RNA–Protein interactions for RNA: ENST00000419974.2

SHMT1P1-201, Transcript of serine hydroxymethyltransferase 1 (soluble) pseudogene 1, humanhuman

BASIC

Gene SHMT1P1, Length 1,312 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1P1-201ENST00000419974 CNGA1P29973 690 aa15.68■□□□□ 0.1
SHMT1P1-201ENST00000419974 STX17P56962 302 aa15.68■□□□□ 0.1
SHMT1P1-201ENST00000419974 PTPN11Q06124 597 aaPredicted RBP15.68■□□□□ 0.1
SHMT1P1-201ENST00000419974 ENPEPQ07075 957 aa15.68■□□□□ 0.1
SHMT1P1-201ENST00000419974 PCBP1Q15365 356 aaKnown RBP eCLIP15.68■□□□□ 0.1
SHMT1P1-201ENST00000419974 EFCAB12Q6NXP0 572 aa15.68■□□□□ 0.1
SHMT1P1-201ENST00000419974 ARHGAP30Q7Z6I6 1101 aaPredicted RBP15.68■□□□□ 0.1
SHMT1P1-201ENST00000419974 RNF180Q86T96 592 aa15.68■□□□□ 0.1
SHMT1P1-201ENST00000419974 RPAINQ86UA6 219 aa15.68■□□□□ 0.1
SHMT1P1-201ENST00000419974 PRPF31Q8WWY3 499 aaKnown RBP15.68■□□□□ 0.1
SHMT1P1-201ENST00000419974 LENG1Q96BZ8 264 aaPredicted RBP15.68■□□□□ 0.1
SHMT1P1-201ENST00000419974 MKNK1Q9BUB5 465 aa15.68■□□□□ 0.1
SHMT1P1-201ENST00000419974 TBC1D7Q9P0N9 293 aa15.68■□□□□ 0.1
SHMT1P1-201ENST00000419974 STYXL1Q9Y6J8 313 aa15.68■□□□□ 0.1
SHMT1P1-201ENST00000419974 TRIM49BA6NDI0 452 aa15.67■□□□□ 0.1
SHMT1P1-201ENST00000419974 MAPK13O15264 365 aa15.67■□□□□ 0.1
SHMT1P1-201ENST00000419974 SLC16A3O15427 465 aaKnown RBP15.67■□□□□ 0.1
SHMT1P1-201ENST00000419974 PRPF6O94906 941 aaKnown RBP15.67■□□□□ 0.1
SHMT1P1-201ENST00000419974 CDC25BP30305 580 aa15.67■□□□□ 0.1
SHMT1P1-201ENST00000419974 LAMTOR4Q0VGL1 99 aa15.67■□□□□ 0.1
SHMT1P1-201ENST00000419974 TFDP1Q14186 410 aa15.67■□□□□ 0.1
SHMT1P1-201ENST00000419974 HSP90AA2PQ14568 343 aaPredicted RBP15.67■□□□□ 0.1
SHMT1P1-201ENST00000419974 TPD52L1Q16890 204 aaPredicted RBP15.67■□□□□ 0.1
SHMT1P1-201ENST00000419974 TCP11X2Q5H9J9 407 aa15.67■□□□□ 0.1
SHMT1P1-201ENST00000419974 NFRKBQ6P4R8 1299 aa15.67■□□□□ 0.1
SHMT1P1-201ENST00000419974 MAEAQ7L5Y9 396 aa15.67■□□□□ 0.1
SHMT1P1-201ENST00000419974 HS2ST1Q7LGA3 356 aa15.67■□□□□ 0.1
SHMT1P1-201ENST00000419974 TRMT1LQ7Z2T5 733 aaKnown RBP15.67■□□□□ 0.1
SHMT1P1-201ENST00000419974 NME8Q8N427 588 aa15.67■□□□□ 0.1
SHMT1P1-201ENST00000419974 ASAP3Q8TDY4 903 aa15.67■□□□□ 0.1
SHMT1P1-201ENST00000419974 LMBR1Q8WVP7 490 aa15.67■□□□□ 0.1
SHMT1P1-201ENST00000419974 TMEM143Q96AN5 459 aa15.67■□□□□ 0.1
SHMT1P1-201ENST00000419974 PPP1R9BQ96SB3 815 aa15.67■□□□□ 0.1
SHMT1P1-201ENST00000419974 SRRTQ9BXP5 876 aaKnown RBP15.67■□□□□ 0.1
SHMT1P1-201ENST00000419974 SAMSN1Q9NSI8 373 aaKnown RBP15.67■□□□□ 0.1
SHMT1P1-201ENST00000419974 SUCLA2Q9P2R7 463 aaPredicted RBP15.67■□□□□ 0.1
SHMT1P1-201ENST00000419974 ADGRA3Q8IWK6 1321 aa15.66■□□□□ 0.1
SHMT1P1-201ENST00000419974 DENND3A2RUS2 1198 aa15.66■□□□□ 0.1
SHMT1P1-201ENST00000419974 MYADML2A6NDP7 307 aa15.66■□□□□ 0.1
SHMT1P1-201ENST00000419974 KIAA0391O15091 583 aaKnown RBP15.66■□□□□ 0.1
SHMT1P1-201ENST00000419974 CETN3O15182 167 aa15.66■□□□□ 0.1
SHMT1P1-201ENST00000419974 SLC16A4O15374 487 aa15.66■□□□□ 0.1
SHMT1P1-201ENST00000419974 AP5Z1O43299 807 aa15.66■□□□□ 0.1
SHMT1P1-201ENST00000419974 PGK1P00558 417 aa15.66■□□□□ 0.1
SHMT1P1-201ENST00000419974 ATP1A3P13637 1013 aa15.66■□□□□ 0.1
SHMT1P1-201ENST00000419974 FANCCQ00597 558 aa15.66■□□□□ 0.1
SHMT1P1-201ENST00000419974 BEX3Q00994 111 aa15.66■□□□□ 0.1
SHMT1P1-201ENST00000419974 CAPSQ13938 189 aa15.66■□□□□ 0.1
SHMT1P1-201ENST00000419974 FAM187BQ17R55 369 aa15.66■□□□□ 0.1
SHMT1P1-201ENST00000419974 ZC2HC1CQ53FD0 456 aaPredicted RBP15.66■□□□□ 0.1
SHMT1P1-201ENST00000419974 ZNF410Q86VK4 478 aa15.66■□□□□ 0.1
SHMT1P1-201ENST00000419974 ANKLE1Q8NAG6 615 aa15.66■□□□□ 0.1
SHMT1P1-201ENST00000419974 ANKRD20A12PQ8NF67 263 aa15.66■□□□□ 0.1
SHMT1P1-201ENST00000419974 DEFB118Q96PH6 123 aa15.66■□□□□ 0.1
SHMT1P1-201ENST00000419974 XRN2Q9H0D6 950 aaKnown RBP eCLIP15.66■□□□□ 0.1
SHMT1P1-201ENST00000419974 CCDC113Q9H0I3 377 aa15.66■□□□□ 0.1
SHMT1P1-201ENST00000419974 POLD4Q9HCU8 107 aa15.66■□□□□ 0.1
SHMT1P1-201ENST00000419974 AGPAT3Q9NRZ7 376 aa15.66■□□□□ 0.1
SHMT1P1-201ENST00000419974 A0A1B0GTH6 734 aa15.65■□□□□ 0.1
SHMT1P1-201ENST00000419974 CCDC169A6NNP5 214 aa15.65■□□□□ 0.1
SHMT1P1-201ENST00000419974 CBFA2T2O43439 604 aa15.65■□□□□ 0.1
SHMT1P1-201ENST00000419974 TFRCP02786 760 aaKnown RBP15.65■□□□□ 0.1
SHMT1P1-201ENST00000419974 MYL3P08590 195 aa15.65■□□□□ 0.1
SHMT1P1-201ENST00000419974 PTENP60484 403 aa15.65■□□□□ 0.1
SHMT1P1-201ENST00000419974 KCNA1Q09470 495 aa15.65■□□□□ 0.1
SHMT1P1-201ENST00000419974 CCDC173Q0VFZ6 552 aa15.65■□□□□ 0.1
SHMT1P1-201ENST00000419974 ADAM9Q13443 819 aa15.65■□□□□ 0.1
SHMT1P1-201ENST00000419974 DRP2Q13474 957 aa15.65■□□□□ 0.1
SHMT1P1-201ENST00000419974 KCNA10Q16322 511 aa15.65■□□□□ 0.1
SHMT1P1-201ENST00000419974 TAF2Q6P1X5 1199 aa15.65■□□□□ 0.1
SHMT1P1-201ENST00000419974 ZPBP2Q6X784 338 aa15.65■□□□□ 0.1
SHMT1P1-201ENST00000419974 TAS1R3Q7RTX0 852 aa15.65■□□□□ 0.1
SHMT1P1-201ENST00000419974 FRMD5Q7Z6J6 570 aa15.65■□□□□ 0.1
SHMT1P1-201ENST00000419974 NELFCDQ8IXH7 590 aa15.65■□□□□ 0.1
SHMT1P1-201ENST00000419974 KIAA0319LQ8IZA0 1049 aa15.65■□□□□ 0.1
SHMT1P1-201ENST00000419974 ARRDC4Q8NCT1 418 aa15.65■□□□□ 0.1
SHMT1P1-201ENST00000419974 DEPTORQ8TB45 409 aa15.65■□□□□ 0.1
SHMT1P1-201ENST00000419974 HTATIP2Q9BUP3 242 aa15.65■□□□□ 0.1
SHMT1P1-201ENST00000419974 FZD8Q9H461 694 aa15.65■□□□□ 0.1
SHMT1P1-201ENST00000419974 GTF2IRD1Q9UHL9 959 aa15.65■□□□□ 0.1
SHMT1P1-201ENST00000419974 SCN10AQ9Y5Y9 1956 aa15.64■□□□□ 0.09
SHMT1P1-201ENST00000419974 KCNJ18B7U540 433 aa15.64■□□□□ 0.09
SHMT1P1-201ENST00000419974 NR3C1P04150 777 aa15.64■□□□□ 0.09
SHMT1P1-201ENST00000419974 TPM3P06753 285 aa15.64■□□□□ 0.09
SHMT1P1-201ENST00000419974 ASGR1P07306 291 aa15.64■□□□□ 0.09
SHMT1P1-201ENST00000419974 CDK11BP21127 795 aaKnown RBP15.64■□□□□ 0.09
SHMT1P1-201ENST00000419974 GARTP22102 1010 aa15.64■□□□□ 0.09
SHMT1P1-201ENST00000419974 ZNF75DP51815 510 aa15.64■□□□□ 0.09
SHMT1P1-201ENST00000419974 PPP2R3AQ06190 1150 aa15.64■□□□□ 0.09
SHMT1P1-201ENST00000419974 KCNJ12Q14500 433 aa15.64■□□□□ 0.09
SHMT1P1-201ENST00000419974 NR1I3Q14994 352 aa15.64■□□□□ 0.09
SHMT1P1-201ENST00000419974 TRAPPC12Q8WVT3 735 aa15.64■□□□□ 0.09
SHMT1P1-201ENST00000419974 BORCS6Q96GS4 357 aa15.64■□□□□ 0.09
SHMT1P1-201ENST00000419974 PRIMPOLQ96LW4 560 aa15.64■□□□□ 0.09
SHMT1P1-201ENST00000419974 FBXL18Q96ME1 805 aa15.64■□□□□ 0.09
SHMT1P1-201ENST00000419974 MAP7D2Q96T17 732 aa15.64■□□□□ 0.09
SHMT1P1-201ENST00000419974 SUGCTQ9HAC7 445 aa15.64■□□□□ 0.09
SHMT1P1-201ENST00000419974 IFT122Q9HBG6 1241 aa15.64■□□□□ 0.09
SHMT1P1-201ENST00000419974 METTL14Q9HCE5 456 aaKnown RBP15.64■□□□□ 0.09
SHMT1P1-201ENST00000419974 SETD4Q9NVD3 440 aa15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms