RNA–Protein interactions for RNA: ENST00000424270.6

SDCBP-203, Transcript of syndecan binding protein, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SDCBP, Length 1,277 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-203ENST00000424270 PRKCSHP14314 528 aaPredicted RBP7.24□□□□□ -1.25
SDCBP-203ENST00000424270 KLRC1P26715 233 aa7.24□□□□□ -1.25
SDCBP-203ENST00000424270 FAM189BP81408 668 aa7.24□□□□□ -1.25
SDCBP-203ENST00000424270 SATB1Q01826 763 aa7.24□□□□□ -1.25
SDCBP-203ENST00000424270 TRAF1Q13077 416 aa7.24□□□□□ -1.25
SDCBP-203ENST00000424270 PDAP1Q13442 181 aaKnown RBP7.24□□□□□ -1.25
SDCBP-203ENST00000424270 CLLU1OSQ5K130 101 aa7.24□□□□□ -1.25
SDCBP-203ENST00000424270 MTHFD1LQ6UB35 978 aa7.24□□□□□ -1.25
SDCBP-203ENST00000424270 GLB1LQ6UWU2 654 aa7.24□□□□□ -1.25
SDCBP-203ENST00000424270 FAM228AQ86W67 206 aa7.24□□□□□ -1.25
SDCBP-203ENST00000424270 TMEM173Q86WV6 379 aaPredicted RBP7.24□□□□□ -1.25
SDCBP-203ENST00000424270 ECHDC2Q86YB7 292 aa7.24□□□□□ -1.25
SDCBP-203ENST00000424270 PALB2Q86YC2 1186 aa7.24□□□□□ -1.25
SDCBP-203ENST00000424270 GLYCTKQ8IVS8 523 aa7.24□□□□□ -1.25
SDCBP-203ENST00000424270 PNMA1Q8ND90 353 aa7.24□□□□□ -1.25
SDCBP-203ENST00000424270 SMARCC2Q8TAQ2 1214 aa7.24□□□□□ -1.25
SDCBP-203ENST00000424270 TMEM40Q8WWA1 233 aa7.24□□□□□ -1.25
SDCBP-203ENST00000424270 CUL5Q93034 780 aa7.24□□□□□ -1.25
SDCBP-203ENST00000424270 CDHR1Q96JP9 859 aa7.24□□□□□ -1.25
SDCBP-203ENST00000424270 TTC14Q96N46 770 aa7.24□□□□□ -1.25
SDCBP-203ENST00000424270 INPP4AQ96PE3 977 aaPredicted RBP7.24□□□□□ -1.25
SDCBP-203ENST00000424270 IER2Q9BTL4 223 aa7.24□□□□□ -1.25
SDCBP-203ENST00000424270 ADAMTS10Q9H324 1103 aa7.24□□□□□ -1.25
SDCBP-203ENST00000424270 JMJD4Q9H9V9 463 aa7.24□□□□□ -1.25
SDCBP-203ENST00000424270 LMAN1LQ9HAT1 526 aa7.24□□□□□ -1.25
SDCBP-203ENST00000424270 CDHR5Q9HBB8 845 aa7.24□□□□□ -1.25
SDCBP-203ENST00000424270 ECHDC1Q9NTX5 307 aa7.24□□□□□ -1.25
SDCBP-203ENST00000424270 CDH7Q9ULB5 785 aa7.24□□□□□ -1.25
SDCBP-203ENST00000424270 GPSM3Q9Y4H4 160 aa7.24□□□□□ -1.25
SDCBP-203ENST00000424270 NEUROG3Q9Y4Z2 214 aa7.24□□□□□ -1.25
SDCBP-203ENST00000424270 COL4A3Q01955 1670 aa7.24□□□□□ -1.25
SDCBP-203ENST00000424270 GSTTP1A0A1W2PQM5 241 aa7.23□□□□□ -1.25
SDCBP-203ENST00000424270 BACH1O14867 736 aa7.23□□□□□ -1.25
SDCBP-203ENST00000424270 GAS2O43903 313 aaKnown RBP7.23□□□□□ -1.25
SDCBP-203ENST00000424270 SNHG28P0DPA3 235 aa7.23□□□□□ -1.25
SDCBP-203ENST00000424270 MPLP40238 635 aa7.23□□□□□ -1.25
SDCBP-203ENST00000424270 PSEN1P49768 467 aa7.23□□□□□ -1.25
SDCBP-203ENST00000424270 CRYBB1P53674 252 aaPredicted RBP7.23□□□□□ -1.25
SDCBP-203ENST00000424270 MRPS9P82933 396 aaKnown RBP7.23□□□□□ -1.25
SDCBP-203ENST00000424270 UAP1L1Q3KQV9 507 aa7.23□□□□□ -1.25
SDCBP-203ENST00000424270 TCEAL6Q6IPX3 200 aa7.23□□□□□ -1.25
SDCBP-203ENST00000424270 MFSD6Q6ZSS7 791 aa7.23□□□□□ -1.25
SDCBP-203ENST00000424270 TRMT1LQ7Z2T5 733 aaKnown RBP7.23□□□□□ -1.25
SDCBP-203ENST00000424270 GRASPQ7Z6J2 395 aaPredicted RBP7.23□□□□□ -1.25
SDCBP-203ENST00000424270 ZNF605Q86T29 641 aa7.23□□□□□ -1.25
SDCBP-203ENST00000424270 CKAP2LQ8IYA6 745 aa7.23□□□□□ -1.25
SDCBP-203ENST00000424270 SAMD3Q8N6K7 520 aa7.23□□□□□ -1.25
SDCBP-203ENST00000424270 URGCPQ8TCY9 931 aa7.23□□□□□ -1.25
SDCBP-203ENST00000424270 TCEAL3Q969E4 200 aa7.23□□□□□ -1.25
SDCBP-203ENST00000424270 SENP7Q9BQF6 1050 aa7.23□□□□□ -1.25
SDCBP-203ENST00000424270 TMEM121BQ9BXQ6 578 aaPredicted RBP7.23□□□□□ -1.25
SDCBP-203ENST00000424270 NT5C3AQ9H0P0 336 aa7.23□□□□□ -1.25
SDCBP-203ENST00000424270 CHRDQ9H2X0 955 aa7.23□□□□□ -1.25
SDCBP-203ENST00000424270 OCEL1Q9H607 264 aa7.23□□□□□ -1.25
SDCBP-203ENST00000424270 TCP11L1Q9NUJ3 509 aa7.23□□□□□ -1.25
SDCBP-203ENST00000424270 RNF19AQ9NV58 838 aa7.23□□□□□ -1.25
SDCBP-203ENST00000424270 AKT3Q9Y243 479 aa7.23□□□□□ -1.25
SDCBP-203ENST00000424270 KAT6AQ92794 2004 aa7.23□□□□□ -1.25
SDCBP-203ENST00000424270 IGF2RP11717 2491 aa7.23□□□□□ -1.25
SDCBP-203ENST00000424270 ZZEF1O43149 2961 aa7.22□□□□□ -1.25
SDCBP-203ENST00000424270 ZBTB5O15062 677 aa7.22□□□□□ -1.25
SDCBP-203ENST00000424270 TEX28O15482 410 aa7.22□□□□□ -1.25
SDCBP-203ENST00000424270 RPP40O75818 363 aaKnown RBP7.22□□□□□ -1.25
SDCBP-203ENST00000424270 VTNP04004 478 aa7.22□□□□□ -1.25
SDCBP-203ENST00000424270 PRB1P04280 392 aa7.22□□□□□ -1.25
SDCBP-203ENST00000424270 GALTP07902 379 aa7.22□□□□□ -1.25
SDCBP-203ENST00000424270 TDGF1P13385 188 aa7.22□□□□□ -1.25
SDCBP-203ENST00000424270 CEACAM1P13688 526 aa7.22□□□□□ -1.25
SDCBP-203ENST00000424270 NOVP48745 357 aa7.22□□□□□ -1.25
SDCBP-203ENST00000424270 STAT5BP51692 787 aa7.22□□□□□ -1.25
SDCBP-203ENST00000424270 HAND2P61296 217 aa7.22□□□□□ -1.25
SDCBP-203ENST00000424270 TROAPQ12815 778 aa7.22□□□□□ -1.25
SDCBP-203ENST00000424270 SEMA3FQ13275 785 aa7.22□□□□□ -1.25
SDCBP-203ENST00000424270 MTMR1Q13613 665 aa7.22□□□□□ -1.25
SDCBP-203ENST00000424270 NOMO2Q5JPE7 1267 aa7.22□□□□□ -1.25
SDCBP-203ENST00000424270 LIN9Q5TKA1 542 aa7.22□□□□□ -1.25
SDCBP-203ENST00000424270 LARP1BQ659C4 914 aaKnown RBP7.22□□□□□ -1.25
SDCBP-203ENST00000424270 CACNA2D4Q7Z3S7 1137 aa7.22□□□□□ -1.25
SDCBP-203ENST00000424270 IQCA1Q86XH1 822 aa7.22□□□□□ -1.25
SDCBP-203ENST00000424270 PROSER1Q86XN7 944 aa7.22□□□□□ -1.25
SDCBP-203ENST00000424270 FAM200AQ8TCP9 573 aa7.22□□□□□ -1.25
SDCBP-203ENST00000424270 BCL7CQ8WUZ0 217 aaPredicted RBP7.22□□□□□ -1.25
SDCBP-203ENST00000424270 FAM3CQ92520 227 aa7.22□□□□□ -1.25
SDCBP-203ENST00000424270 ESR2Q92731 530 aa7.22□□□□□ -1.25
SDCBP-203ENST00000424270 BBC3Q96PG8 261 aaPredicted RBP7.22□□□□□ -1.25
SDCBP-203ENST00000424270 PRKD2Q9BZL6 878 aa7.22□□□□□ -1.25
SDCBP-203ENST00000424270 PLEKHA4Q9H4M7 779 aa7.22□□□□□ -1.25
SDCBP-203ENST00000424270 SLC32A1Q9H598 525 aa7.22□□□□□ -1.25
SDCBP-203ENST00000424270 BRD9Q9H8M2 597 aa7.22□□□□□ -1.25
SDCBP-203ENST00000424270 JPH1Q9HDC5 661 aaPredicted RBP7.22□□□□□ -1.25
SDCBP-203ENST00000424270 VPS45Q9NRW7 570 aa7.22□□□□□ -1.25
SDCBP-203ENST00000424270 ZDHHC7Q9NXF8 308 aa7.22□□□□□ -1.25
SDCBP-203ENST00000424270 DACT1Q9NYF0 836 aa7.22□□□□□ -1.25
SDCBP-203ENST00000424270 KLK13Q9UKR3 277 aa7.22□□□□□ -1.25
SDCBP-203ENST00000424270 FAN1Q9Y2M0 1017 aa7.22□□□□□ -1.25
SDCBP-203ENST00000424270 MSRB2Q9Y3D2 182 aa7.22□□□□□ -1.25
SDCBP-203ENST00000424270 LOXHD1Q8IVV2 1947 aa7.21□□□□□ -1.25
SDCBP-203ENST00000424270 C2orf16Q68DN1 1984 aa7.21□□□□□ -1.26
SDCBP-203ENST00000424270 SHISA7A6NL88 538 aa7.21□□□□□ -1.26
SDCBP-203ENST00000424270 OPLAHO14841 1288 aa7.21□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms