RNA–Protein interactions for RNA: ENST00000423635.5

CHCHD3-202, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 1 (best)

Gene CHCHD3, Length 1,310 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-202ENST00000423635 DRP2Q13474 957 aa18.87■□□□□ 0.61
CHCHD3-202ENST00000423635 DGLUCYQ7Z3D6 616 aa18.87■□□□□ 0.61
CHCHD3-202ENST00000423635 ZNF280BQ86YH2 543 aa18.87■□□□□ 0.61
CHCHD3-202ENST00000423635 NXPE3Q969Y0 559 aa18.87■□□□□ 0.61
CHCHD3-202ENST00000423635 CEP89Q96ST8 783 aa18.87■□□□□ 0.61
CHCHD3-202ENST00000423635 NIFKQ9BYG3 293 aaKnown RBP18.87■□□□□ 0.61
CHCHD3-202ENST00000423635 INO80BQ9C086 356 aaPredicted RBP18.87■□□□□ 0.61
CHCHD3-202ENST00000423635 FAM105AQ9NUU6 356 aa18.87■□□□□ 0.61
CHCHD3-202ENST00000423635 WDR81Q562E7 1941 aa18.87■□□□□ 0.61
CHCHD3-202ENST00000423635 A0A087WZ62 844 aa18.86■□□□□ 0.61
CHCHD3-202ENST00000423635 IGKV6-21A0A0C4DH24 114 aa18.86■□□□□ 0.61
CHCHD3-202ENST00000423635 MEIS3P2A8K0S8 358 aa18.86■□□□□ 0.61
CHCHD3-202ENST00000423635 SFPQP23246 707 aaKnown RBP eCLIP18.86■□□□□ 0.61
CHCHD3-202ENST00000423635 CDC27P30260 824 aa18.86■□□□□ 0.61
CHCHD3-202ENST00000423635 RAB27AP51159 221 aa18.86■□□□□ 0.61
CHCHD3-202ENST00000423635 RNASELQ05823 741 aaKnown RBP18.86■□□□□ 0.61
CHCHD3-202ENST00000423635 NONOQ15233 471 aaKnown RBP eCLIP18.86■□□□□ 0.612e-6■■□□□ 12.7
CHCHD3-202ENST00000423635 TWF2Q6IBS0 349 aaKnown RBP18.86■□□□□ 0.61
CHCHD3-202ENST00000423635 SLC44A3Q8N4M1 653 aa18.86■□□□□ 0.61
CHCHD3-202ENST00000423635 FDXACB1Q9BRP7 624 aaPredicted RBP18.86■□□□□ 0.61
CHCHD3-202ENST00000423635 WDR6Q9NNW5 1121 aaKnown RBP18.86■□□□□ 0.61
CHCHD3-202ENST00000423635 EPS15L1Q9UBC2 864 aa18.86■□□□□ 0.61
CHCHD3-202ENST00000423635 FRYLO94915 3013 aa18.86■□□□□ 0.61
CHCHD3-202ENST00000423635 SPDYE4A6NLX3 237 aa18.85■□□□□ 0.61
CHCHD3-202ENST00000423635 STK25O00506 426 aa18.85■□□□□ 0.61
CHCHD3-202ENST00000423635 B4GALT3O60512 393 aa18.85■□□□□ 0.61
CHCHD3-202ENST00000423635 PAPLNO95428 1278 aa18.85■□□□□ 0.61
CHCHD3-202ENST00000423635 ALDH2P05091 517 aa18.85■□□□□ 0.61
CHCHD3-202ENST00000423635 CFHP08603 1231 aa18.85■□□□□ 0.61
CHCHD3-202ENST00000423635 SFNP31947 248 aa18.85■□□□□ 0.61
CHCHD3-202ENST00000423635 RCAN1P53805 252 aa18.85■□□□□ 0.61
CHCHD3-202ENST00000423635 PUM1Q14671 1186 aaKnown RBP eCLIP18.85■□□□□ 0.612e-8■□□□□ 8.6
CHCHD3-202ENST00000423635 UGCGQ16739 394 aa18.85■□□□□ 0.61
CHCHD3-202ENST00000423635 LONRF3Q496Y0 759 aa18.85■□□□□ 0.61
CHCHD3-202ENST00000423635 ZNF410Q86VK4 478 aa18.85■□□□□ 0.61
CHCHD3-202ENST00000423635 KIAA2013Q8IYS2 634 aa18.85■□□□□ 0.61
CHCHD3-202ENST00000423635 REXO1Q8N1G1 1221 aaKnown RBP18.85■□□□□ 0.61
CHCHD3-202ENST00000423635 RSAD2Q8WXG1 361 aa18.85■□□□□ 0.61
CHCHD3-202ENST00000423635 PGBD4Q96DM1 585 aa18.85■□□□□ 0.61
CHCHD3-202ENST00000423635 RIT2Q99578 217 aa18.85■□□□□ 0.61
CHCHD3-202ENST00000423635 TMEM175Q9BSA9 504 aa18.85■□□□□ 0.61
CHCHD3-202ENST00000423635 C6orf50Q9HD87 102 aa18.85■□□□□ 0.61
CHCHD3-202ENST00000423635 MRPL17Q9NRX2 175 aaKnown RBP18.85■□□□□ 0.61
CHCHD3-202ENST00000423635 INPP5FQ9Y2H2 1132 aa18.85■□□□□ 0.61
CHCHD3-202ENST00000423635 C2orf16Q68DN1 1984 aa18.85■□□□□ 0.61
CHCHD3-202ENST00000423635 MSH4O15457 936 aa18.84■□□□□ 0.61
CHCHD3-202ENST00000423635 EDIL3O43854 480 aa18.84■□□□□ 0.61
CHCHD3-202ENST00000423635 DDHD2O94830 711 aa18.84■□□□□ 0.61
CHCHD3-202ENST00000423635 STBD1O95210 358 aa18.84■□□□□ 0.61
CHCHD3-202ENST00000423635 JAK3P52333 1124 aa18.84■□□□□ 0.61
CHCHD3-202ENST00000423635 PHLDB3Q6NSJ2 640 aa18.84■□□□□ 0.61
CHCHD3-202ENST00000423635 DHX32Q7L7V1 743 aaKnown RBP18.84■□□□□ 0.61
CHCHD3-202ENST00000423635 STAMQ92783 540 aa18.84■□□□□ 0.61
CHCHD3-202ENST00000423635 GBP3Q9H0R5 595 aa18.84■□□□□ 0.61
CHCHD3-202ENST00000423635 DLGAP2Q9P1A6 1054 aa18.84■□□□□ 0.61
CHCHD3-202ENST00000423635 PIN4Q9Y237 131 aaKnown RBP18.84■□□□□ 0.61
CHCHD3-202ENST00000423635 R4GN57 208 aa18.84■□□□□ 0.61
CHCHD3-202ENST00000423635 CCDC195A0A1B0GUA6 201 aa18.83■□□□□ 0.61
CHCHD3-202ENST00000423635 GOLGA8AA7E2F4 631 aa18.83■□□□□ 0.61
CHCHD3-202ENST00000423635 GOLGA8BA8MQT2 603 aa18.83■□□□□ 0.61
CHCHD3-202ENST00000423635 SRFP11831 508 aa18.83■□□□□ 0.61
CHCHD3-202ENST00000423635 GNA11P29992 359 aa18.83■□□□□ 0.61
CHCHD3-202ENST00000423635 DNM2P50570 870 aa18.83■□□□□ 0.61
CHCHD3-202ENST00000423635 AGMOQ6ZNB7 445 aa18.83■□□□□ 0.61
CHCHD3-202ENST00000423635 MRPL10Q7Z7H8 261 aaKnown RBP18.83■□□□□ 0.61
CHCHD3-202ENST00000423635 CCDC12Q8WUD4 166 aaPredicted RBP18.83■□□□□ 0.61
CHCHD3-202ENST00000423635 ESYT1Q9BSJ8 1104 aa18.83■□□□□ 0.61
CHCHD3-202ENST00000423635 TBC1D17Q9HA65 648 aa18.83■□□□□ 0.61
CHCHD3-202ENST00000423635 DLL3Q9NYJ7 618 aa18.83■□□□□ 0.61
CHCHD3-202ENST00000423635 KANSL3Q9P2N6 904 aa18.83■□□□□ 0.61
CHCHD3-202ENST00000423635 DPP7Q9UHL4 492 aa18.83■□□□□ 0.61
CHCHD3-202ENST00000423635 SSX2IPQ9Y2D8 614 aa18.83■□□□□ 0.61
CHCHD3-202ENST00000423635 FAN1Q9Y2M0 1017 aa18.83■□□□□ 0.61
CHCHD3-202ENST00000423635 SOD2P04179 222 aa18.82■□□□□ 0.6
CHCHD3-202ENST00000423635 SSBP05455 408 aaKnown RBP eCLIP18.82■□□□□ 0.6
CHCHD3-202ENST00000423635 GBP2P32456 591 aaPredicted RBP18.82■□□□□ 0.6
CHCHD3-202ENST00000423635 ADD1P35611 737 aaKnown RBP18.82■□□□□ 0.6
CHCHD3-202ENST00000423635 XKR3Q5GH77 459 aa18.82■□□□□ 0.6
CHCHD3-202ENST00000423635 ZC3H14Q6PJT7 736 aaKnown RBP18.82■□□□□ 0.6
CHCHD3-202ENST00000423635 RDM1Q8NG50 284 aa18.82■□□□□ 0.6
CHCHD3-202ENST00000423635 URGCPQ8TCY9 931 aa18.82■□□□□ 0.6
CHCHD3-202ENST00000423635 SLC5A5Q92911 643 aa18.82■□□□□ 0.6
CHCHD3-202ENST00000423635 RPS6KC1Q96S38 1066 aa18.82■□□□□ 0.6
CHCHD3-202ENST00000423635 UNC45AQ9H3U1 944 aa18.82■□□□□ 0.6
CHCHD3-202ENST00000423635 MAN1C1Q9NR34 630 aa18.82■□□□□ 0.6
CHCHD3-202ENST00000423635 SUCLA2Q9P2R7 463 aaPredicted RBP18.82■□□□□ 0.6
CHCHD3-202ENST00000423635 PCDHB2Q9Y5E7 798 aa18.82■□□□□ 0.6
CHCHD3-202ENST00000423635 NRP1O14786 923 aa18.81■□□□□ 0.6
CHCHD3-202ENST00000423635 GAS7O60861 476 aa18.81■□□□□ 0.6
CHCHD3-202ENST00000423635 MAFO75444 373 aaPredicted RBP18.81■□□□□ 0.6
CHCHD3-202ENST00000423635 EFEMP2O95967 443 aa18.81■□□□□ 0.6
CHCHD3-202ENST00000423635 C1RP00736 705 aa18.81■□□□□ 0.6
CHCHD3-202ENST00000423635 SP9P0CG40 484 aa18.81■□□□□ 0.6
CHCHD3-202ENST00000423635 USP11P51784 963 aa18.81■□□□□ 0.6
CHCHD3-202ENST00000423635 AFF1P51825 1210 aaKnown RBP18.81■□□□□ 0.6
CHCHD3-202ENST00000423635 TSGA10IPQ3SY00 556 aa18.81■□□□□ 0.6
CHCHD3-202ENST00000423635 OTOGLQ3ZCN5 2332 aa18.81■□□□□ 0.6
CHCHD3-202ENST00000423635 MTERF2Q49AM1 385 aa18.81■□□□□ 0.6
CHCHD3-202ENST00000423635 CATSPER4Q7RTX7 472 aa18.81■□□□□ 0.6
CHCHD3-202ENST00000423635 C1orf210Q8IVY1 113 aa18.81■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms