RNA–Protein interactions for RNA: ENST00000422392.6

CDH1-202, Transcript of cadherin 1, humanhuman

TSL 1 (best) BASIC

Gene CDH1, Length 2,567 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-202ENST00000422392 DR1Q01658 176 aa17.1■□□□□ 0.33
CDH1-202ENST00000422392 AOC3Q16853 763 aa17.1■□□□□ 0.33
CDH1-202ENST00000422392 KAT5Q92993 513 aa17.1■□□□□ 0.33
CDH1-202ENST00000422392 CYFIP2Q96F07 1278 aa17.1■□□□□ 0.33
CDH1-202ENST00000422392 ZNF646O15015 1829 aaPredicted RBP17.1■□□□□ 0.33
CDH1-202ENST00000422392 EMSYQ7Z589 1322 aa17.1■□□□□ 0.33
CDH1-202ENST00000422392 K7ENM7 598 aa17.09■□□□□ 0.33
CDH1-202ENST00000422392 KRT13P13646 458 aa17.09■□□□□ 0.33
CDH1-202ENST00000422392 USP8P40818 1118 aa17.09■□□□□ 0.33
CDH1-202ENST00000422392 PPP2R2AP63151 447 aa17.09■□□□□ 0.33
CDH1-202ENST00000422392 RUFY4Q6ZNE9 571 aa17.09■□□□□ 0.33
CDH1-202ENST00000422392 LMO3Q8TAP4 145 aa17.09■□□□□ 0.33
CDH1-202ENST00000422392 MDM1Q8TC05 714 aa17.09■□□□□ 0.33
CDH1-202ENST00000422392 C18orf8Q96DM3 657 aa17.09■□□□□ 0.33
CDH1-202ENST00000422392 NACC1Q96RE7 527 aa17.09■□□□□ 0.33
CDH1-202ENST00000422392 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.09■□□□□ 0.33
CDH1-202ENST00000422392 FAM114A2Q9NRY5 505 aa17.09■□□□□ 0.33
CDH1-202ENST00000422392 FBXO28Q9NVF7 368 aa17.09■□□□□ 0.33
CDH1-202ENST00000422392 SNX24Q9Y343 169 aa17.09■□□□□ 0.33
CDH1-202ENST00000422392 ATP8B3O60423 1300 aa17.09■□□□□ 0.33
CDH1-202ENST00000422392 CLRN2A0PK11 232 aa17.09■□□□□ 0.33
CDH1-202ENST00000422392 GUCY2CP25092 1073 aa17.09■□□□□ 0.33
CDH1-202ENST00000422392 GCLMP48507 274 aa17.09■□□□□ 0.33
CDH1-202ENST00000422392 PLTPP55058 493 aa17.09■□□□□ 0.33
CDH1-202ENST00000422392 IFFO1Q0D2I5 559 aa17.09■□□□□ 0.33
CDH1-202ENST00000422392 MAPK7Q13164 816 aa17.09■□□□□ 0.33
CDH1-202ENST00000422392 MTMR3Q13615 1198 aa17.09■□□□□ 0.33
CDH1-202ENST00000422392 NFIL3Q16649 462 aa17.09■□□□□ 0.33
CDH1-202ENST00000422392 CPNE8Q86YQ8 564 aa17.09■□□□□ 0.33
CDH1-202ENST00000422392 ALG6Q9Y672 507 aa17.09■□□□□ 0.33
CDH1-202ENST00000422392 ARHGEF35A5YM69 484 aa17.08■□□□□ 0.33
CDH1-202ENST00000422392 H0YHG0 523 aa17.08■□□□□ 0.33
CDH1-202ENST00000422392 HNRNPH1P31943 449 aaKnown RBP17.08■□□□□ 0.33
CDH1-202ENST00000422392 PDE6BP35913 854 aa17.08■□□□□ 0.33
CDH1-202ENST00000422392 PPP3CAQ08209 521 aa17.08■□□□□ 0.33
CDH1-202ENST00000422392 LLGL1Q15334 1064 aa17.08■□□□□ 0.33
CDH1-202ENST00000422392 ARFGAP2Q8N6H7 521 aa17.08■□□□□ 0.33
CDH1-202ENST00000422392 ELMO3Q96BJ8 720 aa17.08■□□□□ 0.33
CDH1-202ENST00000422392 AGPAT1Q99943 283 aa17.08■□□□□ 0.33
CDH1-202ENST00000422392 CBWD1Q9BRT8 395 aa17.08■□□□□ 0.33
CDH1-202ENST00000422392 CTTNBP2NLQ9P2B4 639 aa17.08■□□□□ 0.33
CDH1-202ENST00000422392 SERPINA10Q9UK55 444 aa17.08■□□□□ 0.33
CDH1-202ENST00000422392 TTC7AQ9ULT0 858 aaPredicted RBP17.08■□□□□ 0.33
CDH1-202ENST00000422392 TMEM150BA6NC51 233 aa17.08■□□□□ 0.32
CDH1-202ENST00000422392 ANKRD62A6NC57 917 aa17.08■□□□□ 0.32
CDH1-202ENST00000422392 SMIM23A6NLE4 172 aa17.08■□□□□ 0.32
CDH1-202ENST00000422392 IPO5O00410 1097 aaKnown RBP17.08■□□□□ 0.32
CDH1-202ENST00000422392 CAND2O75155 1236 aa17.08■□□□□ 0.32
CDH1-202ENST00000422392 FTLP02792 175 aaPredicted RBP17.08■□□□□ 0.32
CDH1-202ENST00000422392 FNTAP49354 379 aa17.08■□□□□ 0.32
CDH1-202ENST00000422392 SF3A3Q12874 501 aaKnown RBP eCLIP17.08■□□□□ 0.32
CDH1-202ENST00000422392 MKRN4PQ13434 485 aaPredicted RBP17.08■□□□□ 0.32
CDH1-202ENST00000422392 BIRC3Q13489 604 aa17.08■□□□□ 0.32
CDH1-202ENST00000422392 MMS22LQ6ZRQ5 1243 aa17.08■□□□□ 0.32
CDH1-202ENST00000422392 CARD9Q9H257 536 aa17.08■□□□□ 0.32
CDH1-202ENST00000422392 ZBTB21Q9ULJ3 1066 aa17.08■□□□□ 0.32
CDH1-202ENST00000422392 DAAM1Q9Y4D1 1078 aa17.08■□□□□ 0.32
CDH1-202ENST00000422392 ZNFX1Q9P2E3 1918 aaKnown RBP17.07■□□□□ 0.32
CDH1-202ENST00000422392 GMNCA6NCL1 334 aa17.07■□□□□ 0.32
CDH1-202ENST00000422392 ONECUT3O60422 494 aaPredicted RBP17.07■□□□□ 0.32
CDH1-202ENST00000422392 PPP2R5AQ15172 486 aa17.07■□□□□ 0.32
CDH1-202ENST00000422392 SPRED3Q2MJR0 410 aa17.07■□□□□ 0.32
CDH1-202ENST00000422392 CDAN1Q8IWY9 1227 aa17.07■□□□□ 0.32
CDH1-202ENST00000422392 ZDHHC14Q8IZN3 488 aa17.07■□□□□ 0.32
CDH1-202ENST00000422392 NLGN1Q8N2Q7 840 aa17.07■□□□□ 0.32
CDH1-202ENST00000422392 UHMK1Q8TAS1 419 aaKnown RBP17.07■□□□□ 0.32
CDH1-202ENST00000422392 FBXO25Q8TCJ0 367 aa17.07■□□□□ 0.32
CDH1-202ENST00000422392 RAPGEF5Q92565 580 aa17.07■□□□□ 0.32
CDH1-202ENST00000422392 BTBD6Q96KE9 485 aa17.07■□□□□ 0.32
CDH1-202ENST00000422392 ERP44Q9BS26 406 aa17.07■□□□□ 0.32
CDH1-202ENST00000422392 MRIQ9BWK5 157 aa17.07■□□□□ 0.32
CDH1-202ENST00000422392 EPB41L4BQ9H329 900 aa17.07■□□□□ 0.32
CDH1-202ENST00000422392 TRAPPC3O43617 180 aa17.07■□□□□ 0.32
CDH1-202ENST00000422392 VCAM1P19320 739 aa17.07■□□□□ 0.32
CDH1-202ENST00000422392 KIF22Q14807 665 aa17.07■□□□□ 0.32
CDH1-202ENST00000422392 DUPD1Q68J44 220 aa17.07■□□□□ 0.32
CDH1-202ENST00000422392 PADI6Q6TGC4 694 aa17.07■□□□□ 0.32
CDH1-202ENST00000422392 JAMLQ86YT9 394 aa17.07■□□□□ 0.32
CDH1-202ENST00000422392 RPUSD2Q8IZ73 545 aaKnown RBP17.07■□□□□ 0.32
CDH1-202ENST00000422392 ZDHHC18Q9NUE0 388 aa17.07■□□□□ 0.32
CDH1-202ENST00000422392 SEL1LQ9UBV2 794 aa17.07■□□□□ 0.32
CDH1-202ENST00000422392 DDX20Q9UHI6 824 aaKnown RBP17.07■□□□□ 0.32
CDH1-202ENST00000422392 PNMA2Q9UL42 364 aa17.07■□□□□ 0.32
CDH1-202ENST00000422392 MESDQ14696 234 aa17.06■□□□□ 0.32
CDH1-202ENST00000422392 GRIPAP1Q4V328 841 aa17.06■□□□□ 0.32
CDH1-202ENST00000422392 STXBP4Q6ZWJ1 553 aa17.06■□□□□ 0.32
CDH1-202ENST00000422392 GLIS2Q9BZE0 524 aaPredicted RBP17.06■□□□□ 0.32
CDH1-202ENST00000422392 RAB17Q9H0T7 212 aa17.06■□□□□ 0.32
CDH1-202ENST00000422392 ODF2LQ9ULJ1 636 aa17.06■□□□□ 0.32
CDH1-202ENST00000422392 PHF20L1A8MW92 1017 aa17.06■□□□□ 0.32
CDH1-202ENST00000422392 PPFIA2O75334 1257 aa17.06■□□□□ 0.32
CDH1-202ENST00000422392 VIL1P09327 827 aaKnown RBP17.06■□□□□ 0.32
CDH1-202ENST00000422392 AGBL2Q5U5Z8 902 aa17.06■□□□□ 0.32
CDH1-202ENST00000422392 MICALCLQ6ZW33 695 aa17.06■□□□□ 0.32
CDH1-202ENST00000422392 PLCD3Q8N3E9 789 aa17.06■□□□□ 0.32
CDH1-202ENST00000422392 PLEKHO2Q8TD55 490 aa17.06■□□□□ 0.32
CDH1-202ENST00000422392 PAGR1Q9BTK6 254 aa17.06■□□□□ 0.32
CDH1-202ENST00000422392 TEKT3Q9BXF9 490 aa17.06■□□□□ 0.32
CDH1-202ENST00000422392 TXLNGYQ9BZA5 131 aa17.06■□□□□ 0.32
CDH1-202ENST00000422392 ARHGEF10LQ9HCE6 1279 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms