RNA–Protein interactions for RNA: ENST00000423698.6

ERCC1-204, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 2 BASIC

Gene ERCC1, Length 3,119 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-204ENST00000423698 ZNF233A6NK53 670 aa12.75□□□□□ -0.37
ERCC1-204ENST00000423698 CCDC169A6NNP5 214 aa12.75□□□□□ -0.37
ERCC1-204ENST00000423698 GOLGA8KD6RF30 607 aa12.75□□□□□ -0.37
ERCC1-204ENST00000423698 IPO5O00410 1097 aaKnown RBP12.75□□□□□ -0.37
ERCC1-204ENST00000423698 HGSO14964 777 aaPredicted RBP12.75□□□□□ -0.37
ERCC1-204ENST00000423698 BUB1BO60566 1050 aaPredicted RBP12.75□□□□□ -0.37
ERCC1-204ENST00000423698 MCM3P25205 808 aa12.75□□□□□ -0.37
ERCC1-204ENST00000423698 MARCKSL1P49006 195 aa12.75□□□□□ -0.37
ERCC1-204ENST00000423698 SNX1Q13596 522 aa12.75□□□□□ -0.37
ERCC1-204ENST00000423698 UBAP2Q5T6F2 1119 aaKnown RBP12.75□□□□□ -0.37
ERCC1-204ENST00000423698 MEI1Q5TIA1 1274 aa12.75□□□□□ -0.37
ERCC1-204ENST00000423698 DEFB132Q7Z7B7 95 aa12.75□□□□□ -0.37
ERCC1-204ENST00000423698 LDHDQ86WU2 507 aa12.75□□□□□ -0.37
ERCC1-204ENST00000423698 IFT20Q8IY31 132 aa12.75□□□□□ -0.37
ERCC1-204ENST00000423698 ZNF513Q8N8E2 541 aaPredicted RBP12.75□□□□□ -0.37
ERCC1-204ENST00000423698 LNX1Q8TBB1 728 aaPredicted RBP12.75□□□□□ -0.37
ERCC1-204ENST00000423698 ZBTB10Q96DT7 871 aa12.75□□□□□ -0.37
ERCC1-204ENST00000423698 VCPKMTQ9H867 229 aa12.75□□□□□ -0.37
ERCC1-204ENST00000423698 COL20A1Q9P218 1284 aa12.75□□□□□ -0.37
ERCC1-204ENST00000423698 CCPG1Q9ULG6 757 aa12.75□□□□□ -0.37
ERCC1-204ENST00000423698 PLAAQ9Y263 795 aa12.75□□□□□ -0.37
ERCC1-204ENST00000423698 TARSL2A2RTX5 802 aaKnown RBP12.75□□□□□ -0.37
ERCC1-204ENST00000423698 TESPA1A2RU30 521 aaPredicted RBP12.75□□□□□ -0.37
ERCC1-204ENST00000423698 SLC16A4O15374 487 aa12.75□□□□□ -0.37
ERCC1-204ENST00000423698 SART1O43290 800 aaKnown RBP12.75□□□□□ -0.37
ERCC1-204ENST00000423698 AP1G2O75843 785 aa12.75□□□□□ -0.37
ERCC1-204ENST00000423698 KIF4AO95239 1232 aa12.75□□□□□ -0.37
ERCC1-204ENST00000423698 H2AFZP0C0S5 128 aa12.75□□□□□ -0.37
ERCC1-204ENST00000423698 MYO1EQ12965 1108 aa12.75□□□□□ -0.37
ERCC1-204ENST00000423698 LLGL2Q6P1M3 1020 aa12.75□□□□□ -0.37
ERCC1-204ENST00000423698 H2AFVQ71UI9 128 aa12.75□□□□□ -0.37
ERCC1-204ENST00000423698 PNMA8AQ86V59 439 aaPredicted RBP12.75□□□□□ -0.37
ERCC1-204ENST00000423698 SLC35G2Q8TBE7 412 aa12.75□□□□□ -0.37
ERCC1-204ENST00000423698 AKT1S1Q96B36 256 aa12.75□□□□□ -0.37
ERCC1-204ENST00000423698 LUC7LQ9NQ29 371 aaKnown RBP12.75□□□□□ -0.37
ERCC1-204ENST00000423698 TOPORSQ9NS56 1045 aaPredicted RBP12.75□□□□□ -0.37
ERCC1-204ENST00000423698 TCEAL9Q9UHQ7 104 aa12.75□□□□□ -0.37
ERCC1-204ENST00000423698 GGT7Q9UJ14 662 aa12.75□□□□□ -0.37
ERCC1-204ENST00000423698 RPS6KL1Q9Y6S9 549 aa12.75□□□□□ -0.37
ERCC1-204ENST00000423698 ASTN2O75129 1339 aaPredicted RBP12.74□□□□□ -0.37
ERCC1-204ENST00000423698 DCDC2CA8MYV0 355 aa12.74□□□□□ -0.37
ERCC1-204ENST00000423698 CYP3A4P08684 503 aa12.74□□□□□ -0.37
ERCC1-204ENST00000423698 EZRP15311 586 aaKnown RBP12.74□□□□□ -0.37
ERCC1-204ENST00000423698 NR1D1P20393 614 aa12.74□□□□□ -0.37
ERCC1-204ENST00000423698 STAT1P42224 750 aa12.74□□□□□ -0.37
ERCC1-204ENST00000423698 EPHB4P54760 987 aa12.74□□□□□ -0.37
ERCC1-204ENST00000423698 HS2ST1Q7LGA3 356 aa12.74□□□□□ -0.37
ERCC1-204ENST00000423698 OGFOD1Q8N543 542 aa12.74□□□□□ -0.37
ERCC1-204ENST00000423698 TCP11Q8WWU5 503 aa12.74□□□□□ -0.37
ERCC1-204ENST00000423698 RPGRIP1Q96KN7 1286 aa12.74□□□□□ -0.37
ERCC1-204ENST00000423698 SIX2Q9NPC8 291 aa12.74□□□□□ -0.37
ERCC1-204ENST00000423698 TYW1Q9NV66 732 aaKnown RBP12.74□□□□□ -0.37
ERCC1-204ENST00000423698 PLIN4Q96Q06 1357 aa12.74□□□□□ -0.37
ERCC1-204ENST00000423698 IGLV3-22A0A075B6J6 115 aa12.74□□□□□ -0.37
ERCC1-204ENST00000423698 PPP1R37O75864 691 aa12.74□□□□□ -0.37
ERCC1-204ENST00000423698 GJC1P36383 396 aa12.74□□□□□ -0.37
ERCC1-204ENST00000423698 MESDQ14696 234 aa12.74□□□□□ -0.37
ERCC1-204ENST00000423698 FUKQ8N0W3 1084 aa12.74□□□□□ -0.37
ERCC1-204ENST00000423698 PPM1KQ8N3J5 372 aa12.74□□□□□ -0.37
ERCC1-204ENST00000423698 USP38Q8NB14 1042 aa12.74□□□□□ -0.37
ERCC1-204ENST00000423698 SLC30A5Q8TAD4 765 aa12.74□□□□□ -0.37
ERCC1-204ENST00000423698 PARD3BQ8TEW8 1205 aa12.74□□□□□ -0.37
ERCC1-204ENST00000423698 STAMBPL1Q96FJ0 436 aa12.74□□□□□ -0.37
ERCC1-204ENST00000423698 EPN3Q9H201 632 aa12.74□□□□□ -0.37
ERCC1-204ENST00000423698 FRMD4BQ9Y2L6 1034 aa12.74□□□□□ -0.37
ERCC1-204ENST00000423698 SCN9AQ15858 1988 aa12.74□□□□□ -0.37
ERCC1-204ENST00000423698 RASSF9O75901 435 aa12.73□□□□□ -0.37
ERCC1-204ENST00000423698 EYA4O95677 639 aa12.73□□□□□ -0.37
ERCC1-204ENST00000423698 GNA14O95837 355 aa12.73□□□□□ -0.37
ERCC1-204ENST00000423698 DLATP10515 647 aaKnown RBP12.73□□□□□ -0.37
ERCC1-204ENST00000423698 ITGB5P18084 799 aa12.73□□□□□ -0.37
ERCC1-204ENST00000423698 RPL13P26373 211 aaKnown RBP12.73□□□□□ -0.37
ERCC1-204ENST00000423698 PEX3P56589 373 aa12.73□□□□□ -0.37
ERCC1-204ENST00000423698 TUBB4BP68371 445 aa12.73□□□□□ -0.37
ERCC1-204ENST00000423698 IRX1P78414 480 aaPredicted RBP12.73□□□□□ -0.37
ERCC1-204ENST00000423698 SETDB1Q15047 1291 aa12.73□□□□□ -0.37
ERCC1-204ENST00000423698 PTGISQ16647 500 aa12.73□□□□□ -0.37
ERCC1-204ENST00000423698 CEP55Q53EZ4 464 aa12.73□□□□□ -0.37
ERCC1-204ENST00000423698 FAM102BQ5T8I3 360 aa12.73□□□□□ -0.37
ERCC1-204ENST00000423698 PHLDB3Q6NSJ2 640 aa12.73□□□□□ -0.37
ERCC1-204ENST00000423698 TATDN1Q6P1N9 297 aa12.73□□□□□ -0.37
ERCC1-204ENST00000423698 ARHGEF19Q8IW93 802 aa12.73□□□□□ -0.37
ERCC1-204ENST00000423698 PI4K2AQ9BTU6 479 aa12.73□□□□□ -0.37
ERCC1-204ENST00000423698 OSBPL7Q9BZF2 842 aa12.73□□□□□ -0.37
ERCC1-204ENST00000423698 ARHGEF10LQ9HCE6 1279 aa12.73□□□□□ -0.37
ERCC1-204ENST00000423698 ATP8A1Q9Y2Q0 1164 aa12.73□□□□□ -0.37
ERCC1-204ENST00000423698 EMSYQ7Z589 1322 aa12.73□□□□□ -0.37
ERCC1-204ENST00000423698 MYO3BQ8WXR4 1341 aa12.73□□□□□ -0.37
ERCC1-204ENST00000423698 UBR3Q6ZT12 1888 aa12.73□□□□□ -0.37
ERCC1-204ENST00000423698 FLOT1O75955 427 aa12.73□□□□□ -0.37
ERCC1-204ENST00000423698 LCA5LO95447 670 aa12.73□□□□□ -0.37
ERCC1-204ENST00000423698 CLTAP09496 248 aa12.73□□□□□ -0.37
ERCC1-204ENST00000423698 SLCO1A2P46721 670 aa12.73□□□□□ -0.37
ERCC1-204ENST00000423698 SMTNP53814 917 aa12.73□□□□□ -0.37
ERCC1-204ENST00000423698 AP3B2Q13367 1082 aa12.73□□□□□ -0.37
ERCC1-204ENST00000423698 CCDC25Q86WR0 208 aa12.73□□□□□ -0.37
ERCC1-204ENST00000423698 TPCN2Q8NHX9 752 aa12.73□□□□□ -0.37
ERCC1-204ENST00000423698 WNK4Q96J92 1243 aa12.73□□□□□ -0.37
ERCC1-204ENST00000423698 INPP4AQ96PE3 977 aaPredicted RBP12.73□□□□□ -0.37
ERCC1-204ENST00000423698 AGPAT3Q9NRZ7 376 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms