RNA–Protein interactions for RNA: ENST00000421670.3

DDX55-203, Transcript of DEAD-box helicase 55, humanhuman

TSL 1 (best) BASIC

Gene DDX55, Length 1,574 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-203ENST00000421670 CCDC47Q96A33 483 aaKnown RBP17.32■□□□□ 0.36
DDX55-203ENST00000421670 OSBPL7Q9BZF2 842 aa17.32■□□□□ 0.36
DDX55-203ENST00000421670 RMND1Q9NWS8 449 aa17.32■□□□□ 0.36
DDX55-203ENST00000421670 ARHGAP28Q9P2N2 729 aa17.32■□□□□ 0.36
DDX55-203ENST00000421670 GDAQ9Y2T3 454 aa17.32■□□□□ 0.36
DDX55-203ENST00000421670 CEP290O15078 2479 aa17.32■□□□□ 0.36
DDX55-203ENST00000421670 LAMA2P24043 3122 aaKnown RBP17.32■□□□□ 0.36
DDX55-203ENST00000421670 TRIM43BA6NCK2 446 aa17.32■□□□□ 0.36
DDX55-203ENST00000421670 GCNT3O95395 438 aa17.32■□□□□ 0.36
DDX55-203ENST00000421670 MYBP10242 640 aa17.32■□□□□ 0.36
DDX55-203ENST00000421670 SELPP16109 830 aa17.32■□□□□ 0.36
DDX55-203ENST00000421670 CYP2C18P33260 490 aa17.32■□□□□ 0.36
DDX55-203ENST00000421670 PTENP60484 403 aa17.32■□□□□ 0.36
DDX55-203ENST00000421670 MBTPS1Q14703 1052 aa17.32■□□□□ 0.36
DDX55-203ENST00000421670 HAUS6Q7Z4H7 955 aa17.32■□□□□ 0.36
DDX55-203ENST00000421670 ZBTB8OSQ8IWT0 167 aa17.32■□□□□ 0.36
DDX55-203ENST00000421670 TMEM161BQ8NDZ6 487 aa17.32■□□□□ 0.36
DDX55-203ENST00000421670 TRIM43Q96BQ3 446 aaPredicted RBP17.32■□□□□ 0.36
DDX55-203ENST00000421670 HTATIP2Q9BUP3 242 aa17.32■□□□□ 0.36
DDX55-203ENST00000421670 WNT8AQ9H1J5 351 aa17.32■□□□□ 0.36
DDX55-203ENST00000421670 DENND3A2RUS2 1198 aa17.31■□□□□ 0.36
DDX55-203ENST00000421670 FGFR4P22455 802 aa17.31■□□□□ 0.36
DDX55-203ENST00000421670 CRYBB1P53674 252 aaPredicted RBP17.31■□□□□ 0.36
DDX55-203ENST00000421670 CCL23P55773 120 aa17.31■□□□□ 0.36
DDX55-203ENST00000421670 CDC42EP1Q00587 391 aa17.31■□□□□ 0.36
DDX55-203ENST00000421670 MBTD1Q05BQ5 628 aa17.31■□□□□ 0.36
DDX55-203ENST00000421670 FAM26DQ5JW98 314 aa17.31■□□□□ 0.36
DDX55-203ENST00000421670 TAS1R3Q7RTX0 852 aa17.31■□□□□ 0.36
DDX55-203ENST00000421670 SCLYQ96I15 445 aa17.31■□□□□ 0.36
DDX55-203ENST00000421670 NTPCRQ9BSD7 190 aaKnown RBP17.31■□□□□ 0.36
DDX55-203ENST00000421670 NFKBIZQ9BYH8 718 aa17.31■□□□□ 0.36
DDX55-203ENST00000421670 GCOM2Q9BZD3 368 aaPredicted RBP17.31■□□□□ 0.36
DDX55-203ENST00000421670 PHLPP2Q6ZVD8 1323 aa17.3■□□□□ 0.36
DDX55-203ENST00000421670 INO80B-WBP1J3KQ70 363 aa17.3■□□□□ 0.36
DDX55-203ENST00000421670 EDN1P05305 212 aa17.3■□□□□ 0.36
DDX55-203ENST00000421670 IQCF3P0C7M6 154 aa17.3■□□□□ 0.36
DDX55-203ENST00000421670 MAPTP10636 758 aaKnown RBP17.3■□□□□ 0.36
DDX55-203ENST00000421670 GHRP10912 638 aa17.3■□□□□ 0.36
DDX55-203ENST00000421670 DARSP14868 501 aaKnown RBP17.3■□□□□ 0.36
DDX55-203ENST00000421670 BMP6P22004 513 aa17.3■□□□□ 0.36
DDX55-203ENST00000421670 EIF4BP23588 611 aaKnown RBP17.3■□□□□ 0.36
DDX55-203ENST00000421670 ITGB8P26012 769 aa17.3■□□□□ 0.36
DDX55-203ENST00000421670 POU5F1BQ06416 359 aa17.3■□□□□ 0.36
DDX55-203ENST00000421670 ZNF720Q7Z2F6 126 aa17.3■□□□□ 0.36
DDX55-203ENST00000421670 INO80BQ9C086 356 aaPredicted RBP17.3■□□□□ 0.36
DDX55-203ENST00000421670 CCDC113Q9H0I3 377 aa17.3■□□□□ 0.36
DDX55-203ENST00000421670 C2orf40Q9H1Z8 148 aa17.3■□□□□ 0.36
DDX55-203ENST00000421670 MAPK8IP1Q9UQF2 711 aa17.3■□□□□ 0.36
DDX55-203ENST00000421670 KIAA0355O15063 1070 aa17.29■□□□□ 0.36
DDX55-203ENST00000421670 EVI5O60447 810 aa17.29■□□□□ 0.36
DDX55-203ENST00000421670 PPP1R37O75864 691 aa17.29■□□□□ 0.36
DDX55-203ENST00000421670 KCNA1Q09470 495 aa17.29■□□□□ 0.36
DDX55-203ENST00000421670 PSMD2Q13200 908 aa17.29■□□□□ 0.36
DDX55-203ENST00000421670 MORC3Q14149 939 aa17.29■□□□□ 0.36
DDX55-203ENST00000421670 FBXO47Q5MNV8 452 aa17.29■□□□□ 0.36
DDX55-203ENST00000421670 ZNF658Q5TYW1 1059 aaPredicted RBP17.29■□□□□ 0.36
DDX55-203ENST00000421670 IFNLR1Q8IU57 520 aaPredicted RBP17.29■□□□□ 0.36
DDX55-203ENST00000421670 ZNF710Q8N1W2 664 aa17.29■□□□□ 0.36
DDX55-203ENST00000421670 IKZF4Q9H2S9 585 aa17.29■□□□□ 0.36
DDX55-203ENST00000421670 USP20Q9Y2K6 914 aa17.29■□□□□ 0.36
DDX55-203ENST00000421670 NOC2LQ9Y3T9 749 aaKnown RBP17.29■□□□□ 0.36
DDX55-203ENST00000421670 MICAL3Q7RTP6 2002 aa17.28■□□□□ 0.36
DDX55-203ENST00000421670 SYCE3A1L190 88 aa17.28■□□□□ 0.36
DDX55-203ENST00000421670 K7ERI5 159 aa17.28■□□□□ 0.36
DDX55-203ENST00000421670 PRPF6O94906 941 aaKnown RBP17.28■□□□□ 0.36
DDX55-203ENST00000421670 PRKCBP05771 671 aa17.28■□□□□ 0.36
DDX55-203ENST00000421670 RAG1P15918 1043 aa17.28■□□□□ 0.36
DDX55-203ENST00000421670 EFNA5P52803 228 aa17.28■□□□□ 0.36
DDX55-203ENST00000421670 GTF2BQ00403 316 aa17.28■□□□□ 0.36
DDX55-203ENST00000421670 LPIN1Q14693 890 aa17.28■□□□□ 0.36
DDX55-203ENST00000421670 ZSCAN23Q3MJ62 389 aa17.28■□□□□ 0.36
DDX55-203ENST00000421670 EPM2AIP1Q7L775 607 aaPredicted RBP17.28■□□□□ 0.36
DDX55-203ENST00000421670 SRGAP1Q7Z6B7 1085 aa17.28■□□□□ 0.36
DDX55-203ENST00000421670 FAM228AQ86W67 206 aa17.28■□□□□ 0.36
DDX55-203ENST00000421670 SLC17A8Q8NDX2 589 aa17.28■□□□□ 0.36
DDX55-203ENST00000421670 SCFD1Q8WVM8 642 aa17.28■□□□□ 0.36
DDX55-203ENST00000421670 DPF3Q92784 378 aa17.28■□□□□ 0.36
DDX55-203ENST00000421670 STRA6Q9BX79 667 aa17.28■□□□□ 0.36
DDX55-203ENST00000421670 GZF1Q9H116 711 aaPredicted RBP17.28■□□□□ 0.36
DDX55-203ENST00000421670 ST6GALNAC4Q9H4F1 302 aa17.28■□□□□ 0.36
DDX55-203ENST00000421670 AGO3Q9H9G7 860 aaKnown RBP17.28■□□□□ 0.36
DDX55-203ENST00000421670 KCNG1Q9UIX4 513 aa17.28■□□□□ 0.36
DDX55-203ENST00000421670 RANBP2P49792 3224 aaKnown RBP17.28■□□□□ 0.36
DDX55-203ENST00000421670 ZMYM2Q9UBW7 1377 aa17.28■□□□□ 0.36
DDX55-203ENST00000421670 TTLL13PA6NNM8 815 aa17.28■□□□□ 0.36
DDX55-203ENST00000421670 H0YCG3 227 aa17.28■□□□□ 0.36
DDX55-203ENST00000421670 B4GALT5O43286 388 aa17.28■□□□□ 0.36
DDX55-203ENST00000421670 NBNO60934 754 aa17.28■□□□□ 0.36
DDX55-203ENST00000421670 RPS6KA5O75582 802 aa17.28■□□□□ 0.36
DDX55-203ENST00000421670 TIMP1P01033 207 aa17.28■□□□□ 0.36
DDX55-203ENST00000421670 CD52P31358 61 aa17.28■□□□□ 0.36
DDX55-203ENST00000421670 MAPK6Q16659 721 aa17.28■□□□□ 0.36
DDX55-203ENST00000421670 AMHR2Q16671 573 aa17.28■□□□□ 0.36
DDX55-203ENST00000421670 NELFCDQ8IXH7 590 aa17.28■□□□□ 0.36
DDX55-203ENST00000421670 TRIML1Q8N9V2 468 aa17.28■□□□□ 0.36
DDX55-203ENST00000421670 PRKAG2Q9UGJ0 569 aa17.28■□□□□ 0.36
DDX55-203ENST00000421670 TBX20Q9UMR3 447 aa17.28■□□□□ 0.36
DDX55-203ENST00000421670 EIF3DO15371 548 aaKnown RBP eCLIP17.27■□□□□ 0.35
DDX55-203ENST00000421670 SYN1P17600 705 aa17.27■□□□□ 0.35
DDX55-203ENST00000421670 SFPQP23246 707 aaKnown RBP eCLIP17.27■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms