RNA–Protein interactions for RNA: ENST00000425436.7

SHOX2-202, Transcript of short stature homeobox 2, humanhuman

TSL 5 BASIC

Gene SHOX2, Length 1,513 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-202ENST00000425436 PSMD2Q13200 908 aa17.21■□□□□ 0.35
SHOX2-202ENST00000425436 MCM6Q14566 821 aa17.21■□□□□ 0.35
SHOX2-202ENST00000425436 KLHL10Q6JEL2 608 aa17.21■□□□□ 0.35
SHOX2-202ENST00000425436 TMC6Q7Z403 805 aa17.21■□□□□ 0.35
SHOX2-202ENST00000425436 RSPH3Q86UC2 560 aa17.21■□□□□ 0.35
SHOX2-202ENST00000425436 KSR1Q8IVT5 923 aa17.21■□□□□ 0.35
SHOX2-202ENST00000425436 ADSSL1Q8N142 457 aa17.21■□□□□ 0.35
SHOX2-202ENST00000425436 CCDC155Q8N6L0 562 aa17.21■□□□□ 0.35
SHOX2-202ENST00000425436 LARP4BQ92615 738 aaKnown RBP17.21■□□□□ 0.35
SHOX2-202ENST00000425436 RAD54LQ92698 747 aa17.21■□□□□ 0.35
SHOX2-202ENST00000425436 OSBPL7Q9BZF2 842 aa17.21■□□□□ 0.35
SHOX2-202ENST00000425436 CDHR5Q9HBB8 845 aa17.21■□□□□ 0.35
SHOX2-202ENST00000425436 XPNPEP1Q9NQW7 623 aa17.21■□□□□ 0.35
SHOX2-202ENST00000425436 SUCLA2Q9P2R7 463 aaPredicted RBP17.21■□□□□ 0.35
SHOX2-202ENST00000425436 GINS2Q9Y248 185 aa17.21■□□□□ 0.35
SHOX2-202ENST00000425436 LOXHD1Q8IVV2 1947 aa17.21■□□□□ 0.35
SHOX2-202ENST00000425436 BICDL2A1A5D9 508 aa17.21■□□□□ 0.34
SHOX2-202ENST00000425436 RSPH10B2B2RC85 870 aa17.21■□□□□ 0.34
SHOX2-202ENST00000425436 PITPNM1O00562 1244 aa17.21■□□□□ 0.34
SHOX2-202ENST00000425436 DGAT1O75907 488 aa17.21■□□□□ 0.34
SHOX2-202ENST00000425436 RSPH10BP0C881 870 aa17.21■□□□□ 0.34
SHOX2-202ENST00000425436 SELPP16109 830 aa17.21■□□□□ 0.34
SHOX2-202ENST00000425436 SFPQP23246 707 aaKnown RBP eCLIP17.21■□□□□ 0.34
SHOX2-202ENST00000425436 DNM2P50570 870 aa17.21■□□□□ 0.34
SHOX2-202ENST00000425436 SLC12A3P55017 1021 aa17.21■□□□□ 0.34
SHOX2-202ENST00000425436 CDKAL1Q5VV42 579 aa17.21■□□□□ 0.34
SHOX2-202ENST00000425436 RINT1Q6NUQ1 792 aa17.21■□□□□ 0.34
SHOX2-202ENST00000425436 TRAF7Q6Q0C0 670 aa17.21■□□□□ 0.34
SHOX2-202ENST00000425436 LRRC8DQ7L1W4 858 aa17.21■□□□□ 0.34
SHOX2-202ENST00000425436 VSTM4Q8IW00 320 aa17.21■□□□□ 0.34
SHOX2-202ENST00000425436 SYT2Q8N9I0 419 aaPredicted RBP17.21■□□□□ 0.34
SHOX2-202ENST00000425436 CACTINQ8WUQ7 758 aaKnown RBP17.21■□□□□ 0.34
SHOX2-202ENST00000425436 NELFBQ8WX92 580 aa17.21■□□□□ 0.34
SHOX2-202ENST00000425436 RUSC1Q9BVN2 902 aa17.21■□□□□ 0.34
SHOX2-202ENST00000425436 ATP6V0A4Q9HBG4 840 aa17.21■□□□□ 0.34
SHOX2-202ENST00000425436 GPRC5CQ9NQ84 441 aa17.21■□□□□ 0.34
SHOX2-202ENST00000425436 PPME1Q9Y570 386 aa17.21■□□□□ 0.34
SHOX2-202ENST00000425436 CDY2AQ9Y6F7 541 aa17.21■□□□□ 0.34
SHOX2-202ENST00000425436 NPHP3-ACAD11A0A0J9YXS1 232 aa17.2■□□□□ 0.34
SHOX2-202ENST00000425436 LRRC10BA6NIK2 292 aa17.2■□□□□ 0.34
SHOX2-202ENST00000425436 CSF2RAP15509 400 aa17.2■□□□□ 0.34
SHOX2-202ENST00000425436 CYP11B2P19099 503 aa17.2■□□□□ 0.34
SHOX2-202ENST00000425436 NLRP11P59045 1033 aaKnown RBP17.2■□□□□ 0.34
SHOX2-202ENST00000425436 ASIC1P78348 528 aa17.2■□□□□ 0.34
SHOX2-202ENST00000425436 MRPS6P82932 125 aaKnown RBP17.2■□□□□ 0.34
SHOX2-202ENST00000425436 RBL2Q08999 1139 aa17.2■□□□□ 0.34
SHOX2-202ENST00000425436 RAD51AP2Q09MP3 1159 aa17.2■□□□□ 0.34
SHOX2-202ENST00000425436 KIZQ2M2Z5 673 aa17.2■□□□□ 0.34
SHOX2-202ENST00000425436 FAM102BQ5T8I3 360 aa17.2■□□□□ 0.34
SHOX2-202ENST00000425436 IER5Q5VY09 327 aa17.2■□□□□ 0.34
SHOX2-202ENST00000425436 MFSD5Q6N075 450 aa17.2■□□□□ 0.34
SHOX2-202ENST00000425436 UNC13DQ70J99 1090 aa17.2■□□□□ 0.34
SHOX2-202ENST00000425436 RPAINQ86UA6 219 aa17.2■□□□□ 0.34
SHOX2-202ENST00000425436 RHPN2Q8IUC4 686 aa17.2■□□□□ 0.34
SHOX2-202ENST00000425436 EXOC8Q8IYI6 725 aa17.2■□□□□ 0.34
SHOX2-202ENST00000425436 NME8Q8N427 588 aa17.2■□□□□ 0.34
SHOX2-202ENST00000425436 CCDC112Q8NEF3 446 aa17.2■□□□□ 0.34
SHOX2-202ENST00000425436 PRPF31Q8WWY3 499 aaKnown RBP17.2■□□□□ 0.34
SHOX2-202ENST00000425436 MED15Q96RN5 788 aa17.2■□□□□ 0.34
SHOX2-202ENST00000425436 MAP7D2Q96T17 732 aa17.2■□□□□ 0.34
SHOX2-202ENST00000425436 JPH2Q9BR39 696 aaPredicted RBP17.2■□□□□ 0.34
SHOX2-202ENST00000425436 CTNND2Q9UQB3 1225 aa17.2■□□□□ 0.34
SHOX2-202ENST00000425436 LTBP2Q14767 1821 aa17.19■□□□□ 0.34
SHOX2-202ENST00000425436 A0A1B0GTH6 734 aa17.19■□□□□ 0.34
SHOX2-202ENST00000425436 PRCPP42785 496 aa17.19■□□□□ 0.34
SHOX2-202ENST00000425436 KCNJ6P48051 423 aa17.19■□□□□ 0.34
SHOX2-202ENST00000425436 MGAT3Q09327 533 aa17.19■□□□□ 0.34
SHOX2-202ENST00000425436 MBTPS1Q14703 1052 aa17.19■□□□□ 0.34
SHOX2-202ENST00000425436 GPNMBQ14956 572 aa17.19■□□□□ 0.34
SHOX2-202ENST00000425436 NR1I3Q14994 352 aa17.19■□□□□ 0.34
SHOX2-202ENST00000425436 ARSHQ5FYA8 562 aa17.19■□□□□ 0.34
SHOX2-202ENST00000425436 C1orf186Q6ZWK4 172 aa17.19■□□□□ 0.34
SHOX2-202ENST00000425436 DEFB128Q7Z7B8 93 aa17.19■□□□□ 0.34
SHOX2-202ENST00000425436 CELF4Q9BZC1 486 aaKnown RBP17.19■□□□□ 0.34
SHOX2-202ENST00000425436 SAMSN1Q9NSI8 373 aaKnown RBP17.19■□□□□ 0.34
SHOX2-202ENST00000425436 GPR32O75388 356 aa17.18■□□□□ 0.34
SHOX2-202ENST00000425436 SRGAP2CP0DJJ0 459 aa17.18■□□□□ 0.34
SHOX2-202ENST00000425436 SKILP12757 684 aa17.18■□□□□ 0.34
SHOX2-202ENST00000425436 FAM26DQ5JW98 314 aa17.18■□□□□ 0.34
SHOX2-202ENST00000425436 SPECC1LQ69YQ0 1117 aa17.18■□□□□ 0.34
SHOX2-202ENST00000425436 GPBP1Q86WP2 473 aa17.18■□□□□ 0.34
SHOX2-202ENST00000425436 TMEM199Q8N511 208 aa17.18■□□□□ 0.34
SHOX2-202ENST00000425436 NAP1L5Q96NT1 182 aaPredicted RBP17.18■□□□□ 0.34
SHOX2-202ENST00000425436 LBHD1Q9BQE6 289 aaPredicted RBP17.18■□□□□ 0.34
SHOX2-202ENST00000425436 POLR3FQ9H1D9 316 aaPredicted RBP17.18■□□□□ 0.34
SHOX2-202ENST00000425436 LIMA1Q9UHB6 759 aaKnown RBP17.18■□□□□ 0.34
SHOX2-202ENST00000425436 TRPV2Q9Y5S1 764 aa17.18■□□□□ 0.34
SHOX2-202ENST00000425436 SIP14410 1827 aa17.18■□□□□ 0.34
SHOX2-202ENST00000425436 SFI1A8K8P3 1242 aa17.17■□□□□ 0.34
SHOX2-202ENST00000425436 M0QZ92 97 aa17.17■□□□□ 0.34
SHOX2-202ENST00000425436 NBNO60934 754 aa17.17■□□□□ 0.34
SHOX2-202ENST00000425436 CAND2O75155 1236 aa17.17■□□□□ 0.34
SHOX2-202ENST00000425436 ACRP10323 421 aa17.17■□□□□ 0.34
SHOX2-202ENST00000425436 ARL2P36404 184 aa17.17■□□□□ 0.34
SHOX2-202ENST00000425436 MAGEA10P43363 369 aaPredicted RBP17.17■□□□□ 0.34
SHOX2-202ENST00000425436 TERF1P54274 439 aa17.17■□□□□ 0.34
SHOX2-202ENST00000425436 STX17P56962 302 aa17.17■□□□□ 0.34
SHOX2-202ENST00000425436 LAMTOR4Q0VGL1 99 aa17.17■□□□□ 0.34
SHOX2-202ENST00000425436 FOXR2Q6PJQ5 311 aa17.17■□□□□ 0.34
SHOX2-202ENST00000425436 SMYD4Q8IYR2 804 aaPredicted RBP17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 97 ms