00000427183 GCNAQ96QF7 691 aa13.34□□□□□ -0.27
HDLBP-214ENST00000427183 NDFIP2Q9NV92 336 aa13.34□□□□□ -0.27
HDLBP-214ENST00000427183 CNOT8Q9UFF9 292 aaKnown RBP13.34□□□□□ -0.27
HDLBP-214ENST00000427183 F8W8V4 182 aa13.34□□□□□ -0.27
HDLBP-214ENST00000427183 GFPT1Q06210 699 aaPredicted RBP13.34□□□□□ -0.27
HDLBP-214ENST00000427183 TRAF7Q6Q0C0 670 aa13.34□□□□□ -0.27
HDLBP-214ENST00000427183 AK8Q96MA6 479 aa13.34□□□□□ -0.27
HDLBP-214ENST00000427183 PCDHB6Q9Y5E3 794 aa13.34□□□□□ -0.27
HDLBP-214ENST00000427183 RGS12O14924 1447 aa13.34□□□□□ -0.27
HDLBP-214ENST00000427183 HOXA13P31271 388 aaPredicted RBP13.34□□□□□ -0.27
HDLBP-214ENST00000427183 PPP2R2AP63151 447 aa13.34□□□□□ -0.27
HDLBP-214ENST00000427183 FASTKD1Q53R41 847 aaKnown RBP13.34□□□□□ -0.27
HDLBP-214ENST00000427183 ZNF467Q7Z7K2 595 aaPredicted RBP13.34□□□□□ -0.27
HDLBP-214ENST00000427183 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.34□□□□□ -0.27
HDLBP-214ENST00000427183 CCND2P30279 289 aa13.34□□□□□ -0.27
HDLBP-214ENST00000427183 PEX3P56589 373 aa13.34□□□□□ -0.27
HDLBP-214ENST00000427183 KDSRQ06136 332 aa13.34□□□□□ -0.27
HDLBP-214ENST00000427183 SYCP2LQ5T4T6 812 aa13.34□□□□□ -0.27
HDLBP-214ENST00000427183 TTLL7Q6ZT98 887 aa13.34□□□□□ -0.27
HDLBP-214ENST00000427183 EXOC8Q8IYI6 725 aa13.34□□□□□ -0.27
HDLBP-214ENST00000427183 NDUFAF2Q8N183 169 aa13.34□□□□□ -0.27
HDLBP-214ENST00000427183 FLCNQ8NFG4 579 aa13.34□□□□□ -0.27
HDLBP-214ENST00000427183 SH3GL2Q99962 352 aa13.34□□□□□ -0.27
HDLBP-214ENST00000427183 MRPL40Q9NQ50 206 aaKnown RBP13.34□□□□□ -0.27
HDLBP-214ENST00000427183 PRDM5Q9NQX1 630 aaPredicted RBP13.34□□□□□ -0.27
HDLBP-214ENST00000427183 TMEM161AQ9NX61 479 aa13.34□□□□□ -0.27
HDLBP-214ENST00000427183 ADAM22Q9P0K1 906 aa13.34□□□□□ -0.27
HDLBP-214ENST00000427183 ZNF212Q9UDV6 495 aa13.34□□□□□ -0.27
HDLBP-214ENST00000427183 NIPSNAP3AQ9UFN0 247 aaPredicted RBP13.34□□□□□ -0.27
HDLBP-214ENST00000427183 PTCH1Q13635 1447 aa13.33□□□□□ -0.27
HDLBP-214ENST00000427183 KCNQ3O43525 872 aa13.33□□□□□ -0.27
HDLBP-214ENST00000427183 NBPF9Q3BBW0 867 aa13.33□□□□□ -0.27
HDLBP-214ENST00000427183 RARS2Q5T160 578 aaKnown RBP13.33□□□□□ -0.27
HDLBP-214ENST00000427183 THEMIS2Q5TEJ8 643 aa13.33□□□□□ -0.27
HDLBP-214ENST00000427183 USP17L2Q6R6M4 530 aa13.33□□□□□ -0.27
HDLBP-214ENST00000427183 BZW1Q7L1Q6 419 aaKnown RBP13.33□□□□□ -0.27
HDLBP-214ENST00000427183 NSUN7Q8NE18 718 aaKnown RBP13.33□□□□□ -0.27
HDLBP-214ENST00000427183 ZC3H15Q8WU90 426 aaKnown RBP13.33□□□□□ -0.27
HDLBP-214ENST00000427183 ENO1P06733 434 aaKnown RBP13.33□□□□□ -0.28
HDLBP-214ENST00000427183 CCNE1P24864 410 aa13.33□□□□□ -0.28
HDLBP-214ENST00000427183 AP1B1Q10567 949 aa13.33□□□□□ -0.28
HDLBP-214ENST00000427183 RABGAP1LQ5R372 815 aa13.33□□□□□ -0.28
HDLBP-214ENST00000427183 ARHGAP27Q6ZUM4 889 aa13.33□□□□□ -0.28
HDLBP-214ENST00000427183 KDELC2Q7Z4H8 507 aa13.33□□□□□ -0.28
HDLBP-214ENST00000427183 PANX2Q96RD6 677 aa13.33□□□□□ -0.28
HDLBP-214ENST00000427183 FAM49AQ9H0Q0 323 aaPredicted RBP13.33□□□□□ -0.28
HDLBP-214ENST00000427183 POLD4Q9HCU8 107 aa13.33□□□□□ -0.28
HDLBP-214ENST00000427183 COBLL1Q53SF7 1204 aa13.33□□□□□ -0.28
HDLBP-214ENST00000427183 SCN4BQ8IWT1 228 aa13.33□□□□□ -0.28
HDLBP-214ENST00000427183 FAM81BQ96LP2 452 aa13.33□□□□□ -0.28
HDLBP-214ENST00000427183 POLR3EQ9NVU0 708 aa13.33□□□□□ -0.28
HDLBP-214ENST00000427183 NFKBIL1Q9UBC1 381 aaPredicted RBP13.33□□□□□ -0.28
HDLBP-214ENST00000427183 DNAJC12Q9UKB3 198 aa13.33□□□□□ -0.28
HDLBP-214ENST00000427183 ZNF263O14978 683 aa13.33□□□□□ -0.28
HDLBP-214ENST00000427183 IMPDH2P12268 514 aa13.33□□□□□ -0.28
HDLBP-214ENST00000427183 RECQLP46063 649 aaPredicted RBP13.33□□□□□ -0.28
HDLBP-214ENST00000427183 AARS2Q5JTZ9 985 aaKnown RBP13.33□□□□□ -0.28
HDLBP-214ENST00000427183 ZBED8Q8IZ13 594 aa13.33□□□□□ -0.28
HDLBP-214ENST00000427183 TLR7Q9NYK1 1049 aaKnown RBP13.33□□□□□ -0.28
HDLBP-214ENST00000427183 SEL1LQ9UBV2 794 aa13.33□□□□□ -0.28
HDLBP-214ENST00000427183 CLTCQ00610 1675 aaKnown RBP13.33□□□□□ -0.28
HDLBP-214ENST00000427183 IL10P22301 178 aa13.33□□□□□ -0.28
HDLBP-214ENST00000427183 RPS6P62753 249 aaKnown RBP13.33□□□□□ -0.28
HDLBP-214ENST00000427183 LRRC74AQ0VAA2 488 aa13.33□□□□□ -0.28
HDLBP-214ENST00000427183 PDIA2Q13087 525 aaKnown RBP13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms