RNA–Protein interactions for RNA: ENST00000423960.1

FOXN4-203, Transcript of forkhead box N4, humanhuman

TSL 1 (best)

Gene FOXN4, Length 1,219 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN4-203ENST00000423960 TMEM240Q5SV17 173 aa18.78■□□□□ 0.6
FOXN4-203ENST00000423960 CNKSR3Q6P9H4 555 aa18.78■□□□□ 0.6
FOXN4-203ENST00000423960 KRBA2Q6ZNG9 492 aa18.78■□□□□ 0.6
FOXN4-203ENST00000423960 ZNF365Q70YC5 407 aa18.78■□□□□ 0.6
FOXN4-203ENST00000423960 FAM228AQ86W67 206 aa18.78■□□□□ 0.6
FOXN4-203ENST00000423960 IFNLR1Q8IU57 520 aaPredicted RBP18.78■□□□□ 0.6
FOXN4-203ENST00000423960 ZBTB8OSQ8IWT0 167 aa18.78■□□□□ 0.6
FOXN4-203ENST00000423960 MYCT1Q8N699 235 aa18.78■□□□□ 0.6
FOXN4-203ENST00000423960 APBB2Q92870 758 aa18.78■□□□□ 0.6
FOXN4-203ENST00000423960 NTPCRQ9BSD7 190 aaKnown RBP18.78■□□□□ 0.6
FOXN4-203ENST00000423960 TRIM9Q9C026 710 aa18.78■□□□□ 0.6
FOXN4-203ENST00000423960 C2orf40Q9H1Z8 148 aa18.78■□□□□ 0.6
FOXN4-203ENST00000423960 PARVGQ9HBI0 331 aa18.78■□□□□ 0.6
FOXN4-203ENST00000423960 MTMR10Q9NXD2 777 aa18.78■□□□□ 0.6
FOXN4-203ENST00000423960 ST3GAL5Q9UNP4 418 aa18.78■□□□□ 0.6
FOXN4-203ENST00000423960 LOXHD1Q8IVV2 1947 aa18.78■□□□□ 0.6
FOXN4-203ENST00000423960 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP18.77■□□□□ 0.6
FOXN4-203ENST00000423960 RBAK-RBAKDNI3L0D1 243 aa18.77■□□□□ 0.6
FOXN4-203ENST00000423960 ACTN1P12814 892 aa18.77■□□□□ 0.6
FOXN4-203ENST00000423960 IDEP14735 1019 aa18.77■□□□□ 0.6
FOXN4-203ENST00000423960 LIG1P18858 919 aa18.77■□□□□ 0.6
FOXN4-203ENST00000423960 FGFR4P22455 802 aa18.77■□□□□ 0.6
FOXN4-203ENST00000423960 ZNF131P52739 623 aa18.77■□□□□ 0.6
FOXN4-203ENST00000423960 SMTNP53814 917 aa18.77■□□□□ 0.6
FOXN4-203ENST00000423960 KANK3Q6NY19 840 aa18.77■□□□□ 0.6
FOXN4-203ENST00000423960 CNNM4Q6P4Q7 775 aa18.77■□□□□ 0.6
FOXN4-203ENST00000423960 PSRC1Q6PGN9 363 aaPredicted RBP18.77■□□□□ 0.6
FOXN4-203ENST00000423960 GRAMD1CQ8IYS0 662 aa18.77■□□□□ 0.6
FOXN4-203ENST00000423960 SPIRE2Q8WWL2 714 aa18.77■□□□□ 0.6
FOXN4-203ENST00000423960 CCDC34Q96HJ3 373 aa18.77■□□□□ 0.6
FOXN4-203ENST00000423960 MINDY3Q9H8M7 445 aa18.77■□□□□ 0.6
FOXN4-203ENST00000423960 ERVK-5Q9HDB9 667 aa18.77■□□□□ 0.6
FOXN4-203ENST00000423960 KMT5AQ9NQR1 393 aa18.77■□□□□ 0.6
FOXN4-203ENST00000423960 INO80B-WBP1J3KQ70 363 aa18.76■□□□□ 0.59
FOXN4-203ENST00000423960 NR1I2O75469 434 aa18.76■□□□□ 0.59
FOXN4-203ENST00000423960 SFPQP23246 707 aaKnown RBP eCLIP18.76■□□□□ 0.59
FOXN4-203ENST00000423960 SMAD3P84022 425 aaKnown RBP18.76■□□□□ 0.59
FOXN4-203ENST00000423960 IKBKEQ14164 716 aa18.76■□□□□ 0.59
FOXN4-203ENST00000423960 CDCA2Q69YH5 1023 aaPredicted RBP18.76■□□□□ 0.59
FOXN4-203ENST00000423960 FAM43BQ6ZT52 329 aaPredicted RBP18.76■□□□□ 0.59
FOXN4-203ENST00000423960 CATSPER4Q7RTX7 472 aa18.76■□□□□ 0.59
FOXN4-203ENST00000423960 CCDC65Q8IXS2 484 aa18.76■□□□□ 0.59
FOXN4-203ENST00000423960 BLZF1Q9H2G9 400 aa18.76■□□□□ 0.59
FOXN4-203ENST00000423960 LMBRD1Q9NUN5 540 aa18.76■□□□□ 0.59
FOXN4-203ENST00000423960 PANK4Q9NVE7 773 aa18.76■□□□□ 0.59
FOXN4-203ENST00000423960 ABHD14A-ACY1A0A1B0GW23 586 aa18.75■□□□□ 0.59
FOXN4-203ENST00000423960 SLC16A4O15374 487 aa18.75■□□□□ 0.59
FOXN4-203ENST00000423960 GAP43P17677 238 aa18.75■□□□□ 0.59
FOXN4-203ENST00000423960 CASP1P29466 404 aa18.75■□□□□ 0.59
FOXN4-203ENST00000423960 EFNA5P52803 228 aa18.75■□□□□ 0.59
FOXN4-203ENST00000423960 ASIC1P78348 528 aa18.75■□□□□ 0.59
FOXN4-203ENST00000423960 MBTD1Q05BQ5 628 aa18.75■□□□□ 0.59
FOXN4-203ENST00000423960 CUL4BQ13620 913 aa18.75■□□□□ 0.59
FOXN4-203ENST00000423960 PCBP1Q15365 356 aaKnown RBP eCLIP18.75■□□□□ 0.59
FOXN4-203ENST00000423960 TCTN1Q2MV58 587 aa18.75■□□□□ 0.59
FOXN4-203ENST00000423960 ZNF697Q5TEC3 545 aa18.75■□□□□ 0.59
FOXN4-203ENST00000423960 FAM109BQ6ICB4 259 aaPredicted RBP18.75■□□□□ 0.59
FOXN4-203ENST00000423960 OTOP2Q7RTS6 562 aa18.75■□□□□ 0.59
FOXN4-203ENST00000423960 TIGD1Q96MW7 591 aa18.75■□□□□ 0.59
FOXN4-203ENST00000423960 KIFC3Q9BVG8 833 aa18.75■□□□□ 0.59
FOXN4-203ENST00000423960 FTHL17Q9BXU8 183 aa18.75■□□□□ 0.59
FOXN4-203ENST00000423960 SEL1LQ9UBV2 794 aa18.75■□□□□ 0.59
FOXN4-203ENST00000423960 FRMD3A2A2Y4 597 aa18.74■□□□□ 0.59
FOXN4-203ENST00000423960 K7ERI5 159 aa18.74■□□□□ 0.59
FOXN4-203ENST00000423960 GTPBP6O43824 516 aaPredicted RBP18.74■□□□□ 0.59
FOXN4-203ENST00000423960 TRAK2O60296 914 aa18.74■□□□□ 0.59
FOXN4-203ENST00000423960 KINO60870 393 aaKnown RBP18.74■□□□□ 0.59
FOXN4-203ENST00000423960 MYL1P05976 194 aa18.74■□□□□ 0.59
FOXN4-203ENST00000423960 NCBP1Q09161 790 aaKnown RBP18.74■□□□□ 0.59
FOXN4-203ENST00000423960 HERC4Q5GLZ8 1057 aaPredicted RBP18.74■□□□□ 0.59
FOXN4-203ENST00000423960 FAM178BQ8IXR5 827 aa18.74■□□□□ 0.59
FOXN4-203ENST00000423960 HERVK_113Q902F9 699 aa18.74■□□□□ 0.59
FOXN4-203ENST00000423960 TMX1Q9H3N1 280 aa18.74■□□□□ 0.59
FOXN4-203ENST00000423960 FZD8Q9H461 694 aa18.74■□□□□ 0.59
FOXN4-203ENST00000423960 TMEM134Q9H6X4 195 aa18.74■□□□□ 0.59
FOXN4-203ENST00000423960 PRMT7Q9NVM4 692 aaPredicted RBP18.74■□□□□ 0.59
FOXN4-203ENST00000423960 ARHGAP28Q9P2N2 729 aa18.74■□□□□ 0.59
FOXN4-203ENST00000423960 ADGRA3Q8IWK6 1321 aa18.74■□□□□ 0.59
FOXN4-203ENST00000423960 PVALEFA0A1B0GWK0 134 aa18.73■□□□□ 0.59
FOXN4-203ENST00000423960 H0YCG3 227 aa18.73■□□□□ 0.59
FOXN4-203ENST00000423960 EFCAB14O75071 495 aa18.73■□□□□ 0.59
FOXN4-203ENST00000423960 BAIAP3O94812 1187 aa18.73■□□□□ 0.59
FOXN4-203ENST00000423960 ERLIN2O94905 339 aa18.73■□□□□ 0.59
FOXN4-203ENST00000423960 ZSCAN20P17040 1043 aaPredicted RBP18.73■□□□□ 0.59
FOXN4-203ENST00000423960 NCKAP1LP55160 1127 aa18.73■□□□□ 0.59
FOXN4-203ENST00000423960 MAPK6Q16659 721 aa18.73■□□□□ 0.59
FOXN4-203ENST00000423960 UNC13DQ70J99 1090 aa18.73■□□□□ 0.59
FOXN4-203ENST00000423960 SFR1Q86XK3 245 aa18.73■□□□□ 0.59
FOXN4-203ENST00000423960 SLC17A8Q8NDX2 589 aa18.73■□□□□ 0.59
FOXN4-203ENST00000423960 TMEM161BQ8NDZ6 487 aa18.73■□□□□ 0.59
FOXN4-203ENST00000423960 GUCD1Q96NT3 240 aa18.73■□□□□ 0.59
FOXN4-203ENST00000423960 MTIF3Q9H2K0 278 aaKnown RBP18.73■□□□□ 0.59
FOXN4-203ENST00000423960 CHST12Q9NRB3 414 aa18.73■□□□□ 0.59
FOXN4-203ENST00000423960 DACT1Q9NYF0 836 aa18.73■□□□□ 0.59
FOXN4-203ENST00000423960 TANC1Q9C0D5 1861 aa18.73■□□□□ 0.59
FOXN4-203ENST00000423960 PHLPP2Q6ZVD8 1323 aa18.73■□□□□ 0.59
FOXN4-203ENST00000423960 SCN5AQ14524 2016 aa18.73■□□□□ 0.59
FOXN4-203ENST00000423960 HSFX4A0A1B0GTS1 333 aaPredicted RBP18.72■□□□□ 0.59
FOXN4-203ENST00000423960 HSFX3A0A1B0GWH4 333 aaPredicted RBP18.72■□□□□ 0.59
FOXN4-203ENST00000423960 DENND3A2RUS2 1198 aa18.72■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms