RNA–Protein interactions for RNA: ENST00000421939.5

CDK9-202, Transcript of cyclin dependent kinase 9, humanhuman

TSL 3

Gene CDK9, Length 702 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-202ENST00000421939 LRRIQ4A6NIV6 560 aa29.27■■■□□ 2.28
CDK9-202ENST00000421939 INO80B-WBP1J3KQ70 363 aa29.27■■■□□ 2.28
CDK9-202ENST00000421939 EYA4O95677 639 aa29.27■■■□□ 2.28
CDK9-202ENST00000421939 SKIP12755 728 aa29.27■■■□□ 2.28
CDK9-202ENST00000421939 RAB27AP51159 221 aa29.27■■■□□ 2.28
CDK9-202ENST00000421939 MBTD1Q05BQ5 628 aa29.27■■■□□ 2.28
CDK9-202ENST00000421939 ZRSR1Q15695 479 aaKnown RBP29.27■■■□□ 2.28
CDK9-202ENST00000421939 HYIQ5T013 277 aa29.27■■■□□ 2.28
CDK9-202ENST00000421939 PHF6Q8IWS0 365 aaKnown RBP eCLIP29.27■■■□□ 2.28
CDK9-202ENST00000421939 ABI1Q8IZP0 508 aa29.27■■■□□ 2.28
CDK9-202ENST00000421939 AK8Q96MA6 479 aa29.27■■■□□ 2.28
CDK9-202ENST00000421939 FAM105AQ9NUU6 356 aa29.27■■■□□ 2.28
CDK9-202ENST00000421939 E9PMD0 336 aa29.26■■■□□ 2.27
CDK9-202ENST00000421939 TSPAN1O60635 241 aa29.26■■■□□ 2.27
CDK9-202ENST00000421939 HOXA11P31270 313 aaPredicted RBP29.26■■■□□ 2.27
CDK9-202ENST00000421939 PTPROQ16827 1216 aa29.26■■■□□ 2.27
CDK9-202ENST00000421939 MRPL38Q96DV4 380 aaKnown RBP29.26■■■□□ 2.27
CDK9-202ENST00000421939 CLIC4Q9Y696 253 aa29.26■■■□□ 2.27
CDK9-202ENST00000421939 CLLU1OSQ5K130 101 aa29.25■■■□□ 2.27
CDK9-202ENST00000421939 FAM173BQ6P4H8 233 aa29.25■■■□□ 2.27
CDK9-202ENST00000421939 KCNK18Q7Z418 384 aa29.25■■■□□ 2.27
CDK9-202ENST00000421939 CDK5RAP3Q96JB5 506 aa29.25■■■□□ 2.27
CDK9-202ENST00000421939 CASD1Q96PB1 797 aa29.25■■■□□ 2.27
CDK9-202ENST00000421939 PNMA5Q96PV4 448 aa29.25■■■□□ 2.27
CDK9-202ENST00000421939 NT5C3AQ9H0P0 336 aa29.25■■■□□ 2.27
CDK9-202ENST00000421939 ZSCAN16Q9H4T2 348 aaPredicted RBP29.25■■■□□ 2.27
CDK9-202ENST00000421939 SPOUT1Q5T280 376 aaKnown RBP29.24■■■□□ 2.27
CDK9-202ENST00000421939 CDCA2Q69YH5 1023 aaPredicted RBP29.24■■■□□ 2.27
CDK9-202ENST00000421939 CABP7Q86V35 215 aa29.24■■■□□ 2.27
CDK9-202ENST00000421939 ZBTB8OSQ8IWT0 167 aa29.24■■■□□ 2.27
CDK9-202ENST00000421939 LRRC43Q8N309 656 aa29.24■■■□□ 2.27
CDK9-202ENST00000421939 KCTD17Q8N5Z5 321 aa29.24■■■□□ 2.27
CDK9-202ENST00000421939 BSNDQ8WZ55 320 aa29.24■■■□□ 2.27
CDK9-202ENST00000421939 CCDC51Q96ER9 411 aa29.24■■■□□ 2.27
CDK9-202ENST00000421939 HCSTQ9UBK5 93 aa29.24■■■□□ 2.27
CDK9-202ENST00000421939 SLC26A4O43511 780 aa29.23■■■□□ 2.27
CDK9-202ENST00000421939 ZNF623O75123 536 aa29.23■■■□□ 2.27
CDK9-202ENST00000421939 AXLP30530 894 aa29.23■■■□□ 2.27
CDK9-202ENST00000421939 NCBP1Q09161 790 aaKnown RBP29.23■■■□□ 2.27
CDK9-202ENST00000421939 PTPAQ15257 358 aa29.23■■■□□ 2.27
CDK9-202ENST00000421939 AMHR2Q16671 573 aa29.23■■■□□ 2.27
CDK9-202ENST00000421939 TMEM119Q4V9L6 283 aa29.23■■■□□ 2.27
CDK9-202ENST00000421939 HELQQ8TDG4 1101 aa29.23■■■□□ 2.27
CDK9-202ENST00000421939 KIFAP3Q92845 792 aa29.23■■■□□ 2.27
CDK9-202ENST00000421939 P2RX5Q93086 422 aa29.23■■■□□ 2.27
CDK9-202ENST00000421939 PRDM6Q9NQX0 595 aa29.23■■■□□ 2.27
CDK9-202ENST00000421939 AAASQ9NRG9 546 aa29.23■■■□□ 2.27
CDK9-202ENST00000421939 TYW1Q9NV66 732 aaKnown RBP29.23■■■□□ 2.27
CDK9-202ENST00000421939 PCDHB2Q9Y5E7 798 aa29.23■■■□□ 2.27
CDK9-202ENST00000421939 LONP1P36776 959 aaKnown RBP29.22■■■□□ 2.27
CDK9-202ENST00000421939 UBA7P41226 1012 aa29.22■■■□□ 2.27
CDK9-202ENST00000421939 NAMPTP43490 491 aa29.22■■■□□ 2.27
CDK9-202ENST00000421939 GRIN1Q05586 938 aa29.22■■■□□ 2.27
CDK9-202ENST00000421939 PPP2R5AQ15172 486 aa29.22■■■□□ 2.27
CDK9-202ENST00000421939 NAALADL2Q58DX5 795 aa29.22■■■□□ 2.27
CDK9-202ENST00000421939 UBXN11Q5T124 520 aa29.22■■■□□ 2.27
CDK9-202ENST00000421939 NOTUMQ6P988 496 aa29.22■■■□□ 2.27
CDK9-202ENST00000421939 LPPQ93052 612 aa29.22■■■□□ 2.27
CDK9-202ENST00000421939 RUSC1Q9BVN2 902 aa29.22■■■□□ 2.27
CDK9-202ENST00000421939 LMAN2LQ9H0V9 348 aa29.22■■■□□ 2.27
CDK9-202ENST00000421939 C2orf40Q9H1Z8 148 aa29.22■■■□□ 2.27
CDK9-202ENST00000421939 GRM6O15303 877 aa29.21■■■□□ 2.27
CDK9-202ENST00000421939 SKIV2LQ15477 1246 aaKnown RBP29.21■■■□□ 2.27
CDK9-202ENST00000421939 TIGD5Q53EQ6 642 aa29.21■■■□□ 2.27
CDK9-202ENST00000421939 RSPH1Q8WYR4 309 aa29.21■■■□□ 2.27
CDK9-202ENST00000421939 CPB2Q96IY4 423 aa29.21■■■□□ 2.27
CDK9-202ENST00000421939 IFT74Q96LB3 600 aa29.21■■■□□ 2.27
CDK9-202ENST00000421939 PLIN2Q99541 437 aa29.21■■■□□ 2.27
CDK9-202ENST00000421939 CWH43Q9H720 699 aa29.21■■■□□ 2.27
CDK9-202ENST00000421939 PCDHB12Q9Y5F1 795 aa29.21■■■□□ 2.27
CDK9-202ENST00000421939 ARF4P18085 180 aaPredicted RBP29.2■■■□□ 2.26
CDK9-202ENST00000421939 LAG3P18627 525 aa29.2■■■□□ 2.26
CDK9-202ENST00000421939 LONRF3Q496Y0 759 aa29.2■■■□□ 2.26
CDK9-202ENST00000421939 PPP4R3CPQ6ZMV5 832 aa29.2■■■□□ 2.26
CDK9-202ENST00000421939 KLHL23Q8NBE8 558 aa29.2■■■□□ 2.26
CDK9-202ENST00000421939 DEPTORQ8TB45 409 aa29.2■■■□□ 2.26
CDK9-202ENST00000421939 PGBD4Q96DM1 585 aa29.2■■■□□ 2.26
CDK9-202ENST00000421939 MRPL9Q9BYD2 267 aaKnown RBP29.2■■■□□ 2.26
CDK9-202ENST00000421939 PRMT7Q9NVM4 692 aaPredicted RBP29.2■■■□□ 2.26
CDK9-202ENST00000421939 THEGQ9P2T0 379 aa29.2■■■□□ 2.26
CDK9-202ENST00000421939 PLAGL2Q9UPG8 496 aa29.2■■■□□ 2.26
CDK9-202ENST00000421939 MEIS3P2A8K0S8 358 aa29.19■■■□□ 2.26
CDK9-202ENST00000421939 B4GALT5O43286 388 aa29.19■■■□□ 2.26
CDK9-202ENST00000421939 CEBPZQ03701 1054 aaKnown RBP29.19■■■□□ 2.26
CDK9-202ENST00000421939 RINT1Q6NUQ1 792 aa29.19■■■□□ 2.26
CDK9-202ENST00000421939 GLB1LQ6UWU2 654 aa29.19■■■□□ 2.26
CDK9-202ENST00000421939 LRRC55Q6ZSA7 311 aa29.19■■■□□ 2.26
CDK9-202ENST00000421939 C1orf186Q6ZWK4 172 aa29.19■■■□□ 2.26
CDK9-202ENST00000421939 COLGALT1Q8NBJ5 622 aa29.19■■■□□ 2.26
CDK9-202ENST00000421939 CALML4Q96GE6 196 aa29.19■■■□□ 2.26
CDK9-202ENST00000421939 PRIMPOLQ96LW4 560 aa29.19■■■□□ 2.26
CDK9-202ENST00000421939 USP28Q96RU2 1077 aa29.19■■■□□ 2.26
CDK9-202ENST00000421939 POLD4Q9HCU8 107 aa29.19■■■□□ 2.26
CDK9-202ENST00000421939 ALG13Q9NP73 1137 aaKnown RBP29.19■■■□□ 2.26
CDK9-202ENST00000421939 SSBP05455 408 aaKnown RBP eCLIP29.18■■■□□ 2.26
CDK9-202ENST00000421939 ITGB1P05556 798 aa29.18■■■□□ 2.26
CDK9-202ENST00000421939 PDIA4P13667 645 aaKnown RBP29.18■■■□□ 2.26
CDK9-202ENST00000421939 MARCKSP29966 332 aaPredicted RBP29.18■■■□□ 2.26
CDK9-202ENST00000421939 FAM187BQ17R55 369 aa29.18■■■□□ 2.26
CDK9-202ENST00000421939 CSPP1Q1MSJ5 1256 aa29.18■■■□□ 2.26
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms