RNA–Protein interactions for RNA: ENST00000423636.6

PTPRN-204, Transcript of protein tyrosine phosphatase, receptor type N, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PTPRN, Length 3,313 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN-204ENST00000423636 QSER1Q2KHR3 1735 aa12.96□□□□□ -0.34
PTPRN-204ENST00000423636 ADGRA3Q8IWK6 1321 aa12.96□□□□□ -0.34
PTPRN-204ENST00000423636 DOCK5Q9H7D0 1870 aa12.95□□□□□ -0.34
PTPRN-204ENST00000423636 SMIM23A6NLE4 172 aa12.95□□□□□ -0.34
PTPRN-204ENST00000423636 RGS20O76081 388 aa12.95□□□□□ -0.34
PTPRN-204ENST00000423636 GJB6O95452 261 aa12.95□□□□□ -0.34
PTPRN-204ENST00000423636 KRT5P13647 590 aa12.95□□□□□ -0.34
PTPRN-204ENST00000423636 TNFAIP3P21580 790 aa12.95□□□□□ -0.34
PTPRN-204ENST00000423636 TTLL12Q14166 644 aaPredicted RBP12.95□□□□□ -0.34
PTPRN-204ENST00000423636 MESDQ14696 234 aa12.95□□□□□ -0.34
PTPRN-204ENST00000423636 TNIP1Q15025 636 aa12.95□□□□□ -0.34
PTPRN-204ENST00000423636 CCDC60Q8IWA6 550 aaPredicted RBP12.95□□□□□ -0.34
PTPRN-204ENST00000423636 POMGNT1Q8WZA1 660 aa12.95□□□□□ -0.34
PTPRN-204ENST00000423636 ARL8AQ96BM9 186 aa12.95□□□□□ -0.34
PTPRN-204ENST00000423636 TRIM7Q9C029 511 aa12.95□□□□□ -0.34
PTPRN-204ENST00000423636 LRRC4CQ9HCJ2 640 aa12.95□□□□□ -0.34
PTPRN-204ENST00000423636 LARSQ9P2J5 1176 aaKnown RBP12.95□□□□□ -0.34
PTPRN-204ENST00000423636 GREB1LQ9C091 1923 aaPredicted RBP12.95□□□□□ -0.34
PTPRN-204ENST00000423636 SYF2O95926 243 aaKnown RBP12.95□□□□□ -0.34
PTPRN-204ENST00000423636 H2AFZP0C0S5 128 aa12.95□□□□□ -0.34
PTPRN-204ENST00000423636 KRT13P13646 458 aa12.95□□□□□ -0.34
PTPRN-204ENST00000423636 PTPRAP18433 802 aa12.95□□□□□ -0.34
PTPRN-204ENST00000423636 ADSSP30520 456 aa12.95□□□□□ -0.34
PTPRN-204ENST00000423636 FLT3P36888 993 aa12.95□□□□□ -0.34
PTPRN-204ENST00000423636 GABPB1Q06547 395 aaPredicted RBP12.95□□□□□ -0.34
PTPRN-204ENST00000423636 SEMA3FQ13275 785 aa12.95□□□□□ -0.34
PTPRN-204ENST00000423636 H2AFVQ71UI9 128 aa12.95□□□□□ -0.34
PTPRN-204ENST00000423636 TRIM51Q9BSJ1 452 aa12.95□□□□□ -0.34
PTPRN-204ENST00000423636 RNF19AQ9NV58 838 aa12.95□□□□□ -0.34
PTPRN-204ENST00000423636 AIPL1Q9NZN9 384 aa12.95□□□□□ -0.34
PTPRN-204ENST00000423636 ZKSCAN7Q9P0L1 754 aaPredicted RBP12.95□□□□□ -0.34
PTPRN-204ENST00000423636 SSU72P8A0A1W2PR75 194 aa12.95□□□□□ -0.34
PTPRN-204ENST00000423636 HSD17B4P51659 736 aa12.95□□□□□ -0.34
PTPRN-204ENST00000423636 VAMP7P51809 220 aa12.95□□□□□ -0.34
PTPRN-204ENST00000423636 DRP2Q13474 957 aa12.95□□□□□ -0.34
PTPRN-204ENST00000423636 CFAP221Q4G0U5 840 aa12.95□□□□□ -0.34
PTPRN-204ENST00000423636 ZNF394Q53GI3 561 aa12.95□□□□□ -0.34
PTPRN-204ENST00000423636 GLG1Q92896 1179 aa12.95□□□□□ -0.34
PTPRN-204ENST00000423636 CLMNQ96JQ2 1002 aa12.95□□□□□ -0.34
PTPRN-204ENST00000423636 FAM107BQ9H098 131 aa12.95□□□□□ -0.34
PTPRN-204ENST00000423636 COG5Q9UP83 839 aa12.95□□□□□ -0.34
PTPRN-204ENST00000423636 FRMPD4Q14CM0 1322 aa12.94□□□□□ -0.34
PTPRN-204ENST00000423636 TTLL13PA6NNM8 815 aa12.94□□□□□ -0.34
PTPRN-204ENST00000423636 HNRNPDLO14979 420 aaKnown RBP12.94□□□□□ -0.34
PTPRN-204ENST00000423636 NPTX2P47972 431 aa12.94□□□□□ -0.34
PTPRN-204ENST00000423636 BACE1P56817 501 aa12.94□□□□□ -0.34
PTPRN-204ENST00000423636 CDK17Q00537 523 aa12.94□□□□□ -0.34
PTPRN-204ENST00000423636 GJC2Q5T442 439 aaPredicted RBP12.94□□□□□ -0.34
PTPRN-204ENST00000423636 GADL1Q6ZQY3 521 aa12.94□□□□□ -0.34
PTPRN-204ENST00000423636 FAM83AQ86UY5 434 aa12.94□□□□□ -0.34
PTPRN-204ENST00000423636 RPUSD2Q8IZ73 545 aaKnown RBP12.94□□□□□ -0.34
PTPRN-204ENST00000423636 ANKRD35Q8N283 1001 aa12.94□□□□□ -0.34
PTPRN-204ENST00000423636 BORCS6Q96GS4 357 aa12.94□□□□□ -0.34
PTPRN-204ENST00000423636 EHMT1Q9H9B1 1298 aa12.94□□□□□ -0.34
PTPRN-204ENST00000423636 OLFML3Q9NRN5 406 aa12.94□□□□□ -0.34
PTPRN-204ENST00000423636 WDR46O15213 610 aaKnown RBP12.94□□□□□ -0.34
PTPRN-204ENST00000423636 NPM3O75607 178 aaKnown RBP12.94□□□□□ -0.34
PTPRN-204ENST00000423636 SOX5P35711 763 aa12.94□□□□□ -0.34
PTPRN-204ENST00000423636 NCAPG2Q86XI2 1143 aa12.94□□□□□ -0.34
PTPRN-204ENST00000423636 ZNF280CQ8ND82 737 aa12.94□□□□□ -0.34
PTPRN-204ENST00000423636 TAS1R2Q8TE23 839 aa12.94□□□□□ -0.34
PTPRN-204ENST00000423636 KRT35Q92764 455 aa12.94□□□□□ -0.34
PTPRN-204ENST00000423636 GPR88Q9GZN0 384 aa12.94□□□□□ -0.34
PTPRN-204ENST00000423636 ZNF408Q9H9D4 720 aa12.94□□□□□ -0.34
PTPRN-204ENST00000423636 A1CFQ9NQ94 594 aaKnown RBP12.94□□□□□ -0.34
PTPRN-204ENST00000423636 DNAJC17Q9NVM6 304 aaKnown RBP12.94□□□□□ -0.34
PTPRN-204ENST00000423636 CTTNBP2NLQ9P2B4 639 aa12.94□□□□□ -0.34
PTPRN-204ENST00000423636 LRRIQ4A6NIV6 560 aa12.93□□□□□ -0.34
PTPRN-204ENST00000423636 AGPSO00116 658 aa12.93□□□□□ -0.34
PTPRN-204ENST00000423636 FTLP02792 175 aaPredicted RBP12.93□□□□□ -0.34
PTPRN-204ENST00000423636 MMEP08473 750 aa12.93□□□□□ -0.34
PTPRN-204ENST00000423636 ZBTB33Q86T24 672 aa12.93□□□□□ -0.34
PTPRN-204ENST00000423636 CASKIN2Q8WXE0 1202 aa12.93□□□□□ -0.34
PTPRN-204ENST00000423636 OTUD5Q96G74 571 aa12.93□□□□□ -0.34
PTPRN-204ENST00000423636 KMT5AQ9NQR1 393 aa12.93□□□□□ -0.34
PTPRN-204ENST00000423636 PTPN22Q9Y2R2 807 aa12.93□□□□□ -0.34
PTPRN-204ENST00000423636 POLR2AP24928 1970 aaKnown RBP12.93□□□□□ -0.34
PTPRN-204ENST00000423636 FGGP02679 453 aa12.93□□□□□ -0.34
PTPRN-204ENST00000423636 GAP43P17677 238 aa12.93□□□□□ -0.34
PTPRN-204ENST00000423636 TCP1P17987 556 aaKnown RBP12.93□□□□□ -0.34
PTPRN-204ENST00000423636 CNGA1P29973 690 aa12.93□□□□□ -0.34
PTPRN-204ENST00000423636 DHX9Q08211 1270 aaKnown RBP12.93□□□□□ -0.34
PTPRN-204ENST00000423636 UBAP2Q5T6F2 1119 aaKnown RBP12.93□□□□□ -0.34
PTPRN-204ENST00000423636 MEI1Q5TIA1 1274 aa12.93□□□□□ -0.34
PTPRN-204ENST00000423636 PPP4R3CPQ6ZMV5 832 aa12.93□□□□□ -0.34
PTPRN-204ENST00000423636 TPCN2Q8NHX9 752 aa12.93□□□□□ -0.34
PTPRN-204ENST00000423636 TRAPPC12Q8WVT3 735 aa12.93□□□□□ -0.34
PTPRN-204ENST00000423636 STIM2Q9P246 746 aa12.93□□□□□ -0.34
PTPRN-204ENST00000423636 ANO9A1A5B4 782 aa12.93□□□□□ -0.34
PTPRN-204ENST00000423636 GOLGA6BA6NDN3 693 aa12.93□□□□□ -0.34
PTPRN-204ENST00000423636 KRIT1O00522 736 aa12.93□□□□□ -0.34
PTPRN-204ENST00000423636 TTI1O43156 1089 aa12.93□□□□□ -0.34
PTPRN-204ENST00000423636 EIF3JO75822 258 aaKnown RBP12.93□□□□□ -0.34
PTPRN-204ENST00000423636 CFHP08603 1231 aa12.93□□□□□ -0.34
PTPRN-204ENST00000423636 CHADLQ6NUI6 762 aa12.93□□□□□ -0.34
PTPRN-204ENST00000423636 PCDHB18PQ96TA0 734 aa12.93□□□□□ -0.34
PTPRN-204ENST00000423636 TMEM117Q9H0C3 514 aa12.93□□□□□ -0.34
PTPRN-204ENST00000423636 NEUROG2Q9H2A3 272 aa12.93□□□□□ -0.34
PTPRN-204ENST00000423636 APEX2Q9UBZ4 518 aa12.93□□□□□ -0.34
PTPRN-204ENST00000423636 KIF4AO95239 1232 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 6.3 ms