RNA–Protein interactions for RNA: ENST00000426840.1

LINC01049-201, Transcript of long intergenic non-protein coding RNA 1049, humanhuman

TSL 1 (best) BASIC

Gene LINC01049, Length 742 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01049-201ENST00000426840 KCNK18Q7Z418 384 aa8.27□□□□□ -1.09
LINC01049-201ENST00000426840 CABP7Q86V35 215 aa8.27□□□□□ -1.09
LINC01049-201ENST00000426840 KIAA0319LQ8IZA0 1049 aa8.27□□□□□ -1.09
LINC01049-201ENST00000426840 SNX29Q8TEQ0 813 aa8.27□□□□□ -1.09
LINC01049-201ENST00000426840 LRRC15Q8TF66 581 aa8.27□□□□□ -1.09
LINC01049-201ENST00000426840 DNAJB3Q8WWF6 145 aa8.27□□□□□ -1.09
LINC01049-201ENST00000426840 VWCEQ96DN2 955 aa8.27□□□□□ -1.09
LINC01049-201ENST00000426840 EPSTI1Q96J88 318 aa8.27□□□□□ -1.09
LINC01049-201ENST00000426840 PPP1R12CQ9BZL4 782 aa8.27□□□□□ -1.09
LINC01049-201ENST00000426840 CCSER1Q9C0I3 900 aa8.27□□□□□ -1.09
LINC01049-201ENST00000426840 HIPK3Q9H422 1215 aa8.27□□□□□ -1.09
LINC01049-201ENST00000426840 DHX33Q9H6R0 707 aaKnown RBP8.27□□□□□ -1.09
LINC01049-201ENST00000426840 PRDM5Q9NQX1 630 aaPredicted RBP8.27□□□□□ -1.09
LINC01049-201ENST00000426840 CYP26B1Q9NR63 512 aa8.27□□□□□ -1.09
LINC01049-201ENST00000426840 CHMP5Q9NZZ3 219 aa8.27□□□□□ -1.09
LINC01049-201ENST00000426840 TUBE1Q9UJT0 475 aa8.27□□□□□ -1.09
LINC01049-201ENST00000426840 DBR1Q9UK59 544 aaKnown RBP8.27□□□□□ -1.09
LINC01049-201ENST00000426840 PCDHA7Q9UN72 937 aa8.27□□□□□ -1.09
LINC01049-201ENST00000426840 KIAA1024Q9UPX6 916 aa8.27□□□□□ -1.09
LINC01049-201ENST00000426840 NOD1Q9Y239 953 aa8.27□□□□□ -1.09
LINC01049-201ENST00000426840 ATP6V1DQ9Y5K8 247 aa8.27□□□□□ -1.09
LINC01049-201ENST00000426840 MKI67P46013 3256 aaKnown RBP8.26□□□□□ -1.09
LINC01049-201ENST00000426840 E9PMD0 336 aa8.26□□□□□ -1.09
LINC01049-201ENST00000426840 RBAK-RBAKDNI3L0D1 243 aa8.26□□□□□ -1.09
LINC01049-201ENST00000426840 SLC26A4O43511 780 aa8.26□□□□□ -1.09
LINC01049-201ENST00000426840 CUTAO60888 179 aa8.26□□□□□ -1.09
LINC01049-201ENST00000426840 CHRNA1P02708 482 aa8.26□□□□□ -1.09
LINC01049-201ENST00000426840 IQCF3P0C7M6 154 aa8.26□□□□□ -1.09
LINC01049-201ENST00000426840 RAG1P15918 1043 aa8.26□□□□□ -1.09
LINC01049-201ENST00000426840 UBA7P41226 1012 aa8.26□□□□□ -1.09
LINC01049-201ENST00000426840 RARRES1P49788 294 aa8.26□□□□□ -1.09
LINC01049-201ENST00000426840 CCL23P55773 120 aa8.26□□□□□ -1.09
LINC01049-201ENST00000426840 KRT85P78386 507 aa8.26□□□□□ -1.09
LINC01049-201ENST00000426840 MGAT3Q09327 533 aa8.26□□□□□ -1.09
LINC01049-201ENST00000426840 BFSP2Q13515 415 aa8.26□□□□□ -1.09
LINC01049-201ENST00000426840 TMEM119Q4V9L6 283 aa8.26□□□□□ -1.09
LINC01049-201ENST00000426840 ZNF618Q5T7W0 954 aa8.26□□□□□ -1.09
LINC01049-201ENST00000426840 HAUS3Q68CZ6 603 aa8.26□□□□□ -1.09
LINC01049-201ENST00000426840 MFSD5Q6N075 450 aa8.26□□□□□ -1.09
LINC01049-201ENST00000426840 TAF2Q6P1X5 1199 aa8.26□□□□□ -1.09
LINC01049-201ENST00000426840 SHC4Q6S5L8 630 aa8.26□□□□□ -1.09
LINC01049-201ENST00000426840 CCDC116Q8IYX3 515 aa8.26□□□□□ -1.09
LINC01049-201ENST00000426840 NME8Q8N427 588 aa8.26□□□□□ -1.09
LINC01049-201ENST00000426840 KCTD17Q8N5Z5 321 aa8.26□□□□□ -1.09
LINC01049-201ENST00000426840 RETREG2Q8NC44 543 aa8.26□□□□□ -1.09
LINC01049-201ENST00000426840 CAGE1Q8TC20 777 aa8.26□□□□□ -1.09
LINC01049-201ENST00000426840 KCNG4Q8TDN1 519 aa8.26□□□□□ -1.09
LINC01049-201ENST00000426840 LEO1Q8WVC0 666 aaPredicted RBP8.26□□□□□ -1.09
LINC01049-201ENST00000426840 BADQ92934 168 aa8.26□□□□□ -1.09
LINC01049-201ENST00000426840 SCLYQ96I15 445 aa8.26□□□□□ -1.09
LINC01049-201ENST00000426840 CEP170P1Q96L14 293 aa8.26□□□□□ -1.09
LINC01049-201ENST00000426840 PLIN2Q99541 437 aa8.26□□□□□ -1.09
LINC01049-201ENST00000426840 KLF16Q9BXK1 252 aaPredicted RBP8.26□□□□□ -1.09
LINC01049-201ENST00000426840 OSBPL7Q9BZF2 842 aa8.26□□□□□ -1.09
LINC01049-201ENST00000426840 WNT8AQ9H1J5 351 aa8.26□□□□□ -1.09
LINC01049-201ENST00000426840 PRM3Q9NNZ6 103 aa8.26□□□□□ -1.09
LINC01049-201ENST00000426840 DDX19AQ9NUU7 478 aaKnown RBP8.26□□□□□ -1.09
LINC01049-201ENST00000426840 PRKAG2Q9UGJ0 569 aa8.26□□□□□ -1.09
LINC01049-201ENST00000426840 DNM3Q9UQ16 869 aa8.26□□□□□ -1.09
LINC01049-201ENST00000426840 PPME1Q9Y570 386 aa8.26□□□□□ -1.09
LINC01049-201ENST00000426840 CAND2O75155 1236 aa8.25□□□□□ -1.09
LINC01049-201ENST00000426840 EYA4O95677 639 aa8.25□□□□□ -1.09
LINC01049-201ENST00000426840 CSF2RAP15509 400 aa8.25□□□□□ -1.09
LINC01049-201ENST00000426840 SELPP16109 830 aa8.25□□□□□ -1.09
LINC01049-201ENST00000426840 THPOP40225 353 aa8.25□□□□□ -1.09
LINC01049-201ENST00000426840 CLCN3P51790 818 aa8.25□□□□□ -1.09
LINC01049-201ENST00000426840 EPHB4P54760 987 aa8.25□□□□□ -1.09
LINC01049-201ENST00000426840 TBC1D8BQ0IIM8 1120 aa8.25□□□□□ -1.09
LINC01049-201ENST00000426840 NR1H3Q13133 447 aa8.25□□□□□ -1.09
LINC01049-201ENST00000426840 DRP2Q13474 957 aa8.25□□□□□ -1.09
LINC01049-201ENST00000426840 MBTPS1Q14703 1052 aa8.25□□□□□ -1.09
LINC01049-201ENST00000426840 KARSQ15046 597 aaKnown RBP8.25□□□□□ -1.09
LINC01049-201ENST00000426840 INTS6LQ5JSJ4 861 aaKnown RBP8.25□□□□□ -1.09
LINC01049-201ENST00000426840 PPP1R26Q5T8A7 1209 aaPredicted RBP8.25□□□□□ -1.09
LINC01049-201ENST00000426840 LRRC8DQ7L1W4 858 aa8.25□□□□□ -1.09
LINC01049-201ENST00000426840 C16orf59Q7L2K0 433 aa8.25□□□□□ -1.09
LINC01049-201ENST00000426840 TRIM46Q7Z4K8 759 aa8.25□□□□□ -1.09
LINC01049-201ENST00000426840 LRRC71Q8N4P6 559 aa8.25□□□□□ -1.09
LINC01049-201ENST00000426840 CCDC155Q8N6L0 562 aa8.25□□□□□ -1.09
LINC01049-201ENST00000426840 SPATA32Q96LK8 384 aa8.25□□□□□ -1.09
LINC01049-201ENST00000426840 GDF15Q99988 308 aa8.25□□□□□ -1.09
LINC01049-201ENST00000426840 FAM49AQ9H0Q0 323 aaPredicted RBP8.25□□□□□ -1.09
LINC01049-201ENST00000426840 SUGCTQ9HAC7 445 aa8.25□□□□□ -1.09
LINC01049-201ENST00000426840 XPNPEP1Q9NQW7 623 aa8.25□□□□□ -1.09
LINC01049-201ENST00000426840 BLOC1S4Q9NUP1 217 aa8.25□□□□□ -1.09
LINC01049-201ENST00000426840 CDV3Q9UKY7 258 aaKnown RBP8.25□□□□□ -1.09
LINC01049-201ENST00000426840 TET1Q8NFU7 2136 aa8.24□□□□□ -1.09
LINC01049-201ENST00000426840 A0A087X0B3 334 aa8.24□□□□□ -1.09
LINC01049-201ENST00000426840 RSPH10B2B2RC85 870 aa8.24□□□□□ -1.09
LINC01049-201ENST00000426840 NBNO60934 754 aa8.24□□□□□ -1.09
LINC01049-201ENST00000426840 GPR32O75388 356 aa8.24□□□□□ -1.09
LINC01049-201ENST00000426840 CXCL10P02778 98 aa8.24□□□□□ -1.09
LINC01049-201ENST00000426840 VTNP04004 478 aa8.24□□□□□ -1.09
LINC01049-201ENST00000426840 RSPH10BP0C881 870 aa8.24□□□□□ -1.09
LINC01049-201ENST00000426840 CYP11B2P19099 503 aa8.24□□□□□ -1.09
LINC01049-201ENST00000426840 PLCG1P19174 1290 aa8.24□□□□□ -1.09
LINC01049-201ENST00000426840 NCLP19338 710 aaKnown RBP8.24□□□□□ -1.09
LINC01049-201ENST00000426840 TMOD1P28289 359 aa8.24□□□□□ -1.09
LINC01049-201ENST00000426840 ARL2P36404 184 aa8.24□□□□□ -1.09
LINC01049-201ENST00000426840 MAGEA10P43363 369 aaPredicted RBP8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms