RNA–Protein interactions for RNA: ENST00000421968.6

UFD1-203, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 3

Gene UFD1, Length 670 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-203ENST00000421968 NEUROG3Q9Y4Z2 214 aa13.67□□□□□ -0.22
UFD1-203ENST00000421968 ACACAQ13085 2346 aa13.66□□□□□ -0.22
UFD1-203ENST00000421968 FOXP2O15409 715 aa13.66□□□□□ -0.22
UFD1-203ENST00000421968 ANP32CO43423 234 aa13.66□□□□□ -0.22
UFD1-203ENST00000421968 PPP1R11O60927 126 aaPredicted RBP13.66□□□□□ -0.22
UFD1-203ENST00000421968 SEC24BO95487 1268 aa13.66□□□□□ -0.22
UFD1-203ENST00000421968 SPATA31D3P0C874 917 aa13.66□□□□□ -0.22
UFD1-203ENST00000421968 AK2P54819 239 aa13.66□□□□□ -0.22
UFD1-203ENST00000421968 SATB1Q01826 763 aa13.66□□□□□ -0.22
UFD1-203ENST00000421968 HEATR6Q6AI08 1181 aaKnown RBP13.66□□□□□ -0.22
UFD1-203ENST00000421968 SPATA31D4Q6ZUB0 917 aa13.66□□□□□ -0.22
UFD1-203ENST00000421968 LONP2Q86WA8 852 aa13.66□□□□□ -0.22
UFD1-203ENST00000421968 PROSER1Q86XN7 944 aa13.66□□□□□ -0.22
UFD1-203ENST00000421968 PCYT2Q99447 389 aa13.66□□□□□ -0.22
UFD1-203ENST00000421968 KXD1Q9BQD3 176 aa13.66□□□□□ -0.22
UFD1-203ENST00000421968 PHF20Q9BVI0 1012 aa13.66□□□□□ -0.22
UFD1-203ENST00000421968 SMOC1Q9H4F8 434 aa13.66□□□□□ -0.22
UFD1-203ENST00000421968 ECHDC1Q9NTX5 307 aa13.66□□□□□ -0.22
UFD1-203ENST00000421968 TENM4Q6N022 2769 aa13.66□□□□□ -0.22
UFD1-203ENST00000421968 SPTA1P02549 2419 aa13.66□□□□□ -0.22
UFD1-203ENST00000421968 FRMPD4Q14CM0 1322 aa13.65□□□□□ -0.22
UFD1-203ENST00000421968 TEX28O15482 410 aa13.65□□□□□ -0.22
UFD1-203ENST00000421968 PARP1P09874 1014 aaKnown RBP13.65□□□□□ -0.22
UFD1-203ENST00000421968 KCNA2P16389 499 aa13.65□□□□□ -0.22
UFD1-203ENST00000421968 ZNF598Q86UK7 904 aaKnown RBP13.65□□□□□ -0.22
UFD1-203ENST00000421968 ZKSCAN3Q9BRR0 538 aa13.65□□□□□ -0.22
UFD1-203ENST00000421968 PRKD2Q9BZL6 878 aa13.65□□□□□ -0.22
UFD1-203ENST00000421968 GBP3Q9H0R5 595 aa13.65□□□□□ -0.22
UFD1-203ENST00000421968 ADAMTS10Q9H324 1103 aa13.65□□□□□ -0.22
UFD1-203ENST00000421968 NRDE2Q9H7Z3 1164 aa13.65□□□□□ -0.22
UFD1-203ENST00000421968 PKD2L1Q9P0L9 805 aa13.65□□□□□ -0.22
UFD1-203ENST00000421968 STK39Q9UEW8 545 aa13.65□□□□□ -0.22
UFD1-203ENST00000421968 MSRB2Q9Y3D2 182 aa13.65□□□□□ -0.22
UFD1-203ENST00000421968 TICRRQ7Z2Z1 1910 aa13.64□□□□□ -0.23
UFD1-203ENST00000421968 HYAL3O43820 417 aaPredicted RBP13.64□□□□□ -0.23
UFD1-203ENST00000421968 HMMRO75330 724 aa13.64□□□□□ -0.23
UFD1-203ENST00000421968 URODP06132 367 aa13.64□□□□□ -0.23
UFD1-203ENST00000421968 RLBP1P12271 317 aa13.64□□□□□ -0.23
UFD1-203ENST00000421968 SLC11A1P49279 550 aa13.64□□□□□ -0.23
UFD1-203ENST00000421968 RNASELQ05823 741 aaKnown RBP13.64□□□□□ -0.23
UFD1-203ENST00000421968 TROAPQ12815 778 aa13.64□□□□□ -0.23
UFD1-203ENST00000421968 LOXL4Q96JB6 756 aa13.64□□□□□ -0.23
UFD1-203ENST00000421968 KAT14Q9H8E8 782 aa13.64□□□□□ -0.23
UFD1-203ENST00000421968 LMAN1LQ9HAT1 526 aa13.64□□□□□ -0.23
UFD1-203ENST00000421968 MTCL1Q9Y4B5 1905 aaKnown RBP13.64□□□□□ -0.23
UFD1-203ENST00000421968 A0A0U1RQF3 1178 aa13.63□□□□□ -0.23
UFD1-203ENST00000421968 SHISA7A6NL88 538 aa13.63□□□□□ -0.23
UFD1-203ENST00000421968 C4orf47A7E2U8 309 aa13.63□□□□□ -0.23
UFD1-203ENST00000421968 ZBTB5O15062 677 aa13.63□□□□□ -0.23
UFD1-203ENST00000421968 EPN2O95208 641 aa13.63□□□□□ -0.23
UFD1-203ENST00000421968 CEACAM1P13688 526 aa13.63□□□□□ -0.23
UFD1-203ENST00000421968 ZMYM1Q5SVZ6 1142 aa13.63□□□□□ -0.23
UFD1-203ENST00000421968 DAB2IPQ5VWQ8 1189 aa13.63□□□□□ -0.23
UFD1-203ENST00000421968 PCNX4Q63HM2 1172 aa13.63□□□□□ -0.23
UFD1-203ENST00000421968 LARP1BQ659C4 914 aaKnown RBP13.63□□□□□ -0.23
UFD1-203ENST00000421968 DGKHQ86XP1 1220 aa13.63□□□□□ -0.23
UFD1-203ENST00000421968 ZNF687Q8N1G0 1237 aa13.63□□□□□ -0.23
UFD1-203ENST00000421968 HDAC7Q8WUI4 952 aa13.63□□□□□ -0.23
UFD1-203ENST00000421968 FGF13Q92913 245 aa13.63□□□□□ -0.23
UFD1-203ENST00000421968 CDHR1Q96JP9 859 aa13.63□□□□□ -0.23
UFD1-203ENST00000421968 RPS6KC1Q96S38 1066 aa13.63□□□□□ -0.23
UFD1-203ENST00000421968 EDEM2Q9BV94 578 aa13.63□□□□□ -0.23
UFD1-203ENST00000421968 PLEKHA4Q9H4M7 779 aa13.63□□□□□ -0.23
UFD1-203ENST00000421968 TBC1D13Q9NVG8 400 aa13.63□□□□□ -0.23
UFD1-203ENST00000421968 ZDHHC7Q9NXF8 308 aa13.63□□□□□ -0.23
UFD1-203ENST00000421968 DNAJB4Q9UDY4 337 aa13.63□□□□□ -0.23
UFD1-203ENST00000421968 KLK13Q9UKR3 277 aa13.63□□□□□ -0.23
UFD1-203ENST00000421968 MAN2B1O00754 1011 aa13.62□□□□□ -0.23
UFD1-203ENST00000421968 GAS2O43903 313 aaKnown RBP13.62□□□□□ -0.23
UFD1-203ENST00000421968 PAPLNO95428 1278 aa13.62□□□□□ -0.23
UFD1-203ENST00000421968 VTNP04004 478 aa13.62□□□□□ -0.23
UFD1-203ENST00000421968 STAT5BP51692 787 aa13.62□□□□□ -0.23
UFD1-203ENST00000421968 PLA2G2CQ5R387 149 aa13.62□□□□□ -0.23
UFD1-203ENST00000421968 VPS53Q5VIR6 699 aa13.62□□□□□ -0.23
UFD1-203ENST00000421968 TSHZ3Q63HK5 1081 aa13.62□□□□□ -0.23
UFD1-203ENST00000421968 GRASPQ7Z6J2 395 aaPredicted RBP13.62□□□□□ -0.23
UFD1-203ENST00000421968 PALB2Q86YC2 1186 aa13.62□□□□□ -0.23
UFD1-203ENST00000421968 GPRASP2Q96D09 838 aa13.62□□□□□ -0.23
UFD1-203ENST00000421968 MKNK1Q9BUB5 465 aa13.62□□□□□ -0.23
UFD1-203ENST00000421968 SSX2IPQ9Y2D8 614 aa13.62□□□□□ -0.23
UFD1-203ENST00000421968 INPP5FQ9Y2H2 1132 aa13.62□□□□□ -0.23
UFD1-203ENST00000421968 ZNF462Q96JM2 2506 aa13.62□□□□□ -0.23
UFD1-203ENST00000421968 SMARCA5O60264 1052 aaPredicted RBP13.61□□□□□ -0.23
UFD1-203ENST00000421968 GPR32O75388 356 aa13.61□□□□□ -0.23
UFD1-203ENST00000421968 NTHL1P78549 312 aa13.61□□□□□ -0.23
UFD1-203ENST00000421968 TRAF1Q13077 416 aa13.61□□□□□ -0.23
UFD1-203ENST00000421968 LONRF3Q496Y0 759 aa13.61□□□□□ -0.23
UFD1-203ENST00000421968 TCEAL6Q6IPX3 200 aa13.61□□□□□ -0.23
UFD1-203ENST00000421968 PLPPR4Q7Z2D5 763 aa13.61□□□□□ -0.23
UFD1-203ENST00000421968 HOMER1Q86YM7 354 aa13.61□□□□□ -0.23
UFD1-203ENST00000421968 HNRNPLLQ8WVV9 542 aaKnown RBP13.61□□□□□ -0.23
UFD1-203ENST00000421968 RSPH1Q8WYR4 309 aa13.61□□□□□ -0.23
UFD1-203ENST00000421968 TCEAL3Q969E4 200 aa13.61□□□□□ -0.23
UFD1-203ENST00000421968 HNRNPABQ99729 332 aaKnown RBP13.61□□□□□ -0.23
UFD1-203ENST00000421968 VPS45Q9NRW7 570 aa13.61□□□□□ -0.23
UFD1-203ENST00000421968 BAZ2BQ9UIF8 2168 aaKnown RBP13.61□□□□□ -0.23
UFD1-203ENST00000421968 APC2O95996 2303 aa13.61□□□□□ -0.23
UFD1-203ENST00000421968 CACNA1EQ15878 2313 aa13.61□□□□□ -0.23
UFD1-203ENST00000421968 FREM2Q5SZK8 3169 aa13.6□□□□□ -0.23
UFD1-203ENST00000421968 SOD2P04179 222 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms