RNA–Protein interactions for RNA: ENST00000421263.1

VARS2-202, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2

Gene VARS2, Length 460 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-202ENST00000421263 SRGAP1Q7Z6B7 1085 aa21.15■□□□□ 0.98
VARS2-202ENST00000421263 SLFN12Q8IYM2 578 aa21.15■□□□□ 0.98
VARS2-202ENST00000421263 NECAB1Q8N987 351 aa21.15■□□□□ 0.98
VARS2-202ENST00000421263 PRPF31Q8WWY3 499 aaKnown RBP21.15■□□□□ 0.98
VARS2-202ENST00000421263 GTF3C6Q969F1 213 aa21.15■□□□□ 0.98
VARS2-202ENST00000421263 NLRP4Q96MN2 994 aa21.15■□□□□ 0.98
VARS2-202ENST00000421263 LXNQ9BS40 222 aa21.15■□□□□ 0.98
VARS2-202ENST00000421263 ENTPD7Q9NQZ7 604 aa21.15■□□□□ 0.98
VARS2-202ENST00000421263 RGL1Q9NZL6 768 aa21.15■□□□□ 0.98
VARS2-202ENST00000421263 PIN4Q9Y237 131 aaKnown RBP21.15■□□□□ 0.98
VARS2-202ENST00000421263 MEIS3P2A8K0S8 358 aa21.14■□□□□ 0.97
VARS2-202ENST00000421263 ASAP2O43150 1006 aa21.14■□□□□ 0.97
VARS2-202ENST00000421263 OFD1O75665 1012 aa21.14■□□□□ 0.97
VARS2-202ENST00000421263 BAG4O95429 457 aaKnown RBP21.14■□□□□ 0.97
VARS2-202ENST00000421263 YWHABP31946 246 aaKnown RBP21.14■□□□□ 0.97
VARS2-202ENST00000421263 KRT2P35908 639 aa21.14■□□□□ 0.97
VARS2-202ENST00000421263 ALDH7A1P49419 539 aaKnown RBP21.14■□□□□ 0.97
VARS2-202ENST00000421263 RAB27AP51159 221 aa21.14■□□□□ 0.97
VARS2-202ENST00000421263 OTUD6AQ7L8S5 288 aa21.14■□□□□ 0.97
VARS2-202ENST00000421263 LPPQ93052 612 aa21.14■□□□□ 0.97
VARS2-202ENST00000421263 TMEM143Q96AN5 459 aa21.14■□□□□ 0.97
VARS2-202ENST00000421263 DYDC2Q96IM9 177 aa21.14■□□□□ 0.97
VARS2-202ENST00000421263 ZSWIM4Q9H7M6 989 aa21.14■□□□□ 0.97
VARS2-202ENST00000421263 MINDY3Q9H8M7 445 aa21.14■□□□□ 0.97
VARS2-202ENST00000421263 AGPAT5Q9NUQ2 364 aa21.14■□□□□ 0.97
VARS2-202ENST00000421263 CARNS1A5YM72 827 aa21.13■□□□□ 0.97
VARS2-202ENST00000421263 C2orf71A6NGG8 1288 aa21.13■□□□□ 0.97
VARS2-202ENST00000421263 NT5C1B-RDH14C9J2C7 533 aa21.13■□□□□ 0.97
VARS2-202ENST00000421263 ZBTB39O15060 712 aa21.13■□□□□ 0.97
VARS2-202ENST00000421263 GAS2O43903 313 aaKnown RBP21.13■□□□□ 0.97
VARS2-202ENST00000421263 MARCH6O60337 910 aa21.13■□□□□ 0.97
VARS2-202ENST00000421263 SRGAP2BP0DMP2 458 aa21.13■□□□□ 0.97
VARS2-202ENST00000421263 HOXB8P17481 243 aaPredicted RBP21.13■□□□□ 0.97
VARS2-202ENST00000421263 HOXA11P31270 313 aaPredicted RBP21.13■□□□□ 0.97
VARS2-202ENST00000421263 TECP42680 631 aa21.13■□□□□ 0.97
VARS2-202ENST00000421263 POLGP54098 1239 aaPredicted RBP21.13■□□□□ 0.97
VARS2-202ENST00000421263 SMC1AQ14683 1233 aaKnown RBP21.13■□□□□ 0.97
VARS2-202ENST00000421263 NCAPH2Q6IBW4 605 aa21.13■□□□□ 0.97
VARS2-202ENST00000421263 MRPL10Q7Z7H8 261 aaKnown RBP21.13■□□□□ 0.97
VARS2-202ENST00000421263 NSUN7Q8NE18 718 aaKnown RBP21.13■□□□□ 0.97
VARS2-202ENST00000421263 PSPC1Q8WXF1 523 aaKnown RBP21.13■□□□□ 0.97
VARS2-202ENST00000421263 EDAQ92838 391 aa21.13■□□□□ 0.97
VARS2-202ENST00000421263 HSD17B14Q9BPX1 270 aa21.13■□□□□ 0.97
VARS2-202ENST00000421263 NRDE2Q9H7Z3 1164 aa21.13■□□□□ 0.97
VARS2-202ENST00000421263 TBC1D13Q9NVG8 400 aa21.13■□□□□ 0.97
VARS2-202ENST00000421263 SRGAP2CP0DJJ0 459 aa21.12■□□□□ 0.97
VARS2-202ENST00000421263 LAMTOR4Q0VGL1 99 aa21.12■□□□□ 0.97
VARS2-202ENST00000421263 CTTNQ14247 550 aaKnown RBP21.12■□□□□ 0.97
VARS2-202ENST00000421263 NOMO2Q5JPE7 1267 aa21.12■□□□□ 0.97
VARS2-202ENST00000421263 GLB1LQ6UWU2 654 aa21.12■□□□□ 0.97
VARS2-202ENST00000421263 AGMOQ6ZNB7 445 aa21.12■□□□□ 0.97
VARS2-202ENST00000421263 FERMT3Q86UX7 667 aa21.12■□□□□ 0.97
VARS2-202ENST00000421263 TCP11Q8WWU5 503 aa21.12■□□□□ 0.97
VARS2-202ENST00000421263 PGBD4Q96DM1 585 aa21.12■□□□□ 0.97
VARS2-202ENST00000421263 PCDHA12Q9UN75 941 aa21.12■□□□□ 0.97
VARS2-202ENST00000421263 PCDHB2Q9Y5E7 798 aa21.12■□□□□ 0.97
VARS2-202ENST00000421263 IRAK3Q9Y616 596 aa21.12■□□□□ 0.97
VARS2-202ENST00000421263 BTBD18B2RXH4 712 aa21.11■□□□□ 0.97
VARS2-202ENST00000421263 LYPLA2O95372 231 aa21.11■□□□□ 0.97
VARS2-202ENST00000421263 GALTP07902 379 aa21.11■□□□□ 0.97
VARS2-202ENST00000421263 HOXD11P31277 338 aaPredicted RBP21.11■□□□□ 0.97
VARS2-202ENST00000421263 EMC2Q15006 297 aa21.11■□□□□ 0.97
VARS2-202ENST00000421263 LONRF3Q496Y0 759 aa21.11■□□□□ 0.97
VARS2-202ENST00000421263 XKR9Q5GH70 373 aa21.11■□□□□ 0.97
VARS2-202ENST00000421263 UBXN11Q5T124 520 aa21.11■□□□□ 0.97
VARS2-202ENST00000421263 HFE2Q6ZVN8 426 aa21.11■□□□□ 0.97
VARS2-202ENST00000421263 DDX53Q86TM3 631 aaKnown RBP21.11■□□□□ 0.97
VARS2-202ENST00000421263 TMEM173Q86WV6 379 aaPredicted RBP21.11■□□□□ 0.97
VARS2-202ENST00000421263 TMEM169Q96HH4 297 aa21.11■□□□□ 0.97
VARS2-202ENST00000421263 IGSF21Q96ID5 467 aa21.11■□□□□ 0.97
VARS2-202ENST00000421263 ZBP1Q9H171 429 aa21.11■□□□□ 0.97
VARS2-202ENST00000421263 BRMS1Q9HCU9 246 aa21.11■□□□□ 0.97
VARS2-202ENST00000421263 HCFC2Q9Y5Z7 792 aa21.11■□□□□ 0.97
VARS2-202ENST00000421263 CLASP2O75122 1294 aaKnown RBP21.1■□□□□ 0.97
VARS2-202ENST00000421263 ZC3H11AO75152 810 aaKnown RBP eCLIP21.1■□□□□ 0.97
VARS2-202ENST00000421263 CXCL14O95715 111 aa21.1■□□□□ 0.97
VARS2-202ENST00000421263 NEK4P51957 841 aa21.1■□□□□ 0.97
VARS2-202ENST00000421263 CYP4A11Q02928 519 aa21.1■□□□□ 0.97
VARS2-202ENST00000421263 BMP8AQ7Z5Y6 402 aa21.1■□□□□ 0.97
VARS2-202ENST00000421263 TPH2Q8IWU9 490 aa21.1■□□□□ 0.97
VARS2-202ENST00000421263 CASP10Q92851 521 aa21.1■□□□□ 0.97
VARS2-202ENST00000421263 MTMR9Q96QG7 549 aa21.1■□□□□ 0.97
VARS2-202ENST00000421263 EIF2AK1Q9BQI3 630 aaKnown RBP21.1■□□□□ 0.97
VARS2-202ENST00000421263 XPNPEP1Q9NQW7 623 aa21.1■□□□□ 0.97
VARS2-202ENST00000421263 TECTAO75443 2155 aa21.1■□□□□ 0.97
VARS2-202ENST00000421263 WNT7AO00755 349 aa21.09■□□□□ 0.97
VARS2-202ENST00000421263 EIF5BO60841 1220 aaKnown RBP21.09■□□□□ 0.97
VARS2-202ENST00000421263 CTSAP10619 480 aa21.09■□□□□ 0.97
VARS2-202ENST00000421263 POU5F1BQ06416 359 aa21.09■□□□□ 0.97
VARS2-202ENST00000421263 BMS1Q14692 1282 aaKnown RBP21.09■□□□□ 0.97
VARS2-202ENST00000421263 PCBP1Q15365 356 aaKnown RBP eCLIP21.09■□□□□ 0.97
VARS2-202ENST00000421263 LLGL2Q6P1M3 1020 aa21.09■□□□□ 0.97
VARS2-202ENST00000421263 ZNF280BQ86YH2 543 aa21.09■□□□□ 0.97
VARS2-202ENST00000421263 IFNLR1Q8IU57 520 aaPredicted RBP21.09■□□□□ 0.97
VARS2-202ENST00000421263 VPS52Q8N1B4 723 aa21.09■□□□□ 0.97
VARS2-202ENST00000421263 RNF149Q8NC42 400 aa21.09■□□□□ 0.97
VARS2-202ENST00000421263 RPGRIP1Q96KN7 1286 aa21.09■□□□□ 0.97
VARS2-202ENST00000421263 MTRQ99707 1265 aa21.09■□□□□ 0.97
VARS2-202ENST00000421263 KCNH6Q9H252 994 aa21.09■□□□□ 0.97
VARS2-202ENST00000421263 TTC12Q9H892 705 aaPredicted RBP21.09■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms