RNA–Protein interactions for RNA: ENST00000422468.1

TRIM43CP-201, Transcript of tripartite motif containing 43C, pseudogene, humanhuman

BASIC

Gene TRIM43CP, Length 1,028 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM43CP-201ENST00000422468 ECHDC2Q86YB7 292 aa9.17□□□□□ -0.94
TRIM43CP-201ENST00000422468 SLFN12Q8IYM2 578 aa9.17□□□□□ -0.94
TRIM43CP-201ENST00000422468 C4orf32Q8N8J7 132 aa9.17□□□□□ -0.94
TRIM43CP-201ENST00000422468 COLGALT1Q8NBJ5 622 aa9.17□□□□□ -0.94
TRIM43CP-201ENST00000422468 POF1BQ8WVV4 589 aa9.17□□□□□ -0.94
TRIM43CP-201ENST00000422468 ZNF668Q96K58 619 aaPredicted RBP9.17□□□□□ -0.94
TRIM43CP-201ENST00000422468 GBP4Q96PP9 640 aa9.17□□□□□ -0.94
TRIM43CP-201ENST00000422468 EPAS1Q99814 870 aa9.17□□□□□ -0.94
TRIM43CP-201ENST00000422468 JPH2Q9BR39 696 aaPredicted RBP9.17□□□□□ -0.94
TRIM43CP-201ENST00000422468 SH2D3AQ9BRG2 576 aa9.17□□□□□ -0.94
TRIM43CP-201ENST00000422468 C1QTNF1Q9BXJ1 281 aa9.17□□□□□ -0.94
TRIM43CP-201ENST00000422468 GCOM2Q9BZD3 368 aaPredicted RBP9.17□□□□□ -0.94
TRIM43CP-201ENST00000422468 TMEM117Q9H0C3 514 aa9.17□□□□□ -0.94
TRIM43CP-201ENST00000422468 BRMS1Q9HCU9 246 aa9.17□□□□□ -0.94
TRIM43CP-201ENST00000422468 CYP26B1Q9NR63 512 aa9.17□□□□□ -0.94
TRIM43CP-201ENST00000422468 TYW1Q9NV66 732 aaKnown RBP9.17□□□□□ -0.94
TRIM43CP-201ENST00000422468 DACT1Q9NYF0 836 aa9.17□□□□□ -0.94
TRIM43CP-201ENST00000422468 SUCLA2Q9P2R7 463 aaPredicted RBP9.17□□□□□ -0.94
TRIM43CP-201ENST00000422468 PPME1Q9Y570 386 aa9.17□□□□□ -0.94
TRIM43CP-201ENST00000422468 A0A087WZ62 844 aa9.16□□□□□ -0.94
TRIM43CP-201ENST00000422468 A0A0U1RQF3 1178 aa9.16□□□□□ -0.94
TRIM43CP-201ENST00000422468 ZBTB39O15060 712 aa9.16□□□□□ -0.94
TRIM43CP-201ENST00000422468 TRAK2O60296 914 aa9.16□□□□□ -0.94
TRIM43CP-201ENST00000422468 CSDE1O75534 798 aaKnown RBP9.16□□□□□ -0.94
TRIM43CP-201ENST00000422468 FGF18O76093 207 aa9.16□□□□□ -0.94
TRIM43CP-201ENST00000422468 CSPG5O95196 566 aa9.16□□□□□ -0.94
TRIM43CP-201ENST00000422468 BAG4O95429 457 aaKnown RBP9.16□□□□□ -0.94
TRIM43CP-201ENST00000422468 EOMESO95936 686 aa9.16□□□□□ -0.94
TRIM43CP-201ENST00000422468 P4HBP07237 508 aaKnown RBP9.16□□□□□ -0.94
TRIM43CP-201ENST00000422468 IL9P15248 144 aa9.16□□□□□ -0.94
TRIM43CP-201ENST00000422468 LAG3P18627 525 aa9.16□□□□□ -0.94
TRIM43CP-201ENST00000422468 FGFR4P22455 802 aa9.16□□□□□ -0.94
TRIM43CP-201ENST00000422468 SFPQP23246 707 aaKnown RBP eCLIP9.16□□□□□ -0.94
TRIM43CP-201ENST00000422468 GTF2F1P35269 517 aaKnown RBP eCLIP9.16□□□□□ -0.94
TRIM43CP-201ENST00000422468 IRS1P35568 1242 aa9.16□□□□□ -0.94
TRIM43CP-201ENST00000422468 ADAM15Q13444 863 aa9.16□□□□□ -0.94
TRIM43CP-201ENST00000422468 CUL4AQ13619 759 aa9.16□□□□□ -0.94
TRIM43CP-201ENST00000422468 TRIM29Q14134 588 aa9.16□□□□□ -0.94
TRIM43CP-201ENST00000422468 EPHA7Q15375 998 aa9.16□□□□□ -0.94
TRIM43CP-201ENST00000422468 IL17AQ16552 155 aa9.16□□□□□ -0.94
TRIM43CP-201ENST00000422468 PLA2G4FQ68DD2 849 aa9.16□□□□□ -0.94
TRIM43CP-201ENST00000422468 PDE12Q6L8Q7 609 aaKnown RBP9.16□□□□□ -0.94
TRIM43CP-201ENST00000422468 ZNF410Q86VK4 478 aa9.16□□□□□ -0.94
TRIM43CP-201ENST00000422468 RHPN2Q8IUC4 686 aa9.16□□□□□ -0.94
TRIM43CP-201ENST00000422468 DIS3L2Q8IYB7 885 aaKnown RBP9.16□□□□□ -0.94
TRIM43CP-201ENST00000422468 EXOC8Q8IYI6 725 aa9.16□□□□□ -0.94
TRIM43CP-201ENST00000422468 ABI1Q8IZP0 508 aa9.16□□□□□ -0.94
TRIM43CP-201ENST00000422468 GJD3Q8N144 294 aa9.16□□□□□ -0.94
TRIM43CP-201ENST00000422468 LRRC15Q8TF66 581 aa9.16□□□□□ -0.94
TRIM43CP-201ENST00000422468 SLC7A3Q8WY07 619 aa9.16□□□□□ -0.94
TRIM43CP-201ENST00000422468 KHSRPQ92945 711 aaKnown RBP eCLIP9.16□□□□□ -0.94
TRIM43CP-201ENST00000422468 CASD1Q96PB1 797 aa9.16□□□□□ -0.94
TRIM43CP-201ENST00000422468 FDXACB1Q9BRP7 624 aaPredicted RBP9.16□□□□□ -0.94
TRIM43CP-201ENST00000422468 TRAIPQ9BWF2 469 aa9.16□□□□□ -0.94
TRIM43CP-201ENST00000422468 INO80BQ9C086 356 aaPredicted RBP9.16□□□□□ -0.94
TRIM43CP-201ENST00000422468 IGFLR1Q9H665 355 aa9.16□□□□□ -0.94
TRIM43CP-201ENST00000422468 CWH43Q9H720 699 aa9.16□□□□□ -0.94
TRIM43CP-201ENST00000422468 CD320Q9NPF0 282 aa9.16□□□□□ -0.94
TRIM43CP-201ENST00000422468 CHST12Q9NRB3 414 aa9.16□□□□□ -0.94
TRIM43CP-201ENST00000422468 RNF19AQ9NV58 838 aa9.16□□□□□ -0.94
TRIM43CP-201ENST00000422468 PRKAG3Q9UGI9 489 aa9.16□□□□□ -0.94
TRIM43CP-201ENST00000422468 MYH15Q9Y2K3 1946 aa9.15□□□□□ -0.94
TRIM43CP-201ENST00000422468 A0A087WWV3 80 aa9.15□□□□□ -0.94
TRIM43CP-201ENST00000422468 SNPHO15079 494 aa9.15□□□□□ -0.94
TRIM43CP-201ENST00000422468 LINC01565O15544 149 aa9.15□□□□□ -0.94
TRIM43CP-201ENST00000422468 TBX10O75333 385 aa9.15□□□□□ -0.94
TRIM43CP-201ENST00000422468 RFC5P40937 340 aa9.15□□□□□ -0.94
TRIM43CP-201ENST00000422468 NRIP1P48552 1158 aa9.15□□□□□ -0.94
TRIM43CP-201ENST00000422468 POLGP54098 1239 aaPredicted RBP9.15□□□□□ -0.94
TRIM43CP-201ENST00000422468 NPEPPSP55786 919 aa9.15□□□□□ -0.94
TRIM43CP-201ENST00000422468 DLX2Q07687 328 aaPredicted RBP9.15□□□□□ -0.94
TRIM43CP-201ENST00000422468 CLLU1OSQ5K130 101 aa9.15□□□□□ -0.94
TRIM43CP-201ENST00000422468 NCAPH2Q6IBW4 605 aa9.15□□□□□ -0.94
TRIM43CP-201ENST00000422468 LRRC55Q6ZSA7 311 aa9.15□□□□□ -0.94
TRIM43CP-201ENST00000422468 OTUD6AQ7L8S5 288 aa9.15□□□□□ -0.94
TRIM43CP-201ENST00000422468 ADGRD2Q7Z7M1 963 aa9.15□□□□□ -0.94
TRIM43CP-201ENST00000422468 ZNF598Q86UK7 904 aaKnown RBP9.15□□□□□ -0.94
TRIM43CP-201ENST00000422468 KSR1Q8IVT5 923 aa9.15□□□□□ -0.94
TRIM43CP-201ENST00000422468 C4orf19Q8IY42 314 aa9.15□□□□□ -0.94
TRIM43CP-201ENST00000422468 THNSL1Q8IYQ7 743 aa9.15□□□□□ -0.94
TRIM43CP-201ENST00000422468 LRRC43Q8N309 656 aa9.15□□□□□ -0.94
TRIM43CP-201ENST00000422468 EFHBQ8N7U6 833 aa9.15□□□□□ -0.94
TRIM43CP-201ENST00000422468 RNF169Q8NCN4 708 aa9.15□□□□□ -0.94
TRIM43CP-201ENST00000422468 FBXO18Q8NFZ0 1043 aa9.15□□□□□ -0.94
TRIM43CP-201ENST00000422468 CEP170P1Q96L14 293 aa9.15□□□□□ -0.94
TRIM43CP-201ENST00000422468 MTMR9Q96QG7 549 aa9.15□□□□□ -0.94
TRIM43CP-201ENST00000422468 LXNQ9BS40 222 aa9.15□□□□□ -0.94
TRIM43CP-201ENST00000422468 EPHX3Q9H6B9 360 aa9.15□□□□□ -0.94
TRIM43CP-201ENST00000422468 DHX33Q9H6R0 707 aaKnown RBP9.15□□□□□ -0.94
TRIM43CP-201ENST00000422468 ZSWIM4Q9H7M6 989 aa9.15□□□□□ -0.94
TRIM43CP-201ENST00000422468 TLR9Q9NR96 1032 aa9.15□□□□□ -0.94
TRIM43CP-201ENST00000422468 HCSTQ9UBK5 93 aa9.15□□□□□ -0.94
TRIM43CP-201ENST00000422468 LZTS1Q9Y250 596 aa9.15□□□□□ -0.94
TRIM43CP-201ENST00000422468 PI4K2BG5E9Z4 385 aa9.14□□□□□ -0.95
TRIM43CP-201ENST00000422468 GAS2O43903 313 aaKnown RBP9.14□□□□□ -0.95
TRIM43CP-201ENST00000422468 NEMFO60524 1076 aa9.14□□□□□ -0.95
TRIM43CP-201ENST00000422468 SLITRK3O94933 977 aa9.14□□□□□ -0.95
TRIM43CP-201ENST00000422468 SKIP12755 728 aa9.14□□□□□ -0.95
TRIM43CP-201ENST00000422468 ATF7P17544 494 aaPredicted RBP9.14□□□□□ -0.95
TRIM43CP-201ENST00000422468 COL9A1P20849 921 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms